data_4AZL # _model_server_result.job_id UtCRWm0FyzuyD3kD6Di-bA _model_server_result.datetime_utc '2024-11-21 14:03:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4azl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1495}' # _entry.id 4AZL # _exptl.entry_id 4AZL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.46 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.36 _cell.angle_gamma 90 _cell.entry_id 4AZL _cell.length_a 47.09 _cell.length_b 245.76 _cell.length_c 47.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AZL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,R 1 1 B,J,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 23 A ASP 55 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.199 ? metalc ? metalc2 A OD2 ASP 23 A ASP 55 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc3 A OD2 ASP 25 A ASP 57 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc4 A O ALA 29 A ALA 61 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? metalc ? metalc5 B OD2 ASP 23 B ASP 55 1_555 O CA CA . B CA 1496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc6 B O ALA 29 B ALA 61 1_555 O CA CA . B CA 1496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? # _chem_comp.formula 'C18 H34 O4' _chem_comp.formula_weight 314.46 _chem_comp.id 78N _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '7.8 MONOACYLGLYCEROL (2R)' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C19 78N sing 56 n n C19 C18 78N sing 57 n n C18 O20 78N sing 58 n n C18 C17 78N sing 59 n n C17 O16 78N sing 60 n n O16 C8 78N sing 61 n n C8 O15 78N doub 62 n n C8 C7 78N sing 63 n n C7 C6 78N sing 64 n n C6 C5 78N sing 65 n n C5 C4 78N sing 66 n n C4 C3 78N sing 67 n n C3 C2 78N sing 68 n n C2 C1 78N doub 69 z n C1 C9 78N sing 70 n n C9 C10 78N sing 71 n n C10 C11 78N sing 72 n n C11 C12 78N sing 73 n n C12 C13 78N sing 74 n n C13 C14 78N sing 75 n n C15 C14 78N sing 76 n n O22 H22 78N sing 77 n n C19 H191 78N sing 78 n n C19 H192 78N sing 79 n n C18 H18 78N sing 80 n n O20 H20 78N sing 81 n n C17 H171 78N sing 82 n n C17 H172 78N sing 83 n n C7 H71 78N sing 84 n n C7 H72 78N sing 85 n n C6 H61C 78N sing 86 n n C6 H62C 78N sing 87 n n C5 H51C 78N sing 88 n n C5 H52C 78N sing 89 n n C4 H41C 78N sing 90 n n C4 H42C 78N sing 91 n n C3 H31C 78N sing 92 n n C3 H32C 78N sing 93 n n C2 H2 78N sing 94 n n C1 H1 78N sing 95 n n C9 H91C 78N sing 96 n n C9 H92C 78N sing 97 n n C10 H101 78N sing 98 n n C10 H102 78N sing 99 n n C11 H111 78N sing 100 n n C11 H112 78N sing 101 n n C12 H121 78N sing 102 n n C12 H122 78N sing 103 n n C13 H131 78N sing 104 n n C13 H132 78N sing 105 n n C14 H141 78N sing 106 n n C14 H142 78N sing 107 n n C15 H151 78N sing 108 n n C15 H152 78N sing 109 n n C15 H153 78N sing 110 n n # _atom_sites.entry_id 4AZL _atom_sites.fract_transf_matrix[1][1] 0.021236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005437 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 78M A 1 1491 1491 78M 78M . D 2 78M A 1 1492 1492 78M 78M . E 2 78M A 1 1493 1493 78M 78M . F 3 CA A 1 1494 1494 CA CA . G 4 78N A 1 1495 1495 78N 78N . H 4 78N A 1 1496 1496 78N 78N . I 4 78N A 1 1497 1497 78N 78N . J 2 78M B 1 1491 1491 78M 78M . K 2 78M B 1 1492 1492 78M 78M . L 2 78M B 1 1493 1493 78M 78M . M 2 78M B 1 1494 1494 78M 78M . N 2 78M B 1 1495 1495 78M 78M . O 3 CA B 1 1496 1496 CA CA . P 2 78M B 1 1497 1497 78M 78M . Q 2 78M B 1 1498 1498 78M 78M . R 5 HOH A 1 2001 2001 HOH HOH . R 5 HOH A 2 2002 2002 HOH HOH . R 5 HOH A 3 2003 2003 HOH HOH . R 5 HOH A 4 2004 2004 HOH HOH . R 5 HOH A 5 2005 2005 HOH HOH . R 5 HOH A 6 2006 2006 HOH HOH . R 5 HOH A 7 2007 2007 HOH HOH . R 5 HOH A 8 2008 2008 HOH HOH . R 5 HOH A 9 2009 2009 HOH HOH . R 5 HOH A 10 2010 2010 HOH HOH . R 5 HOH A 11 2011 2011 HOH HOH . R 5 HOH A 12 2012 2012 HOH HOH . R 5 HOH A 13 2013 2013 HOH HOH . R 5 HOH A 14 2014 2014 HOH HOH . R 5 HOH A 15 2015 2015 HOH HOH . R 5 HOH A 16 2016 2016 HOH HOH . R 5 HOH A 17 2017 2017 HOH HOH . R 5 HOH A 18 2018 2018 HOH HOH . R 5 HOH A 19 2019 2019 HOH HOH . S 5 HOH B 1 2001 2001 HOH HOH . S 5 HOH B 2 2002 2002 HOH HOH . S 5 HOH B 3 2003 2003 HOH HOH . S 5 HOH B 4 2004 2004 HOH HOH . S 5 HOH B 5 2005 2005 HOH HOH . S 5 HOH B 6 2006 2006 HOH HOH . S 5 HOH B 7 2007 2007 HOH HOH . S 5 HOH B 8 2008 2008 HOH HOH . S 5 HOH B 9 2009 2009 HOH HOH . S 5 HOH B 10 2010 2010 HOH HOH . S 5 HOH B 11 2011 2011 HOH HOH . S 5 HOH B 12 2012 2012 HOH HOH . S 5 HOH B 13 2013 2013 HOH HOH . S 5 HOH B 14 2014 2014 HOH HOH . S 5 HOH B 15 2015 2015 HOH HOH . S 5 HOH B 16 2016 2016 HOH HOH . S 5 HOH B 17 2017 2017 HOH HOH . S 5 HOH B 18 2018 2018 HOH HOH . S 5 HOH B 19 2019 2019 HOH HOH . S 5 HOH B 20 2020 2020 HOH HOH . S 5 HOH B 21 2021 2021 HOH HOH . S 5 HOH B 22 2022 2022 HOH HOH . S 5 HOH B 23 2023 2023 HOH HOH . S 5 HOH B 24 2024 2024 HOH HOH . S 5 HOH B 25 2025 2025 HOH HOH . S 5 HOH B 26 2026 2026 HOH HOH . S 5 HOH B 27 2027 2027 HOH HOH . S 5 HOH B 28 2028 2028 HOH HOH . S 5 HOH B 29 2029 2029 HOH HOH . S 5 HOH B 30 2030 2030 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 78N . . . G 4 11.472 -14.618 21.24 1 55.69 ? O22 78N 1495 A 1 HETATM 2 C C19 78N . . . G 4 10.869 -13.562 22.007 1 55.69 ? C19 78N 1495 A 1 HETATM 3 C C18 78N . . . G 4 11.9 -12.477 22.312 1 55.69 ? C18 78N 1495 A 1 HETATM 4 O O20 78N . . . G 4 12.43 -11.977 21.079 1 55.69 ? O20 78N 1495 A 1 HETATM 5 C C17 78N . . . G 4 11.25 -11.318 23.061 1 55.69 ? C17 78N 1495 A 1 HETATM 6 O O16 78N . . . G 4 10.27 -10.72 22.211 1 55.69 ? O16 78N 1495 A 1 HETATM 7 C C8 78N . . . G 4 9.766 -9.377 22.465 1 55.69 ? C8 78N 1495 A 1 HETATM 8 O O15 78N . . . G 4 8.579 -9.154 22.301 1 55.69 ? O15 78N 1495 A 1 HETATM 9 C C7 78N . . . G 4 10.692 -8.268 22.904 1 55.69 ? C7 78N 1495 A 1 HETATM 10 C C6 78N . . . G 4 10.326 -6.987 22.16 1 55.69 ? C6 78N 1495 A 1 HETATM 11 C C5 78N . . . G 4 11.574 -6.167 21.851 1 55.69 ? C5 78N 1495 A 1 HETATM 12 C C4 78N . . . G 4 11.236 -4.735 21.446 1 55.69 ? C4 78N 1495 A 1 HETATM 13 C C3 78N . . . G 4 10.31 -4.681 20.234 1 55.69 ? C3 78N 1495 A 1 HETATM 14 C C2 78N . . . G 4 10.859 -3.701 19.222 1 55.69 ? C2 78N 1495 A 1 HETATM 15 C C1 78N . . . G 4 10.041 -3.048 18.399 1 55.69 ? C1 78N 1495 A 1 HETATM 16 C C9 78N . . . G 4 8.549 -3.269 18.473 1 55.69 ? C9 78N 1495 A 1 HETATM 17 C C10 78N . . . G 4 7.842 -2.37 17.464 1 55.69 ? C10 78N 1495 A 1 HETATM 18 C C11 78N . . . G 4 7.073 -1.221 18.107 1 55.69 ? C11 78N 1495 A 1 HETATM 19 C C12 78N . . . G 4 6.972 -1.337 19.624 1 55.69 ? C12 78N 1495 A 1 HETATM 20 C C13 78N . . . G 4 6.55 0 20.227 1 55.69 ? C13 78N 1495 A 1 HETATM 21 C C15 78N . . . G 4 5.088 1.998 19.808 1 55.69 ? C15 78N 1495 A 1 HETATM 22 C C14 78N . . . G 4 5.255 0.507 19.598 1 55.69 ? C14 78N 1495 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #