data_4B09 # _model_server_result.job_id m_DLha0rlgXLhwmLzfQk_Q _model_server_result.datetime_utc '2024-11-05 04:41:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4b09 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1241}' # _entry.id 4B09 # _exptl.entry_id 4B09 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 2044.535 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXATANTALUM DODECABROMIDE' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.4 _cell.angle_gamma 90 _cell.entry_id 4B09 _cell.length_a 236.602 _cell.length_b 130.401 _cell.length_c 198.213 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B09 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,M,N 1 1 C,D,O,P 2 1 E,F,Q,R 3 1 G,H,S 4 1 I,J,T 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N CAS 73 A CAS 73 1_555 A C LEU 72 A LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CAS 73 A CAS 73 1_555 A N ARG 74 A ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A N CAS 109 A CAS 109 1_555 A C ILE 108 A ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C CAS 109 A CAS 109 1_555 A N LYS 110 A LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B N CAS 73 B CAS 73 1_555 B C LEU 72 B LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 B C CAS 73 B CAS 73 1_555 B N ARG 74 B ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 B N CAS 109 B CAS 109 1_555 B C ILE 108 B ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C CAS 109 B CAS 109 1_555 B N LYS 110 B LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 C N CAS 73 C CAS 73 1_555 C C LEU 72 C LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 C C CAS 73 C CAS 73 1_555 C N ARG 74 C ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 C N CAS 109 C CAS 109 1_555 C C ILE 108 C ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 C C CAS 109 C CAS 109 1_555 C N LYS 110 C LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 D N CAS 73 D CAS 73 1_555 D C LEU 72 D LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale14 D C CAS 73 D CAS 73 1_555 D N ARG 74 D ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale15 D N CAS 109 D CAS 109 1_555 D C ILE 108 D ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 D C CAS 109 D CAS 109 1_555 D N LYS 110 D LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 E N CAS 73 E CAS 73 1_555 E C LEU 72 E LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale18 E C CAS 73 E CAS 73 1_555 E N ARG 74 E ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale19 E N CAS 109 E CAS 109 1_555 E C ILE 108 E ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 E C CAS 109 E CAS 109 1_555 E N LYS 110 E LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 F N CAS 73 F CAS 73 1_555 F C LEU 72 F LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 F C CAS 73 F CAS 73 1_555 F N ARG 74 F ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale23 F N CAS 109 F CAS 109 1_555 F C ILE 108 F ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale24 F C CAS 109 F CAS 109 1_555 F N LYS 110 F LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 G C CAS 73 G CAS 73 1_555 G N ARG 74 G ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale26 G N CAS 73 G CAS 73 1_555 G C LEU 72 G LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale27 G C CAS 109 G CAS 109 1_555 G N LYS 110 G LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale28 G N CAS 109 G CAS 109 1_555 G C ILE 108 G ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale29 H C CAS 73 H CAS 73 1_555 H N ARG 74 H ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale30 H N CAS 73 H CAS 73 1_555 H C LEU 72 H LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale31 H C CAS 109 H CAS 109 1_555 H N LYS 110 H LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale32 H N CAS 109 H CAS 109 1_555 H C ILE 108 H ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale33 I C CAS 73 I CAS 73 1_555 I N ARG 74 I ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale34 I N CAS 73 I CAS 73 1_555 I C LEU 72 I LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale35 I C CAS 109 I CAS 109 1_555 I N LYS 110 I LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale36 I N CAS 109 I CAS 109 1_555 I C ILE 108 I ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale37 J C CAS 73 J CAS 73 1_555 J N ARG 74 J ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale38 J N CAS 73 J CAS 73 1_555 J C LEU 72 J LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale39 J C CAS 109 J CAS 109 1_555 J N LYS 110 J LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale40 J N CAS 109 J CAS 109 1_555 J C ILE 108 J ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale41 K C CAS 73 K CAS 73 1_555 K N ARG 74 K ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale42 K N CAS 73 K CAS 73 1_555 K C LEU 72 K LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale43 K C CAS 109 K CAS 109 1_555 K N LYS 110 K LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale44 K N CAS 109 K CAS 109 1_555 K C ILE 108 K ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale45 L C CAS 73 L CAS 73 1_555 L N ARG 74 L ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale46 L N CAS 73 L CAS 73 1_555 L C LEU 72 L LEU 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale47 L C CAS 109 L CAS 109 1_555 L N LYS 110 L LYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale48 L N CAS 109 L CAS 109 1_555 L C ILE 108 L ILE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'Br12 Ta6' _chem_comp.formula_weight 2044.535 _chem_comp.id TBR _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXATANTALUM DODECABROMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DODECABROMOHEXATANTALUM # _atom_sites.entry_id 4B09 _atom_sites.fract_transf_matrix[1][1] 0.004227 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00003 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 TBR A 1 1241 1241 TBR TBR . N 2 TBR B 1 1241 1241 TBR TBR . O 2 TBR C 1 1241 1241 TBR TBR . P 2 TBR D 1 1241 1241 TBR TBR . Q 2 TBR E 1 1241 1241 TBR TBR . R 2 TBR F 1 1241 1241 TBR TBR . S 2 TBR G 1 1241 1241 TBR TBR . T 2 TBR I 1 1241 1241 TBR TBR . U 2 TBR K 1 1241 1241 TBR TBR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 TA TA1 TBR . . . M 2 -4.209 -29.994 -114.937 1 181.77 ? TA1 TBR 1241 A 1 HETATM 2 TA TA2 TBR . . . M 2 -5.63 -32.535 -115.145 1 179.98 ? TA2 TBR 1241 A 1 HETATM 3 TA TA3 TBR . . . M 2 -2.712 -32.484 -115.235 1 177.16 ? TA3 TBR 1241 A 1 HETATM 4 TA TA4 TBR . . . M 2 -4.103 -33.548 -112.862 1 176.51 ? TA4 TBR 1241 A 1 HETATM 5 TA TA5 TBR . . . M 2 -2.659 -31.019 -112.687 1 183.86 ? TA5 TBR 1241 A 1 HETATM 6 TA TA6 TBR . . . M 2 -5.586 -31.05 -112.59 1 184.97 ? TA6 TBR 1241 A 1 HETATM 7 BR BR1 TBR . . . M 2 -6.026 -30.518 -116.742 1 148.1 ? BR1 TBR 1241 A 1 HETATM 8 BR BR2 TBR . . . M 2 -2.465 -30.415 -116.835 1 160.89 ? BR2 TBR 1241 A 1 HETATM 9 BR BR3 TBR . . . M 2 -2.387 -28.632 -113.689 1 164.18 ? BR3 TBR 1241 A 1 HETATM 10 BR BR4 TBR . . . M 2 -6.009 -28.676 -113.567 1 155.91 ? BR4 TBR 1241 A 1 HETATM 11 BR BR5 TBR . . . M 2 -4.238 -33.577 -117.065 1 138.89 ? BR5 TBR 1241 A 1 HETATM 12 BR BR6 TBR . . . M 2 -0.562 -31.693 -114.024 1 167.29 ? BR6 TBR 1241 A 1 HETATM 13 BR BR7 TBR . . . M 2 -2.179 -33.074 -111.161 1 183.18 ? BR7 TBR 1241 A 1 HETATM 14 BR BR8 TBR . . . M 2 -5.81 -33.091 -110.951 1 167.23 ? BR8 TBR 1241 A 1 HETATM 15 BR BR9 TBR . . . M 2 -5.98 -34.877 -114.065 1 168.03 ? BR9 TBR 1241 A 1 HETATM 16 BR BRA TBR . . . M 2 -2.777 -34.893 -114.657 1 184.31 ? BRA TBR 1241 A 1 HETATM 17 BR BRB TBR . . . M 2 -4.052 -29.959 -110.771 1 155.9 ? BRB TBR 1241 A 1 HETATM 18 BR BRC TBR . . . M 2 -7.738 -31.883 -113.8 1 158.23 ? BRC TBR 1241 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #