data_4AZL # _model_server_result.job_id NKfE7ioYhTSPrAGBnTtziw _model_server_result.datetime_utc '2024-11-21 14:14:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4azl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1496}' # _entry.id 4AZL # _exptl.entry_id 4AZL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.36 _cell.angle_gamma 90 _cell.entry_id 4AZL _cell.length_a 47.09 _cell.length_b 245.76 _cell.length_c 47.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AZL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,R 1 1 B,J,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 23 A ASP 55 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.199 ? metalc ? metalc2 A OD2 ASP 23 A ASP 55 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc3 A OD2 ASP 25 A ASP 57 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc4 A O ALA 29 A ALA 61 1_555 F CA CA . A CA 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? metalc ? metalc5 B OD2 ASP 23 B ASP 55 1_555 O CA CA . B CA 1496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc6 B O ALA 29 B ALA 61 1_555 O CA CA . B CA 1496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4AZL _atom_sites.fract_transf_matrix[1][1] 0.021236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005437 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 78M A 1 1491 1491 78M 78M . D 2 78M A 1 1492 1492 78M 78M . E 2 78M A 1 1493 1493 78M 78M . F 3 CA A 1 1494 1494 CA CA . G 4 78N A 1 1495 1495 78N 78N . H 4 78N A 1 1496 1496 78N 78N . I 4 78N A 1 1497 1497 78N 78N . J 2 78M B 1 1491 1491 78M 78M . K 2 78M B 1 1492 1492 78M 78M . L 2 78M B 1 1493 1493 78M 78M . M 2 78M B 1 1494 1494 78M 78M . N 2 78M B 1 1495 1495 78M 78M . O 3 CA B 1 1496 1496 CA CA . P 2 78M B 1 1497 1497 78M 78M . Q 2 78M B 1 1498 1498 78M 78M . R 5 HOH A 1 2001 2001 HOH HOH . R 5 HOH A 2 2002 2002 HOH HOH . R 5 HOH A 3 2003 2003 HOH HOH . R 5 HOH A 4 2004 2004 HOH HOH . R 5 HOH A 5 2005 2005 HOH HOH . R 5 HOH A 6 2006 2006 HOH HOH . R 5 HOH A 7 2007 2007 HOH HOH . R 5 HOH A 8 2008 2008 HOH HOH . R 5 HOH A 9 2009 2009 HOH HOH . R 5 HOH A 10 2010 2010 HOH HOH . R 5 HOH A 11 2011 2011 HOH HOH . R 5 HOH A 12 2012 2012 HOH HOH . R 5 HOH A 13 2013 2013 HOH HOH . R 5 HOH A 14 2014 2014 HOH HOH . R 5 HOH A 15 2015 2015 HOH HOH . R 5 HOH A 16 2016 2016 HOH HOH . R 5 HOH A 17 2017 2017 HOH HOH . R 5 HOH A 18 2018 2018 HOH HOH . R 5 HOH A 19 2019 2019 HOH HOH . S 5 HOH B 1 2001 2001 HOH HOH . S 5 HOH B 2 2002 2002 HOH HOH . S 5 HOH B 3 2003 2003 HOH HOH . S 5 HOH B 4 2004 2004 HOH HOH . S 5 HOH B 5 2005 2005 HOH HOH . S 5 HOH B 6 2006 2006 HOH HOH . S 5 HOH B 7 2007 2007 HOH HOH . S 5 HOH B 8 2008 2008 HOH HOH . S 5 HOH B 9 2009 2009 HOH HOH . S 5 HOH B 10 2010 2010 HOH HOH . S 5 HOH B 11 2011 2011 HOH HOH . S 5 HOH B 12 2012 2012 HOH HOH . S 5 HOH B 13 2013 2013 HOH HOH . S 5 HOH B 14 2014 2014 HOH HOH . S 5 HOH B 15 2015 2015 HOH HOH . S 5 HOH B 16 2016 2016 HOH HOH . S 5 HOH B 17 2017 2017 HOH HOH . S 5 HOH B 18 2018 2018 HOH HOH . S 5 HOH B 19 2019 2019 HOH HOH . S 5 HOH B 20 2020 2020 HOH HOH . S 5 HOH B 21 2021 2021 HOH HOH . S 5 HOH B 22 2022 2022 HOH HOH . S 5 HOH B 23 2023 2023 HOH HOH . S 5 HOH B 24 2024 2024 HOH HOH . S 5 HOH B 25 2025 2025 HOH HOH . S 5 HOH B 26 2026 2026 HOH HOH . S 5 HOH B 27 2027 2027 HOH HOH . S 5 HOH B 28 2028 2028 HOH HOH . S 5 HOH B 29 2029 2029 HOH HOH . S 5 HOH B 30 2030 2030 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 3 _atom_site.Cartn_x 50.49 _atom_site.Cartn_y 64.695 _atom_site.Cartn_z 9.581 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 67.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1496 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 630 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #