data_4AUA # _model_server_result.job_id UsVdzczMi1nBkA-AvqAJSg _model_server_result.datetime_utc '2025-03-05 20:32:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4aua # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1302}' # _entry.id 4AUA # _exptl.entry_id 4AUA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 211.219 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1H-benzimidazol-2-yl(1H-pyrrol-2-yl)methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4AUA _cell.length_a 100.734 _cell.length_b 100.734 _cell.length_c 60.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AUA _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H9 N3 O' _chem_comp.formula_weight 211.219 _chem_comp.id 4AU _chem_comp.mon_nstd_flag . _chem_comp.name 1H-benzimidazol-2-yl(1H-pyrrol-2-yl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 4AU sing 1 n y C1 C6 4AU doub 2 n y C2 C3 4AU doub 3 n y C3 C4 4AU sing 4 n y C3 N17 4AU sing 5 n y C4 C5 4AU doub 6 n y C4 N9 4AU sing 7 n y C5 C6 4AU sing 8 n y C8 N17 4AU sing 9 n y C8 C10 4AU sing 10 n n C8 N9 4AU doub 11 n y C10 C11 4AU sing 12 n n C10 O16 4AU doub 13 n n C11 C12 4AU doub 14 n y C11 N7 4AU sing 15 n y C12 C13 4AU sing 16 n y C13 C14 4AU doub 17 n y C14 N7 4AU sing 18 n y N7 H21 4AU sing 19 n n N17 H26 4AU sing 20 n n C12 H23 4AU sing 21 n n C13 H24 4AU sing 22 n n C14 H25 4AU sing 23 n n C1 H1 4AU sing 24 n n C2 H2 4AU sing 25 n n C6 H6 4AU sing 26 n n C5 H5 4AU sing 27 n n # _atom_sites.entry_id 4AUA _atom_sites.fract_transf_matrix[1][1] 0.009927 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009927 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4AU A 1 1302 1302 4AU 4AU . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4AU . . . B 2 19.744 36.715 -11.476 1 72.35 ? C1 4AU 1302 A 1 HETATM 2 C C2 4AU . . . B 2 20.44 36.603 -10.284 1 70.05 ? C2 4AU 1302 A 1 HETATM 3 C C3 4AU . . . B 2 21.44 35.651 -10.181 1 69.5 ? C3 4AU 1302 A 1 HETATM 4 C C4 4AU . . . B 2 21.723 34.827 -11.259 1 71.33 ? C4 4AU 1302 A 1 HETATM 5 C C5 4AU . . . B 2 21.018 34.928 -12.445 1 73.45 ? C5 4AU 1302 A 1 HETATM 6 C C6 4AU . . . B 2 20.024 35.881 -12.542 1 73.41 ? C6 4AU 1302 A 1 HETATM 7 C C8 4AU . . . B 2 23.051 34.311 -9.583 1 67.75 ? C8 4AU 1302 A 1 HETATM 8 N N17 4AU . . . B 2 22.287 35.335 -9.104 1 67.01 ? N17 4AU 1302 A 1 HETATM 9 C C10 4AU . . . B 2 24.119 33.6 -8.879 1 65.79 ? C10 4AU 1302 A 1 HETATM 10 C C11 4AU . . . B 2 24.402 33.903 -7.464 1 64.7 ? C11 4AU 1302 A 1 HETATM 11 C C12 4AU . . . B 2 23.788 34.74 -6.531 1 62.96 ? C12 4AU 1302 A 1 HETATM 12 C C13 4AU . . . B 2 24.483 34.616 -5.333 1 64.48 ? C13 4AU 1302 A 1 HETATM 13 C C14 4AU . . . B 2 25.519 33.702 -5.551 1 64.93 ? C14 4AU 1302 A 1 HETATM 14 N N7 4AU . . . B 2 25.455 33.28 -6.838 1 63.05 ? N7 4AU 1302 A 1 HETATM 15 N N9 4AU . . . B 2 22.73 33.991 -10.873 1 68.45 ? N9 4AU 1302 A 1 HETATM 16 O O16 4AU . . . B 2 24.745 32.769 -9.496 1 58 ? O16 4AU 1302 A 1 HETATM 17 H H21 4AU . . . B 2 26.057 32.645 -7.25 1 64.05 ? H21 4AU 1302 A 1 HETATM 18 H H23 4AU . . . B 2 22.927 35.365 -6.709 1 63.88 ? H23 4AU 1302 A 1 HETATM 19 H H24 4AU . . . B 2 24.267 35.133 -4.41 1 64.18 ? H24 4AU 1302 A 1 HETATM 20 H H25 4AU . . . B 2 26.26 33.369 -4.838 1 64.28 ? H25 4AU 1302 A 1 HETATM 21 H H26 4AU . . . B 2 23.144 33.309 -11.409 1 69.07 ? H26 4AU 1302 A 1 HETATM 22 H H1 4AU . . . B 2 18.964 37.455 -11.569 1 72 ? H1 4AU 1302 A 1 HETATM 23 H H2 4AU . . . B 2 20.209 37.259 -9.458 1 70.54 ? H2 4AU 1302 A 1 HETATM 24 H H6 4AU . . . B 2 19.469 35.985 -13.463 1 73.12 ? H6 4AU 1302 A 1 HETATM 25 H H5 4AU . . . B 2 21.24 34.289 -13.279 1 72.84 ? H5 4AU 1302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #