data_4AQP
#
_model_server_result.job_id            xh2yGHnPi837hYGFfThqTw 
_model_server_result.datetime_utc      '2024-11-04 20:31:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4aqp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1690}' 
#
_entry.id    4AQP 
#
_exptl.entry_id    4AQP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4AQP 
_cell.length_a            47.539 
_cell.length_b            82.699 
_cell.length_c            137.11 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 4AQP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O ALA 40 B ALA 603 1_555 E NA NA . B NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc2 B O SER 43 B SER 606 1_555 E NA NA . B NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc3 B O LEU 46 B LEU 609 1_555 E NA NA . B NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc4 J O HOH . B HOH 2013 1_555 G NA NA . C NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc5 C O ALA 40 C ALA 603 1_555 G NA NA . C NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
metalc ? metalc6 C O SER 43 C SER 606 1_555 G NA NA . C NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
metalc ? metalc7 C O LEU 46 C LEU 609 1_555 G NA NA . C NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
metalc ? metalc8 C NZ LYS 126 C LYS 689 1_555 G NA NA . C NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc9 D O ALA 40 D ALA 603 1_555 H NA NA . D NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? 
metalc ? metalc10 D O SER 43 D SER 606 1_555 H NA NA . D NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc11 D O LEU 46 D LEU 609 1_555 H NA NA . D NA 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4AQP 
_atom_sites.fract_transf_matrix[1][1]    0.021035 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012092 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007293 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NA B 1 1690 1690 NA NA . 
F 3 PEG B 1 1691 1691 PEG PEG . 
G 2 NA C 1 1690 1690 NA NA . 
H 2 NA D 1 1690 1690 NA NA . 
I 4 HOH A 1 2001 2001 HOH HOH . 
I 4 HOH A 2 2002 2002 HOH HOH . 
I 4 HOH A 3 2003 2003 HOH HOH . 
I 4 HOH A 4 2004 2004 HOH HOH . 
I 4 HOH A 5 2005 2005 HOH HOH . 
I 4 HOH A 6 2006 2006 HOH HOH . 
I 4 HOH A 7 2007 2007 HOH HOH . 
I 4 HOH A 8 2008 2008 HOH HOH . 
I 4 HOH A 9 2009 2009 HOH HOH . 
I 4 HOH A 10 2010 2010 HOH HOH . 
I 4 HOH A 11 2011 2011 HOH HOH . 
I 4 HOH A 12 2012 2012 HOH HOH . 
J 4 HOH B 1 2001 2001 HOH HOH . 
J 4 HOH B 2 2002 2002 HOH HOH . 
J 4 HOH B 3 2003 2003 HOH HOH . 
J 4 HOH B 4 2004 2004 HOH HOH . 
J 4 HOH B 5 2005 2005 HOH HOH . 
J 4 HOH B 6 2006 2006 HOH HOH . 
J 4 HOH B 7 2007 2007 HOH HOH . 
J 4 HOH B 8 2008 2008 HOH HOH . 
J 4 HOH B 9 2009 2009 HOH HOH . 
J 4 HOH B 10 2010 2010 HOH HOH . 
J 4 HOH B 11 2011 2011 HOH HOH . 
J 4 HOH B 12 2012 2012 HOH HOH . 
J 4 HOH B 13 2013 2013 HOH HOH . 
J 4 HOH B 14 2014 2014 HOH HOH . 
J 4 HOH B 15 2015 2015 HOH HOH . 
J 4 HOH B 16 2016 2016 HOH HOH . 
J 4 HOH B 17 2017 2017 HOH HOH . 
J 4 HOH B 18 2018 2018 HOH HOH . 
J 4 HOH B 19 2019 2019 HOH HOH . 
K 4 HOH C 1 2001 2001 HOH HOH . 
K 4 HOH C 2 2002 2002 HOH HOH . 
K 4 HOH C 3 2003 2003 HOH HOH . 
K 4 HOH C 4 2004 2004 HOH HOH . 
K 4 HOH C 5 2005 2005 HOH HOH . 
K 4 HOH C 6 2006 2006 HOH HOH . 
K 4 HOH C 7 2007 2007 HOH HOH . 
K 4 HOH C 8 2008 2008 HOH HOH . 
K 4 HOH C 9 2009 2009 HOH HOH . 
K 4 HOH C 10 2010 2010 HOH HOH . 
K 4 HOH C 11 2011 2011 HOH HOH . 
K 4 HOH C 12 2012 2012 HOH HOH . 
K 4 HOH C 13 2013 2013 HOH HOH . 
K 4 HOH C 14 2014 2014 HOH HOH . 
K 4 HOH C 15 2015 2015 HOH HOH . 
K 4 HOH C 16 2016 2016 HOH HOH . 
K 4 HOH C 17 2017 2017 HOH HOH . 
K 4 HOH C 18 2018 2018 HOH HOH . 
K 4 HOH C 19 2019 2019 HOH HOH . 
K 4 HOH C 20 2020 2020 HOH HOH . 
K 4 HOH C 21 2021 2021 HOH HOH . 
L 4 HOH D 1 2001 2001 HOH HOH . 
L 4 HOH D 2 2002 2002 HOH HOH . 
L 4 HOH D 3 2003 2003 HOH HOH . 
L 4 HOH D 4 2004 2004 HOH HOH . 
L 4 HOH D 5 2005 2005 HOH HOH . 
L 4 HOH D 6 2006 2006 HOH HOH . 
L 4 HOH D 7 2007 2007 HOH HOH . 
L 4 HOH D 8 2008 2008 HOH HOH . 
L 4 HOH D 9 2009 2009 HOH HOH . 
L 4 HOH D 10 2010 2010 HOH HOH . 
L 4 HOH D 11 2011 2011 HOH HOH . 
L 4 HOH D 12 2012 2012 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -12.734 
_atom_site.Cartn_y               -10.323 
_atom_site.Cartn_z               23.136 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        59.27 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           1690 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    39 
_model_server_stats.query_time_ms           526 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#