data_4AN3 # _model_server_result.job_id whClQTiA20be3Q8yyYrBlg _model_server_result.datetime_utc '2024-11-26 15:24:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4an3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1384}' # _entry.id 4AN3 # _exptl.entry_id 4AN3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.193 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(2S)-2,3-bis(oxidanyl)propoxy]-3,4-bis(fluoranyl)-2-[(2-fluoranyl-4-iodanyl-phenyl)amino]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4AN3 _cell.length_a 108.659 _cell.length_b 108.659 _cell.length_c 50.113 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AN3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B MG MG . A MG 1382 1_555 C O1A ATP . A ATP 1383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc2 B MG MG . A MG 1382 1_555 C O1B ATP . A ATP 1383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? # _chem_comp.formula 'C16 H14 F3 I N2 O4' _chem_comp.formula_weight 482.193 _chem_comp.id 5Y0 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(2S)-2,3-bis(oxidanyl)propoxy]-3,4-bis(fluoranyl)-2-[(2-fluoranyl-4-iodanyl-phenyl)amino]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-(2,3-DIHYDROXYPROPOXY)-3,4-DIFLUORO-2-[(2-FLUORO-4-IODOPHENYL)AMINO]BENZAMIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag I20 C16 5Y0 sing 1 n n C17 C18 5Y0 doub 2 n y C17 C16 5Y0 sing 3 n y C18 C13 5Y0 sing 4 n y C18 F19 5Y0 sing 5 n n C13 C14 5Y0 doub 6 n y C13 N9 5Y0 sing 7 n n C14 C15 5Y0 sing 8 n y C15 C16 5Y0 doub 9 n y C24 C25 5Y0 sing 10 n n C24 O23 5Y0 sing 11 n n N9 C5 5Y0 sing 12 n n C5 C6 5Y0 sing 13 n y C5 C4 5Y0 doub 14 n y C6 C1 5Y0 doub 15 n y C6 C10 5Y0 sing 16 n n C1 C2 5Y0 sing 17 n y C2 C3 5Y0 doub 18 n y C3 C4 5Y0 sing 19 n y C3 F8 5Y0 sing 20 n n C4 F7 5Y0 sing 21 n n C10 O11 5Y0 doub 22 n n C10 N12 5Y0 sing 23 n n N12 O21 5Y0 sing 24 n n O21 C22 5Y0 sing 25 n n C22 C25 5Y0 sing 26 n n C25 O26 5Y0 sing 27 n n C17 H17 5Y0 sing 28 n n C14 H14 5Y0 sing 29 n n N9 H9 5Y0 sing 30 n n C15 H15 5Y0 sing 31 n n C24 H241 5Y0 sing 32 n n C24 H242 5Y0 sing 33 n n C25 H25 5Y0 sing 34 n n O23 H23 5Y0 sing 35 n n C1 H1 5Y0 sing 36 n n C2 H2 5Y0 sing 37 n n N12 H12 5Y0 sing 38 n n C22 H221 5Y0 sing 39 n n C22 H222 5Y0 sing 40 n n O26 H26 5Y0 sing 41 n n # _atom_sites.entry_id 4AN3 _atom_sites.fract_transf_matrix[1][1] 0.009203 _atom_sites.fract_transf_matrix[1][2] 0.005313 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010627 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1382 1382 MG MG . C 3 ATP A 1 1383 1383 ATP ATP . D 4 5Y0 A 1 1384 1384 5Y0 5Y0 . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . E 5 HOH A 30 2030 2030 HOH HOH . E 5 HOH A 31 2031 2031 HOH HOH . E 5 HOH A 32 2032 2032 HOH HOH . E 5 HOH A 33 2033 2033 HOH HOH . E 5 HOH A 34 2034 2034 HOH HOH . E 5 HOH A 35 2035 2035 HOH HOH . E 5 HOH A 36 2036 2036 HOH HOH . E 5 HOH A 37 2037 2037 HOH HOH . E 5 HOH A 38 2038 2038 HOH HOH . E 5 HOH A 39 2039 2039 HOH HOH . E 5 HOH A 40 2040 2040 HOH HOH . E 5 HOH A 41 2041 2041 HOH HOH . E 5 HOH A 42 2042 2042 HOH HOH . E 5 HOH A 43 2043 2043 HOH HOH . E 5 HOH A 44 2044 2044 HOH HOH . E 5 HOH A 45 2045 2045 HOH HOH . E 5 HOH A 46 2046 2046 HOH HOH . E 5 HOH A 47 2047 2047 HOH HOH . E 5 HOH A 48 2048 2048 HOH HOH . E 5 HOH A 49 2049 2049 