data_4AP0
#
_model_server_result.job_id            9YVIGZ9vA5PqxLfkkQU_pQ 
_model_server_result.datetime_utc      '2024-11-25 17:28:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ap0 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1001}' 
#
_entry.id    4AP0 
#
_exptl.entry_id    4AP0 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.02 
_cell.angle_gamma         90 
_cell.entry_id            4AP0 
_cell.length_a            64.723 
_cell.length_b            112.607 
_cell.length_c            106.913 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4AP0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,W 1 1 
B,J,K,L,M,N,O,X 2 1 
C,P,Q,R,Y 3 1 
D,S,T,U,V,Z 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 J N N 
? 2 P N N 
? 2 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 114 A THR 112 1_555 E MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 E MG MG . A MG 1001 1_555 F O3B ADP . A ADP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc3 E MG MG . A MG 1001 1_555 W O HOH . A HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc4 E MG MG . A MG 1001 1_555 W O HOH . A HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc5 E MG MG . A MG 1001 1_555 W O HOH . A HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc6 B OG1 THR 114 B THR 112 1_555 J MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc7 J MG MG . B MG 1001 1_555 K O3B ADP . B ADP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc8 J MG MG . B MG 1001 1_555 X O HOH . B HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc9 J MG MG . B MG 1001 1_555 X O HOH . B HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc10 J MG MG . B MG 1001 1_555 X O HOH . B HOH 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc11 C OG1 THR 114 C THR 112 1_555 P MG MG . C MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc12 P MG MG . C MG 1001 1_555 Q O3B ADP . C ADP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc13 P MG MG . C MG 1001 1_555 Y O HOH . C HOH 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc14 P MG MG . C MG 1001 1_555 Y O HOH . C HOH 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc15 P MG MG . C MG 1001 1_555 Y O HOH . C HOH 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc16 D OG1 THR 114 D THR 112 1_555 S MG MG . D MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc17 S MG MG . D MG 1001 1_555 T O3B ADP . D ADP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc18 S MG MG . D MG 1001 1_555 Z O HOH . D HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc19 S MG MG . D MG 1001 1_555 Z O HOH . D HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc20 S MG MG . D MG 1001 1_555 Z O HOH . D HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4AP0 
_atom_sites.fract_transf_matrix[1][1]    0.01545 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000005 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00888 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009353 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MG A 1 1001 1001 MG MG . 
F 3 ADP A 1 1003 1003 ADP ADP . 
G 4 CL A 1 1367 1367 CL CL . 
H 4 CL A 1 1368 1368 CL CL . 
I 5 G7X A 1 2001 2001 G7X G7X . 
J 2 MG B 1 1001 1001 MG MG . 
K 3 ADP B 1 1003 1003 ADP ADP . 
L 4 CL B 1 1360 1360 CL CL . 
M 4 CL B 1 1361 1361 CL CL . 
N 4 CL B 1 1362 1362 CL CL . 
O 5 G7X B 1 2001 2001 G7X G7X . 
P 2 MG C 1 1001 1001 MG MG . 
Q 3 ADP C 1 1003 1003 ADP ADP . 
R 5 G7X C 1 2001 2001 G7X G7X . 
S 2 MG D 1 1001 1001 MG MG . 
T 3 ADP D 1 1003 1003 ADP ADP . 
U 4 CL D 1 1365 1365 CL CL . 
V 5 G7X D 1 2001 2001 G7X G7X . 
W 6 HOH A 1 2000 2000 HOH HOH . 
W 6 HOH A 2 2002 2002 HOH HOH . 
W 6 HOH A 3 2003 2003 HOH HOH . 
W 6 HOH A 4 2004 2004 HOH HOH . 
W 6 HOH A 5 2005 2005 HOH HOH . 
W 6 HOH A 6 2006 2006 HOH HOH . 
W 6 HOH A 7 2007 2007 HOH HOH . 
W 6 HOH A 8 2008 2008 HOH HOH . 
W 6 HOH A 9 2009 2009 HOH HOH . 
X 6 HOH B 1 2000 2000 HOH HOH . 
X 6 HOH B 2 2002 2002 HOH HOH . 
X 6 HOH B 3 2003 2003 HOH HOH . 
X 6 HOH B 4 2004 2004 HOH HOH . 
X 6 HOH B 5 2005 2005 HOH HOH . 
X 6 HOH B 6 2006 2006 HOH HOH . 
Y 6 HOH C 1 2000 2000 HOH HOH . 
Y 6 HOH C 2 2002 2002 HOH HOH . 
Y 6 HOH C 3 2003 2003 HOH HOH . 
Y 6 HOH C 4 2004 2004 HOH HOH . 
Y 6 HOH C 5 2005 2005 HOH HOH . 
Y 6 HOH C 6 2006 2006 HOH HOH . 
Y 6 HOH C 7 2007 2007 HOH HOH . 
Y 6 HOH C 8 2008 2008 HOH HOH . 
Y 6 HOH C 9 2009 2009 HOH HOH . 
Y 6 HOH C 10 2010 2010 HOH HOH . 
Z 6 HOH D 1 2000 2000 HOH HOH . 
Z 6 HOH D 2 2002 2002 HOH HOH . 
Z 6 HOH D 3 2003 2003 HOH HOH . 
Z 6 HOH D 4 2004 2004 HOH HOH . 
Z 6 HOH D 5 2005 2005 HOH HOH . 
Z 6 HOH D 6 2006 2006 HOH HOH . 
Z 6 HOH D 7 2007 2007 HOH HOH . 
Z 6 HOH D 8 2008 2008 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               44.252 
_atom_site.Cartn_y               8.596 
_atom_site.Cartn_z               3.889 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.14 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1001 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#