data_4AOJ # _model_server_result.job_id A40cH7_AWweuSCNSfh5_mw _model_server_result.datetime_utc '2024-11-05 14:54:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4aoj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":900}' # _entry.id 4AOJ # _exptl.entry_id 4AOJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 391.83 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloranyl-N2-[(1S)-1-(5-fluoranylpyridin-2-yl)ethyl]-N4-(3-propan-2-yloxy-1H-pyrazol-5-yl)pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AOJ _cell.length_a 130.727 _cell.length_b 158.419 _cell.length_c 152.577 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AOJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 130.727 158.419 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 130.727 0 0 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 158.419 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 34 A CYS 501 1_555 H ZN ZN . B ZN 1792 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc2 A NE2 HIS 37 A HIS 504 1_555 E ZN ZN . A ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc3 A OE1 GLU 48 A GLU 515 1_555 F ZN ZN . A ZN 1791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc4 A NZ LYS 56 A LYS 523 1_555 F ZN ZN . A ZN 1791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc5 A SG CYS 112 A CYS 579 1_555 E ZN ZN . A ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc6 A OE1 GLU 114 A GLU 581 1_555 E ZN ZN . A ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc7 E ZN ZN . A ZN 1790 1_555 C SG CYS 34 C CYS 501 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc8 B SG CYS 34 B CYS 501 1_555 K ZN ZN . C ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc9 B NE2 HIS 37 B HIS 504 1_555 H ZN ZN . B ZN 1792 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc10 B OE2 GLU 48 B GLU 515 1_555 I ZN ZN . B ZN 1793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc11 B NZ LYS 56 B LYS 523 1_555 I ZN ZN . B ZN 1793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? metalc ? metalc12 B SG CYS 112 B CYS 579 1_555 H ZN ZN . B ZN 1792 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc13 C NE2 HIS 37 C HIS 504 1_555 K ZN ZN . C ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? metalc ? metalc14 C OE2 GLU 48 C GLU 515 1_555 L ZN ZN . C ZN 1791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc15 C NZ LYS 56 C LYS 523 1_555 L ZN ZN . C ZN 1791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc16 C SG CYS 112 C CYS 579 1_555 K ZN ZN . C ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc17 C OE2 GLU 114 C GLU 581 1_555 K ZN ZN . C ZN 1790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? # _chem_comp.formula 'C17 H19 Cl F N7 O' _chem_comp.formula_weight 391.83 _chem_comp.id V4Z _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloranyl-N2-[(1S)-1-(5-fluoranylpyridin-2-yl)ethyl]-N4-(3-propan-2-yloxy-1H-pyrazol-5-yl)pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 V4Z sing 358 n n C2 C3 V4Z sing 359 n n C2 O1 V4Z sing 360 n n O1 C4 V4Z sing 361 n n C4 C5 V4Z sing 362 n y C4 N7 V4Z doub 363 n y C5 C6 V4Z doub 364 n y C6 N1 V4Z sing 365 n n C6 N6 V4Z sing 366 n y N1 C7 V4Z sing 367 n n C7 N2 V4Z sing 368 n y C7 C17 V4Z doub 369 n y N2 C8 V4Z doub 370 n y C8 N3 V4Z sing 371 n n C8 N5 V4Z sing 372 n y N3 C9 V4Z sing 373 n n C9 C10 V4Z sing 374 n n C9 C11 V4Z sing 375 n n C11 C12 V4Z sing 376 n y C11 N4 V4Z doub 377 n y C12 C13 V4Z doub 378 n y C13 C14 V4Z sing 379 n y C14 F1 V4Z sing 380 n n C14 C15 V4Z doub 381 n y C15 N4 V4Z sing 382 n y N5 C16 V4Z doub 383 n y C16 C17 V4Z sing 384 n y C17 CL1 V4Z sing 385 n n N6 N7 V4Z sing 386 n y C1 H11C V4Z sing 387 n n C1 H12C V4Z sing 388 n n C1 H13C V4Z sing 389 n n C2 H2 V4Z sing 390 n n C3 H31C V4Z sing 391 n n C3 H32C V4Z sing 392 n n C3 H33C V4Z sing 393 n n C5 H5 V4Z sing 394 n n N1 H1 V4Z sing 395 n n N6 H6 V4Z sing 396 n n N3 H3 V4Z sing 397 n n C9 H9 V4Z sing 398 n n C10 H101 V4Z sing 399 n n C10 H102 V4Z sing 400 n n C10 H103 V4Z sing 401 n n C12 H12 V4Z sing 402 n n C13 H13 V4Z sing 403 n n C15 H15 V4Z sing 404 n n C16 H16 V4Z sing 405 n n # _atom_sites.entry_id 4AOJ _atom_sites.fract_transf_matrix[1][1] 0.00765 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 V4Z A 1 900 900 V4Z V4Z . E 3 ZN A 1 1790 1790 ZN ZN . F 3 ZN A 1 1791 1791 ZN ZN . G 2 V4Z B 1 900 900 V4Z V4Z . H 3 ZN B 1 1792 1792 ZN ZN . I 3 ZN B 1 1793 1793 ZN ZN . J 2 V4Z C 1 900 900 V4Z V4Z . K 3 ZN C 1 1790 1790 ZN ZN . L 3 ZN C 1 1791 1791 ZN ZN . M 4 HOH A 1 2001 2001 HOH HOH . M 4 HOH A 2 2002 2002 HOH HOH . M 4 HOH A 3 2003 2003 HOH HOH . M 4 HOH A 4 2004 2004 HOH HOH . M 4 HOH A 5 2005 2005 HOH HOH . M 4 HOH A 6 2006 2006 HOH HOH . M 4 HOH A 7 2007 2007 HOH HOH . M 4 HOH A 8 2008 2008 HOH HOH . M 4 HOH A 9 2009 2009 HOH HOH . M 4 HOH A 10 2010 2010 HOH HOH . M 4 HOH A 11 2011 2011 HOH HOH . M 4 HOH A 12 2012 2012 HOH HOH . M 4 HOH A 13 2013 2013 HOH HOH . M 4 HOH A 14 2014 2014 HOH HOH . M 4 HOH A 15 2015 2015 HOH HOH . M 4 HOH A 16 2016 2016 HOH HOH . M 4 HOH A 17 2017 2017 HOH HOH . M 4 HOH A 18 2018 2018 HOH HOH . M 4 HOH A 19 2019 2019 HOH HOH . M 4 HOH A 20 2020 2020 HOH HOH . M 4 HOH A 21 2021 2021 HOH HOH . M 4 HOH A 22 2022 2022 HOH HOH . M 4 HOH A 23 2023 2023 HOH HOH . M 4 HOH A 24 2024 2024 HOH HOH . M 4 HOH A 25 2025 2025 HOH HOH . M 4 HOH A 26 2026 2026 HOH HOH . M 4 HOH A 27 2027 2027 HOH HOH . M 4 HOH A 28 2028 2028 HOH HOH . M 4 HOH A 29 2029 2029 HOH HOH . M 4 HOH A 30 2030 2030 HOH HOH . M 4 HOH A 31 2031 2031 HOH HOH . M 4 HOH A 32 2032 2032 HOH HOH . M 4 HOH A 33 2033 2033 HOH HOH . M 4 HOH A 34 2034 2034 HOH HOH . M 4 HOH A 35 2035 2035 HOH HOH . M 4 HOH A 36 2036 2036 HOH HOH . M 4 HOH A 37 2037 2037 HOH HOH . M 4 HOH A 38 2038 2038 HOH HOH . M 4 HOH A 39 2039 2039 HOH HOH . M 4 HOH A 40 2040 2040 HOH HOH . M 4 HOH A 41 2041 2041 HOH HOH . N 4 HOH B 1 2001 2001 HOH HOH . N 4 HOH B 2 2002 2002 HOH HOH . N 4 HOH B 3 2003 2003 HOH HOH . N 4 HOH B 4 2004 2004 HOH HOH . N 4 HOH B 5 2005 2005 HOH HOH . N 4 HOH B 6 2006 2006 HOH HOH . N 4 HOH B 7 2007 2007 HOH HOH . N 4 HOH B 8 2008 2008 HOH HOH . N 4 HOH B 9 2009 2009 HOH HOH . N 4 HOH B 10 2010 2010 HOH HOH . N 4 HOH B 11 2011 2011 HOH HOH . N 4 HOH B 12 2012 2012 HOH HOH . N 4 HOH B 13 2013 2013 HOH HOH . N 4 HOH B 14 2014 2014 HOH HOH . N 4 HOH B 15 2015 2015 HOH HOH . N 4 HOH B 16 2016 2016 HOH HOH . N 4 HOH B 17 2017 2017 HOH HOH . N 4 HOH B 18 2018 2018 HOH HOH . N 4 HOH B 19 2019 2019 HOH HOH . N 4 HOH B 20 2020 2020 HOH HOH . N 4 HOH B 21 2021 2021 HOH HOH . N 4 HOH B 22 2022 2022 HOH HOH . N 4 HOH B 23 2023 2023 HOH HOH . N 4 HOH B 24 2024 2024 HOH HOH . N 4 HOH B 25 2025 2025 HOH HOH . N 4 HOH B 26 2026 2026 HOH HOH . N 4 HOH B 27 2027 2027 HOH HOH . N 4 HOH B 28 2028 2028 HOH HOH . N 4 HOH B 29 2029 2029 HOH HOH . N 4 HOH B 30 2030 2030 HOH HOH . N 4 HOH B 31 2031 2031 HOH HOH . O 4 HOH C 1 2001 2001 HOH HOH . O 4 HOH C 2 2002 2002 HOH HOH . O 4 HOH C 3 2003 2003 HOH HOH . O 4 HOH C 4 2004 2004 HOH HOH . O 4 HOH C 5 2005 2005 HOH HOH . O 4 HOH C 6 2006 2006 HOH HOH . O 4 HOH C 7 2007 2007 HOH HOH . O 4 HOH C 8 2008 2008 HOH HOH . O 4 HOH C 9 2009 2009 HOH HOH . O 4 HOH C 10 2010 2010 HOH HOH . O 4 HOH C 11 2011 2011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 V4Z . . . D 2 90.009 56.374 24.062 1 23.88 ? C1 V4Z 900 A 1 HETATM 2 C C2 V4Z . . . D 2 91.214 57.2 24.48 1 27.97 ? C2 V4Z 900 A 1 HETATM 3 C C3 V4Z . . . D 2 91.11 58.67 24.13 1 25.3 ? C3 V4Z 900 A 1 HETATM 4 O O1 V4Z . . . D 2 91.357 57.054 25.89 1 30.4 ? O1 V4Z 900 A 1 HETATM 5 C C4 V4Z . . . D 2 92.623 57.116 26.379 1 29.19 ? C4 V4Z 900 A 1 HETATM 6 C C5 V4Z . . . D 2 93.905 57.078 25.872 1 26.72 ? C5 V4Z 900 A 1 HETATM 7 C C6 V4Z . . . D 2 94.75 57.221 27.015 1 28.85 ? C6 V4Z 900 A 1 HETATM 8 N N1 V4Z . . . D 2 96.118 57.255 27.006 1 26.65 ? N1 V4Z 900 A 1 HETATM 9 C C7 V4Z . . . D 2 97.006 57.157 25.95 1 27.57 ? C7 V4Z 900 A 1 HETATM 10 N N2 V4Z . . . D 2 96.565 57.054 24.687 1 29.96 ? N2 V4Z 900 A 1 HETATM 11 C C8 V4Z . . . D 2 97.512 56.944 23.741 1 31.14 ? C8 V4Z 900 A 1 HETATM 12 N N3 V4Z . . . D 2 97.207 56.821 22.396 1 32.08 ? N3 V4Z 900 A 1 HETATM 13 C C9 V4Z . . . D 2 95.792 56.906 22.108 1 32.22 ? C9 V4Z 900 A 1 HETATM 14 C C10 V4Z . . . D 2 95.673 57.407 20.674 1 30.51 ? C10 V4Z 900 A 1 HETATM 15 C C11 V4Z . . . D 2 95.099 55.587 22.16 1 29.15 ? C11 V4Z 900 A 1 HETATM 16 C C12 V4Z . . . D 2 93.745 55.595 22.354 1 25.37 ? C12 V4Z 900 A 1 HETATM 17 C C13 V4Z . . . D 2 93.072 54.41 22.399 1 22.19 ? C13 V4Z 900 A 1 HETATM 18 C C14 V4Z . . . D 2 93.759 53.241 22.254 1 26.28 ? C14 V4Z 900 A 1 HETATM 19 F F1 V4Z . . . D 2 93.08 52.049 22.278 1 32.43 ? F1 V4Z 900 A 1 HETATM 20 C C15 V4Z . . . D 2 95.111 53.31 22.064 1 27.51 ? C15 V4Z 900 A 1 HETATM 21 N N4 V4Z . . . D 2 95.792 54.462 22.018 1 30.62 ? N4 V4Z 900 A 1 HETATM 22 N N5 V4Z . . . D 2 98.831 56.947 23.959 1 31.43 ? N5 V4Z 900 A 1 HETATM 23 C C16 V4Z . . . D 2 99.235 57.052 25.219 1 29.14 ? C16 V4Z 900 A 1 HETATM 24 C C17 V4Z . . . D 2 98.355 57.155 26.261 1 30.03 ? C17 V4Z 900 A 1 HETATM 25 CL CL1 V4Z . . . D 2 99.046 57.259 27.866 1 33.74 ? CL1 V4Z 900 A 1 HETATM 26 N N6 V4Z . . . D 2 94.044 57.337 28.15 1 27.86 ? N6 V4Z 900 A 1 HETATM 27 N N7 V4Z . . . D 2 92.784 57.254 27.729 1 30 ? N7 V4Z 900 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #