data_4AYE
#
_model_server_result.job_id            RYxiXuNM2FKbaC1stPip7g 
_model_server_result.datetime_utc      '2024-12-22 06:22:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4aye 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":1322}' 
#
_entry.id    4AYE 
#
_exptl.entry_id    4AYE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    19 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.74 
_cell.angle_gamma         90 
_cell.entry_id            4AYE 
_cell.length_a            187.413 
_cell.length_b            53.277 
_cell.length_c            130.084 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4AYE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,H,I,J,K,S,T,Z,CA 1 1 
B,C,L,M,N,O,P,Q,R,AA,BA 2 1 
E,F,U,V,W,X,Y,DA,EA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 325 1_555 A SG CYS 56 A CYS 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 39 A CYS 357 1_555 A SG CYS 67 A CYS 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 71 A CYS 389 1_555 A SG CYS 113 A CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf4 A SG CYS 98 A CYS 416 1_555 A SG CYS 124 A CYS 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf5 B SG CYS 7 B CYS 325 1_555 B SG CYS 56 B CYS 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 B SG CYS 39 B CYS 357 1_555 B SG CYS 67 B CYS 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf7 B SG CYS 71 B CYS 389 1_555 B SG CYS 113 B CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf8 B SG CYS 98 B CYS 416 1_555 B SG CYS 124 B CYS 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 E SG CYS 7 E CYS 325 1_555 E SG CYS 56 E CYS 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf10 E SG CYS 39 E CYS 357 1_555 E SG CYS 67 E CYS 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf11 E SG CYS 71 E CYS 389 1_555 E SG CYS 113 E CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf12 E SG CYS 98 E CYS 416 1_555 E SG CYS 124 E CYS 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     4AYE 
_atom_sites.fract_transf_matrix[1][1]    0.005336 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002806 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01877 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008686 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 EDO A 1 1444 1444 EDO EDO . 
H 3 EDO A 1 1445 1445 EDO EDO . 
I 3 EDO A 1 1446 1446 EDO EDO . 
J 3 EDO A 1 1447 1447 EDO EDO . 
K 3 EDO A 1 1448 1448 EDO EDO . 
L 3 EDO B 1 1444 1444 EDO EDO . 
M 3 EDO B 1 1445 1445 EDO EDO . 
N 3 EDO B 1 1446 1446 EDO EDO . 
O 3 EDO B 1 1447 1447 EDO EDO . 
P 3 EDO C 1 1323 1323 EDO EDO . 
Q 3 EDO C 1 1324 1324 EDO EDO . 
R 3 EDO C 1 1325 1325 EDO EDO . 
S 3 EDO D 1 1323 1323 EDO EDO . 
T 3 EDO D 1 1324 1324 EDO EDO . 
U 3 EDO E 1 1444 1444 EDO EDO . 
V 3 EDO E 1 1445 1445 EDO EDO . 
W 3 EDO E 1 1446 1446 EDO EDO . 
X 3 EDO E 1 1447 1447 EDO EDO . 
Y 3 EDO F 1 1322 1322 EDO EDO . 
Z 4 HOH A 1 2001 2001 HOH HOH . 
Z 4 HOH A 2 2002 2002 HOH HOH . 
Z 4 HOH A 3 2003 2003 HOH HOH . 
Z 4 HOH A 4 2004 2004 HOH HOH . 
Z 4 HOH A 5 2005 2005 HOH HOH . 
Z 4 HOH A 6 2006 2006 HOH HOH . 
Z 4 HOH A 7 2007 2007 HOH HOH . 
Z 4 HOH A 8 2008 2008 HOH HOH . 
Z 4 HOH A 9 2009 2009 HOH HOH . 
Z 4 HOH A 10 2010 2010 HOH HOH . 
Z 4 HOH A 11 2011 2011 HOH HOH . 
AA 4 HOH B 1 2001 2001 HOH HOH . 
AA 4 HOH B 2 2002 2002 HOH HOH . 
AA 4 HOH B 3 2003 2003 HOH HOH . 
AA 4 HOH B 4 2004 2004 HOH HOH . 
AA 4 HOH B 5 2005 2005 HOH HOH . 
AA 4 HOH B 6 2006 2006 HOH HOH . 
AA 4 HOH B 7 2007 2007 HOH HOH . 
AA 4 HOH B 8 2008 2008 HOH HOH . 
AA 4 HOH B 9 2009 2009 HOH HOH . 
AA 4 HOH B 10 2010 2010 HOH HOH . 
AA 4 HOH B 11 2011 2011 HOH HOH . 
AA 4 HOH B 12 2012 2012 HOH HOH . 
AA 4 HOH B 13 2013 2013 HOH HOH . 
AA 4 HOH B 14 2014 2014 HOH HOH . 
AA 4 HOH B 15 2015 2015 HOH HOH . 
AA 4 HOH B 16 2016 2016 HOH HOH . 
AA 4 HOH B 17 2017 2017 HOH HOH . 
AA 4 HOH B 18 2018 2018 HOH HOH . 
BA 4 HOH C 1 2001 2001 HOH HOH . 
BA 4 HOH C 2 2002 2002 HOH HOH . 
BA 4 HOH C 3 2003 2003 HOH HOH . 
BA 4 HOH C 4 2004 2004 HOH HOH . 
BA 4 HOH C 5 2005 2005 HOH HOH . 
BA 4 HOH C 6 2006 2006 HOH HOH . 
BA 4 HOH C 7 2007 2007 HOH HOH . 
BA 4 HOH C 8 2008 2008 HOH HOH . 
BA 4 HOH C 9 2009 2009 HOH HOH . 
BA 4 HOH C 10 2010 2010 HOH HOH . 
BA 4 HOH C 11 2011 2011 HOH HOH . 
BA 4 HOH C 12 2012 2012 HOH HOH . 
BA 4 HOH C 13 2013 2013 HOH HOH . 
BA 4 HOH C 14 2014 2014 HOH HOH . 
BA 4 HOH C 15 2015 2015 HOH HOH . 
BA 4 HOH C 16 2016 2016 HOH HOH . 
BA 4 HOH C 17 2017 2017 HOH HOH . 
BA 4 HOH C 18 2018 2018 HOH HOH . 
BA 4 HOH C 19 2019 2019 HOH HOH . 
BA 4 HOH C 20 2020 2020 HOH HOH . 
BA 4 HOH C 21 2021 2021 HOH HOH . 
BA 4 HOH C 22 2022 2022 HOH HOH . 
BA 4 HOH C 23 2023 2023 HOH HOH . 
BA 4 HOH C 24 2024 2024 HOH HOH . 
BA 4 HOH C 25 2025 2025 HOH HOH . 
BA 4 HOH C 26 2026 2026 HOH HOH . 
BA 4 HOH C 27 2027 2027 HOH HOH . 
BA 4 HOH C 28 2028 2028 HOH HOH . 
BA 4 HOH C 29 2029 2029 HOH HOH . 
BA 4 HOH C 30 2030 2030 HOH HOH . 
BA 4 HOH C 31 2031 2031 HOH HOH . 
BA 4 HOH C 32 2032 2032 HOH HOH . 
BA 4 HOH C 33 2033 2033 HOH HOH . 
BA 4 HOH C 34 2034 2034 HOH HOH . 
BA 4 HOH C 35 2035 2035 HOH HOH . 
BA 4 HOH C 36 2036 2036 HOH HOH . 
BA 4 HOH C 37 2037 2037 HOH HOH . 
BA 4 HOH C 38 2038 2038 HOH HOH . 
BA 4 HOH C 39 2039 2039 HOH HOH . 
BA 4 HOH C 40 2040 2040 HOH HOH . 
BA 4 HOH C 41 2041 2041 HOH HOH . 
CA 4 HOH D 1 2001 2001 HOH HOH . 
CA 4 HOH D 2 2002 2002 HOH HOH . 
CA 4 HOH D 3 2003 2003 HOH HOH . 
CA 4 HOH D 4 2004 2004 HOH HOH . 
CA 4 HOH D 5 2005 2005 HOH HOH . 
CA 4 HOH D 6 2006 2006 HOH HOH . 
CA 4 HOH D 7 2007 2007 HOH HOH . 
CA 4 HOH D 8 2008 2008 HOH HOH . 
CA 4 HOH D 9 2009 2009 HOH HOH . 
CA 4 HOH D 10 2010 2010 HOH HOH . 
CA 4 HOH D 11 2011 2011 HOH HOH . 
CA 4 HOH D 12 2012 2012 HOH HOH . 
CA 4 HOH D 13 2013 2013 HOH HOH . 
CA 4 HOH D 14 2014 2014 HOH HOH . 
CA 4 HOH D 15 2015 2015 HOH HOH . 
CA 4 HOH D 16 2016 2016 HOH HOH . 
CA 4 HOH D 17 2017 2017 HOH HOH . 
CA 4 HOH D 18 2018 2018 HOH HOH . 
CA 4 HOH D 19 2019 2019 HOH HOH . 
CA 4 HOH D 20 2020 2020 HOH HOH . 
CA 4 HOH D 21 2021 2021 HOH HOH . 
CA 4 HOH D 22 2022 2022 HOH HOH . 
CA 4 HOH D 23 2023 2023 HOH HOH . 
CA 4 HOH D 24 2024 2024 HOH HOH . 
DA 4 HOH E 1 2001 2001 HOH HOH . 
DA 4 HOH E 2 2002 2002 HOH HOH . 
DA 4 HOH E 3 2003 2003 HOH HOH . 
DA 4 HOH E 4 2004 2004 HOH HOH . 
DA 4 HOH E 5 2005 2005 HOH HOH . 
DA 4 HOH E 6 2006 2006 HOH HOH . 
DA 4 HOH E 7 2007 2007 HOH HOH . 
DA 4 HOH E 8 2008 2008 HOH HOH . 
DA 4 HOH E 9 2009 2009 HOH HOH . 
DA 4 HOH E 10 2010 2010 HOH HOH . 
DA 4 HOH E 11 2011 2011 HOH HOH . 
DA 4 HOH E 12 2012 2012 HOH HOH . 
DA 4 HOH E 13 2013 2013 HOH HOH . 
DA 4 HOH E 14 2014 2014 HOH HOH . 
DA 4 HOH E 15 2015 2015 HOH HOH . 
DA 4 HOH E 16 2016 2016 HOH HOH . 
DA 4 HOH E 17 2017 2017 HOH HOH . 
DA 4 HOH E 18 2018 2018 HOH HOH . 
DA 4 HOH E 19 2019 2019 HOH HOH . 
DA 4 HOH E 20 2020 2020 HOH HOH . 
DA 4 HOH E 21 2021 2021 HOH HOH . 
EA 4 HOH F 1 2001 2001 HOH HOH . 
EA 4 HOH F 2 2002 2002 HOH HOH . 
EA 4 HOH F 3 2003 2003 HOH HOH . 
EA 4 HOH F 4 2004 2004 HOH HOH . 
EA 4 HOH F 5 2005 2005 HOH HOH . 
EA 4 HOH F 6 2006 2006 HOH HOH . 
EA 4 HOH F 7 2007 2007 HOH HOH . 
EA 4 HOH F 8 2008 2008 HOH HOH . 
EA 4 HOH F 9 2009 2009 HOH HOH . 
EA 4 HOH F 10 2010 2010 HOH HOH . 
EA 4 HOH F 11 2011 2011 HOH HOH . 
EA 4 HOH F 12 2012 2012 HOH HOH . 
EA 4 HOH F 13 2013 2013 HOH HOH . 
EA 4 HOH F 14 2014 2014 HOH HOH . 
EA 4 HOH F 15 2015 2015 HOH HOH . 
EA 4 HOH F 16 2016 2016 HOH HOH . 
EA 4 HOH F 17 2017 2017 HOH HOH . 
EA 4 HOH F 18 2018 2018 HOH HOH . 
EA 4 HOH F 19 2019 2019 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . Y 3 -50.792 -2.644 -16.758 1 62.36 ? C1 EDO 1322 F 1 
HETATM 2 O O1 EDO . . . Y 3 -52.129 -2.316 -16.405 1 61.32 ? O1 EDO 1322 F 1 
HETATM 3 C C2 EDO . . . Y 3 -50.042 -1.421 -17.347 1 63.17 ? C2 EDO 1322 F 1 
HETATM 4 O O2 EDO . . . Y 3 -50.774 -0.879 -18.435 1 63.84 ? O2 EDO 1322 F 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#