data_4AW6
#
_model_server_result.job_id            lkheCOfdbty3ZQ4VVXBWjQ 
_model_server_result.datetime_utc      '2024-11-01 10:29:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4aw6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1474}' 
#
_entry.id    4AW6 
#
_exptl.entry_id    4AW6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              790.145 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         76.73 
_cell.angle_beta          79.64 
_cell.angle_gamma         72.61 
_cell.entry_id            4AW6 
_cell.length_a            60.987 
_cell.length_b            95.451 
_cell.length_c            131.095 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4AW6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
PISA dimeric 2 software_defined_assembly 5 
PISA dimeric 2 software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F 1 1 
B,G,H 2 1 
C,I,J 3 1 
D,K,L 4 1 
A,B,E,F,G,H 5 1 
C,D,I,J,K,L 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 335 A HIS 335 1_555 E ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc2 A NE2 HIS 339 A HIS 339 1_555 E ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc3 A OE1 GLU 415 A GLU 415 1_555 E ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? 
metalc ? metalc4 A OE2 GLU 415 A GLU 415 1_555 E ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc5 B NE2 HIS 335 B HIS 335 1_555 G ZN ZN . B ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc6 B NE2 HIS 339 B HIS 339 1_555 G ZN ZN . B ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc7 B OE1 GLU 415 B GLU 415 1_555 G ZN ZN . B ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc8 B OE2 GLU 415 B GLU 415 1_555 G ZN ZN . B ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc9 C NE2 HIS 335 D HIS 335 1_555 I ZN ZN . D ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc10 C NE2 HIS 339 D HIS 339 1_555 I ZN ZN . D ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc11 C OE1 GLU 415 D GLU 415 1_555 I ZN ZN . D ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc12 C OE2 GLU 415 D GLU 415 1_555 I ZN ZN . D ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc13 D NE2 HIS 335 E HIS 335 1_555 K ZN ZN . E ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc14 D NE2 HIS 339 E HIS 339 1_555 K ZN ZN . E ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc15 D OE2 GLU 415 E GLU 415 1_555 K ZN ZN . E ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'C44 H88 N O8 P' 
_chem_comp.formula_weight    790.145 
_chem_comp.id                PC1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLCHOLINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O12 P PC1 sing 235 n n 
P O14 PC1 doub 236 n n 
P O13 PC1 sing 237 n n 
P O11 PC1 sing 238 n n 
O13 C11 PC1 sing 239 n n 
C11 C12 PC1 sing 240 n n 
C11 H111 PC1 sing 241 n n 
C11 H112 PC1 sing 242 n n 
C12 N PC1 sing 243 n n 
C12 H121 PC1 sing 244 n n 
C12 H122 PC1 sing 245 n n 
N C13 PC1 sing 246 n n 
N C14 PC1 sing 247 n n 
N C15 PC1 sing 248 n n 
C13 H131 PC1 sing 249 n n 
C13 H132 PC1 sing 250 n n 
C13 H133 PC1 sing 251 n n 
C14 H141 PC1 sing 252 n n 
C14 H142 PC1 sing 253 n n 
C14 H143 PC1 sing 254 n n 
C15 H151 PC1 sing 255 n n 
C15 H152 PC1 sing 256 n n 
C15 H153 PC1 sing 257 n n 
O11 C1 PC1 sing 258 n n 
C1 C2 PC1 sing 259 n n 
C1 H11 PC1 sing 260 n n 
C1 H12 PC1 sing 261 n n 
C2 O21 PC1 sing 262 n n 
C2 C3 PC1 sing 263 n n 
C2 H2 PC1 sing 264 n n 
O21 C21 PC1 sing 265 n n 
C21 O22 PC1 doub 266 n n 
C21 C22 PC1 sing 267 n n 
C22 C23 PC1 sing 268 n n 
C22 H221 PC1 sing 269 n n 
C22 H222 PC1 sing 270 n n 
C23 C24 PC1 sing 271 n n 
C23 H231 PC1 sing 272 n n 
C23 H232 PC1 sing 273 n n 
C24 C25 PC1 sing 274 n n 
C24 H241 PC1 sing 275 n n 
C24 H242 PC1 sing 276 n n 
C25 C26 PC1 sing 277 n n 
C25 H251 PC1 sing 278 n n 
C25 H252 PC1 sing 279 n n 
C26 C27 PC1 sing 280 n n 
C26 H261 PC1 sing 281 n n 
C26 H262 PC1 sing 282 n n 
C27 C28 PC1 sing 283 n n 
C27 H271 PC1 sing 284 n n 
C27 H272 PC1 sing 285 n n 
C28 C29 PC1 sing 286 n n 
C28 H281 PC1 sing 287 n n 
C28 H282 PC1 sing 288 n n 
C29 C2A PC1 sing 289 n n 
C29 H291 PC1 sing 290 n n 
C29 H292 PC1 sing 291 n n 
C2A C2B PC1 sing 292 n n 
C2A H2A1 PC1 sing 293 n n 
C2A H2A2 PC1 sing 294 n n 
C2B C2C PC1 sing 295 n n 
C2B H2B1 PC1 sing 296 n n 
C2B H2B2 PC1 sing 297 n n 
C2C C2D PC1 sing 298 n n 
C2C H2C1 PC1 sing 299 n n 
C2C H2C2 PC1 sing 300 n n 
C2D C2E PC1 sing 301 n n 
C2D H2D1 PC1 sing 302 n n 
C2D H2D2 PC1 sing 303 n n 
C2E C2F PC1 sing 304 n n 
C2E H2E1 PC1 sing 305 n n 
C2E H2E2 PC1 sing 306 n n 
C2F C2G PC1 sing 307 n n 
C2F H2F1 PC1 sing 308 n n 
C2F H2F2 PC1 sing 309 n n 
C2G C2H PC1 sing 310 n n 
C2G H2G1 PC1 sing 311 n n 
C2G H2G2 PC1 sing 312 n n 
C2H C2I PC1 sing 313 n n 
C2H H2H1 PC1 sing 314 n n 
C2H H2H2 PC1 sing 315 n n 
C2I H2I1 PC1 sing 316 n n 
C2I H2I2 PC1 sing 317 n n 
C2I H2I3 PC1 sing 318 n n 
C3 O31 PC1 sing 319 n n 
C3 H31 PC1 sing 320 n n 
C3 H32 PC1 sing 321 n n 
O31 C31 PC1 sing 322 n n 
C31 O32 PC1 doub 323 n n 
C31 C32 PC1 sing 324 n n 
C32 C33 PC1 sing 325 n n 
C32 H321 PC1 sing 326 n n 
C32 H322 PC1 sing 327 n n 
C33 C34 PC1 sing 328 n n 
C33 H331 PC1 sing 329 n n 
C33 H332 PC1 sing 330 n n 
C34 C35 PC1 sing 331 n n 
C34 H341 PC1 sing 332 n n 
C34 H342 PC1 sing 333 n n 
C35 C36 PC1 sing 334 n n 
C35 H351 PC1 sing 335 n n 
C35 H352 PC1 sing 336 n n 
C36 C37 PC1 sing 337 n n 
C36 H361 PC1 sing 338 n n 
C36 H362 PC1 sing 339 n n 
C37 C38 PC1 sing 340 n n 
C37 H371 PC1 sing 341 n n 
C37 H372 PC1 sing 342 n n 
C38 C39 PC1 sing 343 n n 
C38 H381 PC1 sing 344 n n 
C38 H382 PC1 sing 345 n n 
C39 C3A PC1 sing 346 n n 
C39 H391 PC1 sing 347 n n 
C39 H392 PC1 sing 348 n n 
C3A C3B PC1 sing 349 n n 
C3A H3A1 PC1 sing 350 n n 
C3A H3A2 PC1 sing 351 n n 
C3B C3C PC1 sing 352 n n 
C3B H3B1 PC1 sing 353 n n 
C3B H3B2 PC1 sing 354 n n 
C3C C3D PC1 sing 355 n n 
C3C H3C1 PC1 sing 356 n n 
C3C H3C2 PC1 sing 357 n n 
C3D C3E PC1 sing 358 n n 
C3D H3D1 PC1 sing 359 n n 
C3D H3D2 PC1 sing 360 n n 
C3E C3F PC1 sing 361 n n 
C3E H3E1 PC1 sing 362 n n 
C3E H3E2 PC1 sing 363 n n 
C3F C3G PC1 sing 364 n n 
C3F H3F1 PC1 sing 365 n n 
C3F H3F2 PC1 sing 366 n n 
C3G C3H PC1 sing 367 n n 
C3G H3G1 PC1 sing 368 n n 
C3G H3G2 PC1 sing 369 n n 
C3H C3I PC1 sing 370 n n 
C3H H3H1 PC1 sing 371 n n 
C3H H3H2 PC1 sing 372 n n 
C3I H3I1 PC1 sing 373 n n 
C3I H3I2 PC1 sing 374 n n 
C3I H3I3 PC1 sing 375 n n 
#
_atom_sites.entry_id                     4AW6 
_atom_sites.fract_transf_matrix[1][1]    0.016397 
_atom_sites.fract_transf_matrix[1][2]    -0.005135 
_atom_sites.fract_transf_matrix[1][3]    -0.002073 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010978 
_atom_sites.fract_transf_matrix[2][3]    -0.002093 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007894 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 1473 1473 ZN ZN . 
F 3 PC1 A 1 1474 1474 PC1 PC1 . 
G 2 ZN B 1 1473 1473 ZN ZN . 
H 3 PC1 B 1 1474 1474 PC1 PC1 . 
I 2 ZN D 1 1472 1472 ZN ZN . 
J 3 PC1 D 1 1473 1473 PC1 PC1 . 
K 2 ZN E 1 1472 1472 ZN ZN . 
L 3 PC1 E 1 1473 1473 PC1 PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C21 PC1 . . . F 3 134.25 224.13 182.448 1 96.31 ? C21 PC1 1474 A 1 
HETATM 2 C C22 PC1 . . . F 3 135.55 224.864 182.12 1 96.52 ? C22 PC1 1474 A 1 
HETATM 3 C C23 PC1 . . . F 3 136.751 223.95 181.887 1 96.21 ? C23 PC1 1474 A 1 
HETATM 4 C C24 PC1 . . . F 3 138.012 224.668 181.432 1 95.68 ? C24 PC1 1474 A 1 
HETATM 5 C C25 PC1 . . . F 3 139.111 223.716 180.975 1 97.08 ? C25 PC1 1474 A 1 
HETATM 6 C C26 PC1 . . . F 3 140.255 224.377 180.214 1 99.05 ? C26 PC1 1474 A 1 
HETATM 7 C C27 PC1 . . . F 3 141.316 225.046 181.096 1 100.18 ? C27 PC1 1474 A 1 
HETATM 8 C C28 PC1 . . . F 3 142.444 225.759 180.338 1 100.32 ? C28 PC1 1474 A 1 
HETATM 9 C C29 PC1 . . . F 3 143.44 224.831 179.631 1 100.85 ? C29 PC1 1474 A 1 
HETATM 10 C C2A PC1 . . . F 3 144.713 225.533 179.189 1 100.44 ? C2A PC1 1474 A 1 
HETATM 11 C C2B PC1 . . . F 3 145.594 224.738 178.224 1 99.28 ? C2B PC1 1474 A 1 
HETATM 12 C C2C PC1 . . . F 3 146.95 225.395 177.99 1 98.7 ? C2C PC1 1474 A 1 
HETATM 13 C C2D PC1 . . . F 3 147.721 224.87 176.79 1 98.44 ? C2D PC1 1474 A 1 
HETATM 14 C C2E PC1 . . . F 3 149.093 225.507 176.614 1 97.66 ? C2E PC1 1474 A 1 
HETATM 15 C C31 PC1 . . . F 3 139.417 228.407 186.211 1 130.83 ? C31 PC1 1474 A 1 
HETATM 16 C C32 PC1 . . . F 3 140.656 228.473 185.329 1 131.31 ? C32 PC1 1474 A 1 
HETATM 17 C C33 PC1 . . . F 3 141.896 227.863 185.959 1 131.3 ? C33 PC1 1474 A 1 
HETATM 18 C C34 PC1 . . . F 3 143.122 227.842 185.057 1 130.83 ? C34 PC1 1474 A 1 
HETATM 19 C C35 PC1 . . . F 3 144.277 227.057 185.643 1 130.51 ? C35 PC1 1474 A 1 
HETATM 20 C C36 PC1 . . . F 3 145.53 227.035 184.797 1 130.88 ? C36 PC1 1474 A 1 
HETATM 21 C C37 PC1 . . . F 3 146.641 226.204 185.41 1 131.74 ? C37 PC1 1474 A 1 
HETATM 22 C C38 PC1 . . . F 3 147.954 226.258 184.661 1 133.09 ? C38 PC1 1474 A 1 
HETATM 23 C C39 PC1 . . . F 3 149.069 225.467 185.323 1 134.28 ? C39 PC1 1474 A 1 
HETATM 24 C C3A PC1 . . . F 3 150.4 225.547 184.592 1 135.38 ? C3A PC1 1474 A 1 
HETATM 25 C C3B PC1 . . . F 3 151.537 224.811 185.279 1 135.85 ? C3B PC1 1474 A 1 
HETATM 26 C C3C PC1 . . . F 3 152.893 225.062 184.651 1 136.31 ? C3C PC1 1474 A 1 
HETATM 27 C C3D PC1 . . . F 3 154.053 224.448 185.403 1 137.19 ? C3D PC1 1474 A 1 
HETATM 28 C C3E PC1 . . . F 3 155.398 224.898 184.887 1 137.83 ? C3E PC1 1474 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           28 
#