data_4AW0 # _model_server_result.job_id n9A8fYmDj_kuNoyjIsYTow _model_server_result.datetime_utc '2024-11-06 13:43:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4aw0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":900}' # _entry.id 4AW0 # _exptl.entry_id 4AW0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 152.235 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DITHIANE DIOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.57 _cell.angle_gamma 90 _cell.entry_id 4AW0 _cell.length_a 148.27 _cell.length_b 44.01 _cell.length_c 47.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AW0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 192 A ASN 240 1_555 A N SEP 193 A SEP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale2 A C SEP 193 A SEP 241 1_555 A N PHE 194 A PHE 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 A C ALA 211 A ALA 259 1_555 A N CME 212 A CME 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale4 A C CME 212 A CME 260 1_555 A N LYS 213 A LYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD1 ASN 162 A ASN 210 1_555 F MG MG . A MG 850 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc2 A OD1 ASP 175 A ASP 223 1_555 E MG MG . A MG 800 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc3 A OD2 ASP 175 A ASP 223 1_555 E MG MG . A MG 800 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc4 A OD2 ASP 175 A ASP 223 1_555 F MG MG . A MG 850 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc5 B O2B ATP . A ATP 500 1_555 E MG MG . A MG 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc6 B O2A ATP . A ATP 500 1_555 E MG MG . A MG 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc7 B O2B ATP . A ATP 500 1_555 F MG MG . A MG 850 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? # _chem_comp.formula 'C4 H8 O2 S2' _chem_comp.formula_weight 152.235 _chem_comp.id DTD _chem_comp.mon_nstd_flag . _chem_comp.name 'DITHIANE DIOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTD sing 162 n n S1 S4 DTD sing 163 n n C1 C2 DTD sing 164 n n C1 H11 DTD sing 165 n n C1 H12 DTD sing 166 n n C2 O2 DTD sing 167 n n C2 C3 DTD sing 168 n n C2 H21 DTD sing 169 n n O2 HO2 DTD sing 170 n n C3 O3 DTD sing 171 n n C3 C4 DTD sing 172 n n C3 H31 DTD sing 173 n n O3 HO3 DTD sing 174 n n C4 S4 DTD sing 175 n n C4 H41 DTD sing 176 n n C4 H42 DTD sing 177 n n # _atom_sites.entry_id 4AW0 _atom_sites.fract_transf_matrix[1][1] 0.006744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001381 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 500 500 ATP ATP . C 3 MJF A 1 600 600 MJF MJF . D 4 DMS A 1 700 700 DMS DMS . E 5 MG A 1 800 800 MG MG . F 5 MG A 1 850 850 MG MG . G 6 DTD A 1 900 900 DTD DTD . H 7 HOH A 1 2001 2001 HOH HOH . H 7 HOH A 2 2002 2002 HOH HOH . H 7 HOH A 3 2003 2003 HOH HOH . H 7 HOH A 4 2004 2004 HOH HOH . H 7 HOH A 5 2005 2005 HOH HOH . H 7 HOH A 6 2006 2006 HOH HOH . H 7 HOH A 7 2007 2007 HOH HOH . H 7 HOH A 8 2008 2008 HOH HOH . H 7 HOH A 9 2009 2009 HOH HOH . H 7 HOH A 10 2010 2010 HOH HOH . H 7 HOH A 11 2011 2011 HOH HOH . H 7 HOH A 12 2012 2012 HOH HOH . H 7 HOH A 13 2013 2013 HOH HOH . H 7 HOH A 14 2014 2014 HOH HOH . H 7 HOH A 15 2015 2015 HOH HOH . H 7 HOH A 16 2016 2016 HOH HOH . H 7 HOH A 17 2017 2017 HOH HOH . H 7 HOH A 18 2018 2018 HOH HOH . H 7 HOH A 19 2019 2019 HOH HOH . H 7 HOH A 20 2020 2020 HOH HOH . H 7 HOH A 21 2021 2021 HOH HOH . H 7 HOH A 22 2022 2022 HOH HOH . H 7 HOH A 23 2023 2023 HOH HOH . H 7 HOH A 24 2024 2024 HOH HOH . H 7 HOH A 25 2025 2025 HOH HOH . H 7 HOH A 26 2026 2026 HOH HOH . H 7 HOH A 27 2027 2027 HOH HOH . H 7 HOH A 28 2028 2028 HOH HOH . H 7 HOH A 29 2029 2029 HOH HOH . H 7 HOH A 30 2030 2030 HOH HOH . H 7 HOH A 31 2031 2031 HOH HOH . H 7 HOH A 32 2032 2032 HOH HOH . H 7 HOH A 33 2033 2033 HOH HOH . H 7 HOH A 34 2034 2034 HOH HOH . H 7 HOH A 35 2035 2035 HOH HOH . H 7 HOH A 36 2037 2037 HOH HOH . H 7 HOH A 37 2038 2038 HOH HOH . H 7 HOH A 38 2039 2039 HOH HOH . H 7 HOH A 39 2040 2040 HOH HOH . H 7 HOH A 40 2041 2041 HOH HOH . H 7 HOH A 41 2042 2042 HOH HOH . H 7 HOH A 42 2043 2043 HOH HOH . H 7 HOH A 43 2044 2044 HOH HOH . H 7 HOH A 44 2045 2045 HOH HOH . H 7 HOH A 45 2046 2046 HOH HOH . H 7 HOH A 46 2047 2047 HOH HOH . H 7 HOH A 47 2048 2048 HOH HOH . H 7 HOH A 48 2049 2049 HOH HOH . H 7 HOH A 49 2050 2050 HOH HOH . H 7 HOH A 50 2051 2051 HOH HOH . H 7 HOH A 51 2052 2052 HOH HOH . H 7 HOH A 52 2053 2053 HOH HOH . H 7 HOH A 53 2054 2054 HOH HOH . H 7 HOH A 54 2055 2055 HOH HOH . H 7 HOH A 55 2056 2056 HOH HOH . H 7 HOH A 56 2057 2057 HOH HOH . H 7 HOH A 57 2058 2058 HOH HOH . H 7 HOH A 58 2059 2059 HOH HOH . H 7 HOH A 59 2060 2060 HOH HOH . H 7 HOH A 60 2062 2062 HOH HOH . H 7 HOH A 61 2063 2063 HOH HOH . H 7 HOH A 62 2064 2064 HOH HOH . H 7 HOH A 63 2065 2065 HOH HOH . H 7 HOH A 64 2066 2066 HOH HOH . H 7 HOH A 65 2067 2067 HOH HOH . H 7 HOH A 66 2068 2068 HOH HOH . H 7 HOH A 67 2069 2069 HOH HOH . H 7 HOH A 68 2070 2070 HOH HOH . H 7 HOH A 69 2071 2071 HOH HOH . H 7 HOH A 70 2072 2072 HOH HOH . H 7 HOH A 71 2073 2073 HOH HOH . H 7 HOH A 72 2074 2074 HOH HOH . H 7 HOH A 73 2075 2075 HOH HOH . H 7 HOH A 74 2076 2076 HOH HOH . H 7 HOH A 75 2077 2077 HOH HOH . H 7 HOH A 76 2078 2078 HOH HOH . H 7 HOH A 77 2079 2079 HOH HOH . H 7 HOH A 78 2080 2080 HOH HOH . H 7 HOH A 79 2081 2081 HOH HOH . H 7 HOH A 80 2082 2082 HOH HOH . H 7 HOH A 81 2083 2083 HOH HOH . H 7 HOH A 82 2084 2084 HOH HOH . H 7 HOH A 83 2085 2085 HOH HOH . H 7 HOH A 84 2086 2086 HOH HOH . H 7 HOH A 85 2087 2087 HOH HOH . H 7 HOH A 86 2088 2088 HOH HOH . H 7 HOH A 87 2089 2089 HOH HOH . H 7 HOH A 88 2090 2090 HOH HOH . H 7 HOH A 89 2091 2091 HOH HOH . H 7 HOH A 90 2092 2092 HOH HOH . H 7 HOH A 91 2093 2093 HOH HOH . H 7 HOH A 92 2094 2094 HOH HOH . H 7 HOH A 93 2095 2095 HOH HOH . H 7 HOH A 94 2096 2096 HOH HOH . H 7 HOH A 95 2097 2097 HOH HOH . H 7 HOH A 96 2098 2098 HOH HOH . H 7 HOH A 97 2099 2099 HOH HOH . H 7 HOH A 98 2100 2100 HOH HOH . H 7 HOH A 99 2101 2101 HOH HOH . H 7 HOH A 100 2102 2102 HOH HOH . H 7 HOH A 101 2103 2103 HOH HOH . H 7 HOH A 102 2104 2104 HOH HOH . H 7 HOH A 103 2105 2105 HOH HOH . H 7 HOH A 104 2106 2106 HOH HOH . H 7 HOH A 105 2107 2107 HOH HOH . H 7 HOH A 106 2108 2108 HOH HOH . H 7 HOH A 107 2109 2109 HOH HOH . H 7 HOH A 108 2110 2110 HOH HOH . H 7 HOH A 109 2111 2111 HOH HOH . H 7 HOH A 110 2112 2112 HOH HOH . H 7 HOH A 111 2113 2113 HOH HOH . H 7 HOH A 112 2114 2114 HOH HOH . H 7 HOH A 113 2115 2115 HOH HOH . H 7 HOH A 114 2116 2116 HOH HOH . H 7 HOH A 115 2117 2117 HOH HOH . H 7 HOH A 116 2118 2118 HOH HOH . H 7 HOH A 117 2119 2119 HOH HOH . H 7 HOH A 118 2120 2120 HOH HOH . H 7 HOH A 119 2122 2122 HOH HOH . H 7 HOH A 120 2123 2123 HOH HOH . H 7 HOH A 121 2124 2124 HOH HOH . H 7 HOH A 122 2125 2125 HOH HOH . H 7 HOH A 123 2126 2126 HOH HOH . H 7 HOH A 124 2127 2127 HOH HOH . H 7 HOH A 125 2128 2128 HOH HOH . H 7 HOH A 126 2129 2129 HOH HOH . H 7 HOH A 127 2130 2130 HOH HOH . H 7 HOH A 128 2131 2131 HOH HOH . H 7 HOH A 129 2132 2132 HOH HOH . H 7 HOH A 130 2133 2133 HOH HOH . H 7 HOH A 131 2134 2134 HOH HOH . H 7 HOH A 132 2135 2135 HOH HOH . H 7 HOH A 133 2136 2136 HOH HOH . H 7 HOH A 134 2137 2137 HOH HOH . H 7 HOH A 135 2138 2138 HOH HOH . H 7 HOH A 136 2139 2139 HOH HOH . H 7 HOH A 137 2140 2140 HOH HOH . H 7 HOH A 138 2141 2141 HOH HOH . H 7 HOH A 139 2142 2142 HOH HOH . H 7 HOH A 140 2143 2143 HOH HOH . H 7 HOH A 141 2144 2144 HOH HOH . H 7 HOH A 142 2145 2145 HOH HOH . H 7 HOH A 143 2146 2146 HOH HOH . H 7 HOH A 144 2147 2147 HOH HOH . H 7 HOH A 145 2148 2148 HOH HOH . H 7 HOH A 146 2149 2149 HOH HOH . H 7 HOH A 147 2150 2150 HOH HOH . H 7 HOH A 148 2151 2151 HOH HOH . H 7 HOH A 149 2152 2152 HOH HOH . H 7 HOH A 150 2153 2153 HOH HOH . H 7 HOH A 151 2154 2154 HOH HOH . H 7 HOH A 152 2155 2155 HOH HOH . H 7 HOH A 153 2156 2156 HOH HOH . H 7 HOH A 154 2157 2157 HOH HOH . H 7 HOH A 155 2158 2158 HOH HOH . H 7 HOH A 156 2159 2159 HOH HOH . H 7 HOH A 157 2160 2160 HOH HOH . H 7 HOH A 158 2161 2161 HOH HOH . H 7 HOH A 159 2162 2162 HOH HOH . H 7 HOH A 160 2163 2163 HOH HOH . H 7 HOH A 161 2164 2164 HOH HOH . H 7 HOH A 162 2165 2165 HOH HOH . H 7 HOH A 163 2166 2166 HOH HOH . H 7 HOH A 164 2167 2167 HOH HOH . H 7 HOH A 165 2168 2168 HOH HOH . H 7 HOH A 166 2169 2169 HOH HOH . H 7 HOH A 167 2170 2170 HOH HOH . H 7 HOH A 168 2171 2171 HOH HOH . H 7 HOH A 169 2172 2172 HOH HOH . H 7 HOH A 170 2173 2173 HOH HOH . H 7 HOH A 171 2175 2175 HOH HOH . H 7 HOH A 172 2176 2176 HOH HOH . H 7 HOH A 173 2177 2177 HOH HOH . H 7 HOH A 174 2178 2178 HOH HOH . H 7 HOH A 175 2179 2179 HOH HOH . H 7 HOH A 176 2180 2180 HOH HOH . H 7 HOH A 177 2181 2181 HOH HOH . H 7 HOH A 178 2182 2182 HOH HOH . H 7 HOH A 179 2183 2183 HOH HOH . H 7 HOH A 180 2184 2184 HOH HOH . H 7 HOH A 181 2185 2185 HOH HOH . H 7 HOH A 182 2186 2186 HOH HOH . H 7 HOH A 183 2187 2187 HOH HOH . H 7 HOH A 184 2188 2188 HOH HOH . H 7 HOH A 185 2189 2189 HOH HOH . H 7 HOH A 186 2190 2190 HOH HOH . H 7 HOH A 187 2191 2191 HOH HOH . H 7 HOH A 188 2192 2192 HOH HOH . H 7 HOH A 189 2193 2193 HOH HOH . H 7 HOH A 190 2194 2194 HOH HOH . H 7 HOH A 191 2195 2195 HOH HOH . H 7 HOH A 192 2196 2196 HOH HOH . H 7 HOH A 193 2197 2197 HOH HOH . H 7 HOH A 194 2198 2198 HOH HOH . H 7 HOH A 195 2199 2199 HOH HOH . H 7 HOH A 196 2200 2200 HOH HOH . H 7 HOH A 197 2201 2201 HOH HOH . H 7 HOH A 198 2202 2202 HOH HOH . H 7 HOH A 199 2203 2203 HOH HOH . H 7 HOH A 200 2204 2204 HOH HOH . H 7 HOH A 201 2205 2205 HOH HOH . H 7 HOH A 202 2206 2206 HOH HOH . H 7 HOH A 203 2207 2207 HOH HOH . H 7 HOH A 204 2208 2208 HOH HOH . H 7 HOH A 205 2209 2209 HOH HOH . H 7 HOH A 206 2210 2210 HOH HOH . H 7 HOH A 207 2211 2211 HOH HOH . H 7 HOH A 208 2212 2212 HOH HOH . H 7 HOH A 209 2213 2213 HOH HOH . H 7 HOH A 210 2214 2214 HOH HOH . H 7 HOH A 211 2215 2215 HOH HOH . H 7 HOH A 212 2216 2216 HOH HOH . H 7 HOH A 213 2218 2218 HOH HOH . H 7 HOH A 214 2219 2219 HOH HOH . H 7 HOH A 215 2220 2220 HOH HOH . H 7 HOH A 216 2221 2221 HOH HOH . H 7 HOH A 217 2222 2222 HOH HOH . H 7 HOH A 218 2223 2223 HOH HOH . H 7 HOH A 219 2224 2224 HOH HOH . H 7 HOH A 220 2225 2225 HOH HOH . H 7 HOH A 221 2226 2226 HOH HOH . H 7 HOH A 222 2227 2227 HOH HOH . H 7 HOH A 223 2228 2228 HOH HOH . H 7 HOH A 224 2229 2229 HOH HOH . H 7 HOH A 225 2230 2230 HOH HOH . H 7 HOH A 226 2231 2231 HOH HOH . H 7 HOH A 227 2232 2232 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTD . . . G 6 -33.813 26.774 -0.379 1 37.15 ? S1 DTD 900 A 1 HETATM 2 C C1 DTD . . . G 6 -33.781 26.545 -2.125 1 38.9 ? C1 DTD 900 A 1 HETATM 3 C C2 DTD . . . G 6 -33.646 27.869 -2.875 1 44.26 ? C2 DTD 900 A 1 HETATM 4 O O2 DTD . . . G 6 -33.536 27.565 -4.271 1 48.55 ? O2 DTD 900 A 1 HETATM 5 C C3 DTD . . . G 6 -32.42 28.702 -2.533 1 45.82 ? C3 DTD 900 A 1 HETATM 6 O O3 DTD . . . G 6 -32.342 29.76 -3.5 1 48.97 ? O3 DTD 900 A 1 HETATM 7 C C4 DTD . . . G 6 -32.458 29.342 -1.159 1 43.66 ? C4 DTD 900 A 1 HETATM 8 S S4 DTD . . . G 6 -32.418 28.109 0.097 1 37.69 ? S4 DTD 900 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #