data_4ARY
#
_model_server_result.job_id            894W2uojMyePN2uGCAgMNg 
_model_server_result.datetime_utc      '2024-12-27 04:42:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ary 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1613}' 
#
_entry.id    4ARY 
#
_exptl.entry_id    4ARY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              74.125 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,3-DIAMINOPROPANE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.75 
_cell.angle_gamma         90 
_cell.entry_id            4ARY 
_cell.length_a            121.36 
_cell.length_b            51.19 
_cell.length_c            210.65 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ARY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,K 1 1 
B,G,H,L 2 1 
C,I,M 3 1 
D,J,N 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
#
_chem_comp.formula           'C3 H10 N2' 
_chem_comp.formula_weight    74.125 
_chem_comp.id                13D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,3-DIAMINOPROPANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CA CB 13D sing 1 n n 
CA NAA 13D sing 2 n n 
CA HAC1 13D sing 3 n n 
CA HAC2 13D sing 4 n n 
CB CC 13D sing 5 n n 
CB HBC1 13D sing 6 n n 
CB HBC2 13D sing 7 n n 
CC ND 13D sing 8 n n 
CC HCC1 13D sing 9 n n 
CC HCC2 13D sing 10 n n 
ND HDN1 13D sing 11 n n 
ND HDN2 13D sing 12 n n 
NAA HAA1 13D sing 13 n n 
NAA HAA2 13D sing 14 n n 
#
_atom_sites.entry_id                     4ARY 
_atom_sites.fract_transf_matrix[1][1]    0.00824 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002324 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019535 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004932 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NGA A 1 1609 1609 NGA NGA . 
F 3 13D A 1 1610 1610 13D 13D . 
G 2 NGA B 1 1612 1612 NGA NGA . 
H 3 13D B 1 1613 1613 13D 13D . 
I 2 NGA C 1 1609 1609 NGA NGA . 
J 2 NGA D 1 1609 1609 NGA NGA . 
K 4 HOH A 1 2001 2001 HOH HOH . 
K 4 HOH A 2 2002 2002 HOH HOH . 
K 4 HOH A 3 2003 2003 HOH HOH . 
K 4 HOH A 4 2004 2004 HOH HOH . 
K 4 HOH A 5 2005 2005 HOH HOH . 
K 4 HOH A 6 2006 2006 HOH HOH . 
K 4 HOH A 7 2007 2007 HOH HOH . 
K 4 HOH A 8 2008 2008 HOH HOH . 
K 4 HOH A 9 2009 2009 HOH HOH . 
K 4 HOH A 10 2010 2010 HOH HOH . 
K 4 HOH A 11 2011 2011 HOH HOH . 
K 4 HOH A 12 2012 2012 HOH HOH . 
K 4 HOH A 13 2013 2013 HOH HOH . 
K 4 HOH A 14 2014 2014 HOH HOH . 
K 4 HOH A 15 2015 2015 HOH HOH . 
K 4 HOH A 16 2016 2016 HOH HOH . 
K 4 HOH A 17 2017 2017 HOH HOH . 
K 4 HOH A 18 2018 2018 HOH HOH . 
K 4 HOH A 19 2019 2019 HOH HOH . 
K 4 HOH A 20 2020 2020 HOH HOH . 
L 4 HOH B 1 2001 2001 HOH HOH . 
L 4 HOH B 2 2002 2002 HOH HOH . 
L 4 HOH B 3 2003 2003 HOH HOH . 
L 4 HOH B 4 2004 2004 HOH HOH . 
L 4 HOH B 5 2005 2005 HOH HOH . 
L 4 HOH B 6 2006 2006 HOH HOH . 
L 4 HOH B 7 2007 2007 HOH HOH . 
L 4 HOH B 8 2008 2008 HOH HOH . 
L 4 HOH B 9 2009 2009 HOH HOH . 
L 4 HOH B 10 2010 2010 HOH HOH . 
M 4 HOH C 1 2001 2001 HOH HOH . 
M 4 HOH C 2 2002 2002 HOH HOH . 
M 4 HOH C 3 2003 2003 HOH HOH . 
M 4 HOH C 4 2004 2004 HOH HOH . 
M 4 HOH C 5 2005 2005 HOH HOH . 
M 4 HOH C 6 2006 2006 HOH HOH . 
M 4 HOH C 7 2007 2007 HOH HOH . 
M 4 HOH C 8 2008 2008 HOH HOH . 
M 4 HOH C 9 2009 2009 HOH HOH . 
N 4 HOH D 1 2001 2001 HOH HOH . 
N 4 HOH D 2 2002 2002 HOH HOH . 
N 4 HOH D 3 2003 2003 HOH HOH . 
N 4 HOH D 4 2004 2004 HOH HOH . 
N 4 HOH D 5 2005 2005 HOH HOH . 
N 4 HOH D 6 2006 2006 HOH HOH . 
N 4 HOH D 7 2007 2007 HOH HOH . 
N 4 HOH D 8 2008 2008 HOH HOH . 
N 4 HOH D 9 2009 2009 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CA 13D . . . H 3 -37.565 11.879 99.349 1 45.34 ? CA 13D 1613 B 1 
HETATM 2 C CB 13D . . . H 3 -37.101 10.482 99.007 1 47.14 ? CB 13D 1613 B 1 
HETATM 3 C CC 13D . . . H 3 -35.967 10.047 99.919 1 50.97 ? CC 13D 1613 B 1 
HETATM 4 N ND 13D . . . H 3 -35.646 8.641 99.707 1 56.66 ? ND 13D 1613 B 1 
HETATM 5 N NAA 13D . . . H 3 -38.749 12.17 98.572 1 46.85 ? NAA 13D 1613 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#