HOH HOH . E 5 HOH A 50 2050 2050 HOH HOH . E 5 HOH A 51 2051 2051 HOH HOH . E 5 HOH A 52 2052 2052 HOH HOH . E 5 HOH A 53 2053 2053 HOH HOH . E 5 HOH A 54 2054 2054 HOH HOH . E 5 HOH A 55 2055 2055 HOH HOH . E 5 HOH A 56 2056 2056 HOH HOH . E 5 HOH A 57 2057 2057 HOH HOH . E 5 HOH A 58 2058 2058 HOH HOH . E 5 HOH A 59 2059 2059 HOH HOH . E 5 HOH A 60 2060 2060 HOH HOH . E 5 HOH A 61 2061 2061 HOH HOH . E 5 HOH A 62 2062 2062 HOH HOH . E 5 HOH A 63 2063 2063 HOH HOH . E 5 HOH A 64 2064 2064 HOH HOH . E 5 HOH A 65 2065 2065 HOH HOH . E 5 HOH A 66 2066 2066 HOH HOH . E 5 HOH A 67 2067 2067 HOH HOH . E 5 HOH A 68 2068 2068 HOH HOH . E 5 HOH A 69 2069 2069 HOH HOH . E 5 HOH A 70 2070 2070 HOH HOH . E 5 HOH A 71 2071 2071 HOH HOH . E 5 HOH A 72 2072 2072 HOH HOH . E 5 HOH A 73 2073 2073 HOH HOH . E 5 HOH A 74 2074 2074 HOH HOH . E 5 HOH A 75 2075 2075 HOH HOH . E 5 HOH A 76 2076 2076 HOH HOH . E 5 HOH A 77 2077 2077 HOH HOH . E 5 HOH A 78 2078 2078 HOH HOH . E 5 HOH A 79 2079 2079 HOH HOH . E 5 HOH A 80 2080 2080 HOH HOH . E 5 HOH A 81 2081 2081 HOH HOH . E 5 HOH A 82 2082 2082 HOH HOH . E 5 HOH A 83 2083 2083 HOH HOH . E 5 HOH A 84 2084 2084 HOH HOH . E 5 HOH A 85 2085 2085 HOH HOH . E 5 HOH A 86 2086 2086 HOH HOH . E 5 HOH A 87 2087 2087 HOH HOH . E 5 HOH A 88 2088 2088 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 5Y0 . . . D 4 6.215 36.594 4.737 1 31.04 ? C13 5Y0 1384 A 1 HETATM 2 C C14 5Y0 . . . D 4 6.451 37.064 3.427 1 29.94 ? C14 5Y0 1384 A 1 HETATM 3 C C15 5Y0 . . . D 4 6.559 38.407 3.216 1 24.03 ? C15 5Y0 1384 A 1 HETATM 4 C C16 5Y0 . . . D 4 6.46 39.362 4.238 1 28.36 ? C16 5Y0 1384 A 1 HETATM 5 C C17 5Y0 . . . D 4 6.199 38.858 5.53 1 29.45 ? C17 5Y0 1384 A 1 HETATM 6 C C18 5Y0 . . . D 4 6.088 37.505 5.762 1 29.99 ? C18 5Y0 1384 A 1 HETATM 7 N N9 5Y0 . . . D 4 6.059 35.26 5.013 1 33.6 ? N9 5Y0 1384 A 1 HETATM 8 C C5 5Y0 . . . D 4 5.86 34.217 4.145 1 34.8 ? C5 5Y0 1384 A 1 HETATM 9 C C6 5Y0 . . . D 4 4.815 33.28 4.23 1 35.85 ? C6 5Y0 1384 A 1 HETATM 10 C C1 5Y0 . . . D 4 4.728 32.234 3.285 1 38.39 ? C1 5Y0 1384 A 1 HETATM 11 C C2 5Y0 . . . D 4 5.704 32.104 2.272 1 36.88 ? C2 5Y0 1384 A 1 HETATM 12 C C3 5Y0 . . . D 4 6.761 33.02 2.227 1 37.46 ? C3 5Y0 1384 A 1 HETATM 13 C C4 5Y0 . . . D 4 6.803 34.055 3.129 1 36.67 ? C4 5Y0 1384 A 1 HETATM 14 C C10 5Y0 . . . D 4 3.79 33.349 5.294 1 38.34 ? C10 5Y0 1384 A 1 HETATM 15 N N12 5Y0 . . . D 4 2.672 32.627 5.234 1 45.19 ? N12 5Y0 1384 A 1 HETATM 16 O O11 5Y0 . . . D 4 4.146 33.808 6.381 1 33.23 ? O11 5Y0 1384 A 1 HETATM 17 O O21 5Y0 . . . D 4 1.931 32.431 6.42 1 52.74 ? O21 5Y0 1384 A 1 HETATM 18 C C22 5Y0 . . . D 4 0.731 31.642 6.505 1 54.62 ? C22 5Y0 1384 A 1 HETATM 19 C C24 5Y0 . . . D 4 1.889 31.065 8.656 1 56.12 ? C24 5Y0 1384 A 1 HETATM 20 O O26 5Y0 . . . D 4 0.06 29.671 7.838 1 60.28 ? O26 5Y0 1384 A 1 HETATM 21 O O23 5Y0 . . . D 4 1.854 32.407 9.113 1 54.94 ? O23 5Y0 1384 A 1 HETATM 22 C C25 5Y0 . . . D 4 0.574 31.013 7.902 1 57.45 ? C25 5Y0 1384 A 1 HETATM 23 I I20 5Y0 . . . D 4 6.661 41.476 3.996 1 38.61 ? I20 5Y0 1384 A 1 HETATM 24 F F19 5Y0 . . . D 4 5.847 37.086 7.034 1 33.14 ? F19 5Y0 1384 A 1 HETATM 25 F F7 5Y0 . . . D 4 7.825 34.909 3.017 1 39.06 ? F7 5Y0 1384 A 1 HETATM 26 F F8 5Y0 . . . D 4 7.756 32.983 1.306 1 40 ? F8 5Y0 1384 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #