data_4APN
#
_model_server_result.job_id            GEDM2D7801Z-oJEuCUSxXg 
_model_server_result.datetime_utc      '2024-11-17 04:42:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4apn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1492}' 
#
_entry.id    4APN 
#
_exptl.entry_id    4APN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              422.649 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[[1-(4-ethylphenyl)-2-methyl-5-(4-methylsulfanylphenyl)pyrrol-3-yl]methyl]thiomorpholine 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4APN 
_cell.length_a            102.561 
_cell.length_b            102.561 
_cell.length_c            191.985 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4APN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
#
_chem_comp.formula           'C25 H30 N2 S2' 
_chem_comp.formula_weight    422.649 
_chem_comp.id                JV0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[[1-(4-ethylphenyl)-2-methyl-5-(4-methylsulfanylphenyl)pyrrol-3-yl]methyl]thiomorpholine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C7 JV0 sing 264 n n 
C7 N1 JV0 sing 265 n y 
C7 C9 JV0 doub 266 n y 
N1 C6 JV0 sing 267 n n 
N1 C16 JV0 sing 268 n y 
C6 C24 JV0 sing 269 n y 
C6 C5 JV0 doub 270 n y 
C24 C25 JV0 doub 271 n y 
C25 C3 JV0 sing 272 n y 
C3 C2 JV0 sing 273 n n 
C3 C4 JV0 doub 274 n y 
C2 C1 JV0 sing 275 n n 
C4 C5 JV0 sing 276 n y 
C9 C10 JV0 sing 277 n n 
C9 C15 JV0 sing 278 n y 
C10 N2 JV0 sing 279 n n 
N2 C11 JV0 sing 280 n n 
N2 C14 JV0 sing 281 n n 
C11 C12 JV0 sing 282 n n 
C12 S1 JV0 sing 283 n n 
S1 C13 JV0 sing 284 n n 
C13 C14 JV0 sing 285 n n 
C15 C16 JV0 doub 286 n y 
C16 C17 JV0 sing 287 n n 
C17 C18 JV0 sing 288 n y 
C17 C23 JV0 doub 289 n y 
C18 C19 JV0 doub 290 n y 
C19 C20 JV0 sing 291 n y 
C23 C22 JV0 sing 292 n y 
C22 C20 JV0 doub 293 n y 
C20 S2 JV0 sing 294 n n 
S2 C21 JV0 sing 295 n n 
C8 H81C JV0 sing 296 n n 
C8 H82C JV0 sing 297 n n 
C8 H83C JV0 sing 298 n n 
C24 H24 JV0 sing 299 n n 
C5 H5 JV0 sing 300 n n 
C25 H25 JV0 sing 301 n n 
C2 H21C JV0 sing 302 n n 
C2 H22C JV0 sing 303 n n 
C4 H4 JV0 sing 304 n n 
C1 H11C JV0 sing 305 n n 
C1 H12C JV0 sing 306 n n 
C1 H13C JV0 sing 307 n n 
C10 H101 JV0 sing 308 n n 
C10 H102 JV0 sing 309 n n 
C15 H15 JV0 sing 310 n n 
C11 H111 JV0 sing 311 n n 
C11 H112 JV0 sing 312 n n 
C14 H141 JV0 sing 313 n n 
C14 H142 JV0 sing 314 n n 
C12 H121 JV0 sing 315 n n 
C12 H122 JV0 sing 316 n n 
C13 H131 JV0 sing 317 n n 
C13 H132 JV0 sing 318 n n 
C18 H18 JV0 sing 319 n n 
C23 H23 JV0 sing 320 n n 
C19 H19 JV0 sing 321 n n 
C22 H22 JV0 sing 322 n n 
C21 H211 JV0 sing 323 n n 
C21 H212 JV0 sing 324 n n 
C21 H213 JV0 sing 325 n n 
#
_atom_sites.entry_id                     4APN 
_atom_sites.fract_transf_matrix[1][1]    0.00975 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00975 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005209 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 1489 1489 FAD FAD . 
D 3 NDP A 1 1490 1490 NDP NDP . 
E 2 FAD B 1 1489 1489 FAD FAD . 
F 3 NDP B 1 1490 1490 NDP NDP . 
G 4 JV0 B 1 1491 1491 JV0 JV0 . 
H 4 JV0 B 1 1492 1492 JV0 JV0 . 
I 4 JV0 B 1 1493 1493 JV0 JV0 . 
J 4 JV0 B 1 1494 1494 JV0 JV0 . 
K 5 HOH A 1 2001 2001 HOH HOH . 
K 5 HOH A 2 2002 2002 HOH HOH . 
L 5 HOH B 1 2001 2001 HOH HOH . 
L 5 HOH B 2 2002 2002 HOH HOH . 
L 5 HOH B 3 2003 2003 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C8 JV0 . . . H 4 -45.329 20.574 -18.97 0.8 66.42 ? C8 JV0 1492 B 1 
HETATM 2 C C7 JV0 . . . H 4 -46.352 21.142 -17.963 0.8 66.83 ? C7 JV0 1492 B 1 
HETATM 3 N N1 JV0 . . . H 4 -47.644 21.332 -18.234 0.8 67.23 ? N1 JV0 1492 B 1 
HETATM 4 C C6 JV0 . . . H 4 -48.184 21.054 -19.444 0.8 67.71 ? C6 JV0 1492 B 1 
HETATM 5 C C24 JV0 . . . H 4 -47.747 21.776 -20.56 0.8 68.03 ? C24 JV0 1492 B 1 
HETATM 6 C C25 JV0 . . . H 4 -48.238 21.548 -21.84 0.8 68.09 ? C25 JV0 1492 B 1 
HETATM 7 C C3 JV0 . . . H 4 -49.196 20.556 -22.031 0.8 68.32 ? C3 JV0 1492 B 1 
HETATM 8 C C2 JV0 . . . H 4 -49.748 20.291 -23.444 0.8 68.36 ? C2 JV0 1492 B 1 
HETATM 9 C C1 JV0 . . . H 4 -49.689 21.541 -24.343 0.8 68.39 ? C1 JV0 1492 B 1 
HETATM 10 C C4 JV0 . . . H 4 -49.641 19.804 -20.932 0.8 68.15 ? C4 JV0 1492 B 1 
HETATM 11 C C5 JV0 . . . H 4 -49.134 20.042 -19.646 0.8 67.88 ? C5 JV0 1492 B 1 
HETATM 12 C C9 JV0 . . . H 4 -46.11 21.533 -16.643 0.8 66.63 ? C9 JV0 1492 B 1 
HETATM 13 C C10 JV0 . . . H 4 -44.787 21.517 -15.825 0.8 66.42 ? C10 JV0 1492 B 1 
HETATM 14 N N2 JV0 . . . H 4 -44.156 20.179 -15.738 0.8 66.2 ? N2 JV0 1492 B 1 
HETATM 15 C C11 JV0 . . . H 4 -43.406 19.951 -17.004 0.8 66.16 ? C11 JV0 1492 B 1 
HETATM 16 C C12 JV0 . . . H 4 -42.718 18.587 -17.106 0.8 66.15 ? C12 JV0 1492 B 1 
HETATM 17 S S1 JV0 . . . H 4 -43.919 17.224 -16.917 0.8 66.54 ? S1 JV0 1492 B 1 
HETATM 18 C C13 JV0 . . . H 4 -44.615 17.769 -15.319 0.8 66.01 ? C13 JV0 1492 B 1 
HETATM 19 C C14 JV0 . . . H 4 -45.194 19.179 -15.39 0.8 66.06 ? C14 JV0 1492 B 1 
HETATM 20 C C15 JV0 . . . H 4 -47.288 21.953 -16.181 0.8 66.8 ? C15 JV0 1492 B 1 
HETATM 21 C C16 JV0 . . . H 4 -48.233 21.839 -17.129 0.8 67.14 ? C16 JV0 1492 B 1 
HETATM 22 C C17 JV0 . . . H 4 -49.561 22.226 -16.907 0.8 67.37 ? C17 JV0 1492 B 1 
HETATM 23 C C18 JV0 . . . H 4 -50.663 21.478 -17.342 0.8 67.55 ? C18 JV0 1492 B 1 
HETATM 24 C C19 JV0 . . . H 4 -51.965 21.923 -17.088 0.8 67.75 ? C19 JV0 1492 B 1 
HETATM 25 C C23 JV0 . . . H 4 -49.775 23.414 -16.202 0.8 67.5 ? C23 JV0 1492 B 1 
HETATM 26 C C22 JV0 . . . H 4 -51.067 23.857 -15.944 0.8 67.67 ? C22 JV0 1492 B 1 
HETATM 27 C C20 JV0 . . . H 4 -52.162 23.115 -16.385 0.8 67.89 ? C20 JV0 1492 B 1 
HETATM 28 S S2 JV0 . . . H 4 -53.782 23.699 -16.046 0.8 68.82 ? S2 JV0 1492 B 1 
HETATM 29 C C21 JV0 . . . H 4 -53.789 24.362 -14.385 0.8 67.85 ? C21 JV0 1492 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           29 
#