data_4AZL # _model_server_result.job_id 69eG1Ja2gG4K8g4kvvdWXg _model_server_result.datetime_utc '2024-11-06 03:47:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4azl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1493}' # _entry.id 4AZL # _exptl.entry_id 4AZL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.46 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.36 _cell.angle_gamma 90 _cell.entry_id 4AZL _cell.length_a 47.09 _cell.length_b 245.76 _cell.length_c 47.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AZL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,R 1 1 B,J,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 P N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 23 A ASP 55 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.199 ? metalc ? metalc2 A OD2 ASP 23 A ASP 55 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc3 A OD2 ASP 25 A ASP 57 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc4 A O ALA 29 A ALA 61 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? metalc ? metalc5 B OD2 ASP 23 B ASP 55 1_555 O CA CA . B CA 1496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc6 B O ALA 29 B ALA 61 1_555 O CA CA . B CA 1496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? # _chem_comp.formula 'C18 H34 O4' _chem_comp.formula_weight 314.46 _chem_comp.id 78M _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '7.8 MONOACYLGLYCEROL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O21 C20 78M sing 1 n n C20 C18 78M sing 2 n n C18 O19 78M sing 3 n n C18 C17 78M sing 4 n n C17 O2 78M sing 5 n n O2 C1 78M sing 6 n n C1 O1 78M doub 7 n n C1 C2 78M sing 8 n n C2 C3 78M sing 9 n n C3 C4 78M sing 10 n n C4 C5 78M sing 11 n n C5 C6 78M sing 12 n n C6 C7 78M sing 13 n n C7 C8 78M doub 14 z n C8 C9 78M sing 15 n n C9 C10 78M sing 16 n n C10 C11 78M sing 17 n n C11 C12 78M sing 18 n n C12 C13 78M sing 19 n n C15 C14 78M sing 20 n n C13 C14 78M sing 21 n n O21 H21 78M sing 22 n n C20 H201 78M sing 23 n n C20 H202 78M sing 24 n n C18 H18 78M sing 25 n n O19 H19 78M sing 26 n n C17 H171 78M sing 27 n n C17 H172 78M sing 28 n n C2 H21C 78M sing 29 n n C2 H22C 78M sing 30 n n C3 H31C 78M sing 31 n n C3 H32C 78M sing 32 n n C4 H41C 78M sing 33 n n C4 H42C 78M sing 34 n n C5 H51C 78M sing 35 n n C5 H52C 78M sing 36 n n C6 H61C 78M sing 37 n n C6 H62C 78M sing 38 n n C7 H7 78M sing 39 n n C8 H8 78M sing 40 n n C9 H91C 78M sing 41 n n C9 H92C 78M sing 42 n n C10 H101 78M sing 43 n n C10 H102 78M sing 44 n n C11 H111 78M sing 45 n n C11 H112 78M sing 46 n n C12 H121 78M sing 47 n n C12 H122 78M sing 48 n n C13 H131 78M sing 49 n n C13 H132 78M sing 50 n n C15 H151 78M sing 51 n n C15 H152 78M sing 52 n n C15 H153 78M sing 53 n n C14 H141 78M sing 54 n n C14 H142 78M sing 55 n n # _atom_sites.entry_id 4AZL _atom_sites.fract_transf_matrix[1][1] 0.021236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005437 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 78M A 1 1491 1491 78M 78M . D 2 78M A 1 1492 1492 78M 78M . E 2 78M A 1 1493 1493 78M 78M . F 3 CA A 1 1494 1494 CA CA . G 4 78N A 1 1495 1495 78N 78N . H 4 78N A 1 1496 1496 78N 78N . I 4 78N A 1 1497 1497 78N 78N . J 2 78M B 1 1491 1491 78M 78M . K 2 78M B 1 1492 1492 78M 78M . L 2 78M B 1 1493 1493 78M 78M . M 2 78M B 1 1494 1494 78M 78M . N 2 78M B 1 1495 1495 78M 78M . O 3 CA B 1 1496 1496 CA CA . P 2 78M B 1 1497 1497 78M 78M . Q 2 78M B 1 1498 1498 78M 78M . R 5 HOH A 1 2001 2001 HOH HOH . R 5 HOH A 2 2002 2002 HOH HOH . R 5 HOH A 3 2003 2003 HOH HOH . R 5 HOH A 4 2004 2004 HOH HOH . R 5 HOH A 5 2005 2005 HOH HOH . R 5 HOH A 6 2006 2006 HOH HOH . R 5 HOH A 7 2007 2007 HOH HOH . R 5 HOH A 8 2008 2008 HOH HOH . R 5 HOH A 9 2009 2009 HOH HOH . R 5 HOH A 10 2010 2010 HOH HOH . R 5 HOH A 11 2011 2011 HOH HOH . R 5 HOH A 12 2012 2012 HOH HOH . R 5 HOH A 13 2013 2013 HOH HOH . R 5 HOH A 14 2014 2014 HOH HOH . R 5 HOH A 15 2015 2015 HOH HOH . R 5 HOH A 16 2016 2016 HOH HOH . R 5 HOH A 17 2017 2017 HOH HOH . R 5 HOH A 18 2018 2018 HOH HOH . R 5 HOH A 19 2019 2019 HOH HOH . S 5 HOH B 1 2001 2001 HOH HOH . S 5 HOH B 2 2002 2002 HOH HOH . S 5 HOH B 3 2003 2003 HOH HOH . S 5 HOH B 4 2004 2004 HOH HOH . S 5 HOH B 5 2005 2005 HOH HOH . S 5 HOH B 6 2006 2006 HOH HOH . S 5 HOH B 7 2007 2007 HOH HOH . S 5 HOH B 8 2008 2008 HOH HOH . S 5 HOH B 9 2009 2009 HOH HOH . S 5 HOH B 10 2010 2010 HOH HOH . S 5 HOH B 11 2011 2011 HOH HOH . S 5 HOH B 12 2012 2012 HOH HOH . S 5 HOH B 13 2013 2013 HOH HOH . S 5 HOH B 14 2014 2014 HOH HOH . S 5 HOH B 15 2015 2015 HOH HOH . S 5 HOH B 16 2016 2016 HOH HOH . S 5 HOH B 17 2017 2017 HOH HOH . S 5 HOH B 18 2018 2018 HOH HOH . S 5 HOH B 19 2019 2019 HOH HOH . S 5 HOH B 20 2020 2020 HOH HOH . S 5 HOH B 21 2021 2021 HOH HOH . S 5 HOH B 22 2022 2022 HOH HOH . S 5 HOH B 23 2023 2023 HOH HOH . S 5 HOH B 24 2024 2024 HOH HOH . S 5 HOH B 25 2025 2025 HOH HOH . S 5 HOH B 26 2026 2026 HOH HOH . S 5 HOH B 27 2027 2027 HOH HOH . S 5 HOH B 28 2028 2028 HOH HOH . S 5 HOH B 29 2029 2029 HOH HOH . S 5 HOH B 30 2030 2030 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 78M . . . L 2 12.318 52.601 13.455 1 40.2 ? C1 78M 1493 B 1 HETATM 2 C C2 78M . . . L 2 13.033 52.08 12.209 1 40.2 ? C2 78M 1493 B 1 HETATM 3 C C3 78M . . . L 2 14.288 51.282 12.567 1 40.2 ? C3 78M 1493 B 1 HETATM 4 C C4 78M . . . L 2 13.934 49.996 13.309 1 40.2 ? C4 78M 1493 B 1 HETATM 5 C C5 78M . . . L 2 15.177 49.225 13.737 1 40.2 ? C5 78M 1493 B 1 HETATM 6 C C6 78M . . . L 2 14.81 48.164 14.766 1 40.2 ? C6 78M 1493 B 1 HETATM 7 C C7 78M . . . L 2 16.04 47.771 15.547 1 40.2 ? C7 78M 1493 B 1 HETATM 8 C C8 78M . . . L 2 15.915 47.009 16.63 1 40.2 ? C8 78M 1493 B 1 HETATM 9 C C9 78M . . . L 2 17.143 46.614 17.418 1 40.2 ? C9 78M 1493 B 1 HETATM 10 C C10 78M . . . L 2 16.772 46.356 18.875 1 40.2 ? C10 78M 1493 B 1 HETATM 11 C C11 78M . . . L 2 17.973 46.555 19.793 1 40.2 ? C11 78M 1493 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 11 #