data_4B27 # _model_server_result.job_id -6HMwYEpc9n-B8VY24Tdlg _model_server_result.datetime_utc '2024-10-10 04:21:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4b27 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":81}' # _entry.id 4B27 # _exptl.entry_id 4B27 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4B27 _cell.length_a 109.467 _cell.length_b 110.151 _cell.length_c 46.229 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 276 n n N H TRP sing 277 n n N H2 TRP sing 278 n n CA C TRP sing 279 n n CA CB TRP sing 280 n n CA HA TRP sing 281 n n C O TRP doub 282 n n C OXT TRP sing 283 n n CB CG TRP sing 284 n n CB HB2 TRP sing 285 n n CB HB3 TRP sing 286 n n CG CD1 TRP doub 287 n y CG CD2 TRP sing 288 n y CD1 NE1 TRP sing 289 n y CD1 HD1 TRP sing 290 n n CD2 CE2 TRP doub 291 n y CD2 CE3 TRP sing 292 n y NE1 CE2 TRP sing 293 n y NE1 HE1 TRP sing 294 n n CE2 CZ2 TRP sing 295 n y CE3 CZ3 TRP doub 296 n y CE3 HE3 TRP sing 297 n n CZ2 CH2 TRP doub 298 n y CZ2 HZ2 TRP sing 299 n n CZ3 CH2 TRP sing 300 n y CZ3 HZ3 TRP sing 301 n n CH2 HH2 TRP sing 302 n n OXT HXT TRP sing 303 n n # _atom_sites.entry_id 4B27 _atom_sites.fract_transf_matrix[1][1] 0.009135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 TRP A 1 81 81 TRP TRP . H 2 TRP B 1 81 81 TRP TRP . I 2 TRP C 1 81 81 TRP TRP . J 2 TRP D 1 81 81 TRP TRP . K 2 TRP E 1 81 81 TRP TRP . L 2 TRP F 1 81 81 TRP TRP . M 3 HOH A 1 2001 2001 HOH HOH . M 3 HOH A 2 2002 2002 HOH HOH . M 3 HOH A 3 2003 2003 HOH HOH . M 3 HOH A 4 2004 2004 HOH HOH . M 3 HOH A 5 2005 2005 HOH HOH . N 3 HOH B 1 2001 2001 HOH HOH . N 3 HOH B 2 2002 2002 HOH HOH . N 3 HOH B 3 2003 2003 HOH HOH . O 3 HOH C 1 2001 2001 HOH HOH . O 3 HOH C 2 2002 2002 HOH HOH . O 3 HOH C 3 2003 2003 HOH HOH . P 3 HOH D 1 2001 2001 HOH HOH . P 3 HOH D 2 2002 2002 HOH HOH . P 3 HOH D 3 2003 2003 HOH HOH . P 3 HOH D 4 2004 2004 HOH HOH . P 3 HOH D 5 2005 2005 HOH HOH . P 3 HOH D 6 2006 2006 HOH HOH . Q 3 HOH E 1 2001 2001 HOH HOH . Q 3 HOH E 2 2002 2002 HOH HOH . Q 3 HOH E 3 2003 2003 HOH HOH . R 3 HOH F 1 2001 2001 HOH HOH . R 3 HOH F 2 2002 2002 HOH HOH . R 3 HOH F 3 2003 2003 HOH HOH . R 3 HOH F 4 2004 2004 HOH HOH . R 3 HOH F 5 2005 2005 HOH HOH . R 3 HOH F 6 2006 2006 HOH HOH . R 3 HOH F 7 2007 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . I 2 -0.888 28.664 28.558 1 91.04 ? N TRP 81 C 1 HETATM 2 C CA TRP . . . I 2 -1.699 28.069 27.506 1 85.65 ? CA TRP 81 C 1 HETATM 3 C C TRP . . . I 2 -1.916 26.611 27.783 1 84.66 ? C TRP 81 C 1 HETATM 4 O O TRP . . . I 2 -1.04 25.951 28.345 1 94.98 ? O TRP 81 C 1 HETATM 5 C CB TRP . . . I 2 -1.037 28.272 26.147 1 85.54 ? CB TRP 81 C 1 HETATM 6 C CG TRP . . . I 2 -1.752 27.617 24.993 1 90.08 ? CG TRP 81 C 1 HETATM 7 C CD1 TRP . . . I 2 -1.643 26.298 24.561 1 95.85 ? CD1 TRP 81 C 1 HETATM 8 C CD2 TRP . . . I 2 -2.706 28.237 24.065 1 98.19 ? CD2 TRP 81 C 1 HETATM 9 N NE1 TRP . . . I 2 -2.448 26.063 23.474 1 91.08 ? NE1 TRP 81 C 1 HETATM 10 C CE2 TRP . . . I 2 -3.097 27.186 23.112 1 95.11 ? CE2 TRP 81 C 1 HETATM 11 C CE3 TRP . . . I 2 -3.247 29.514 23.92 1 103.07 ? CE3 TRP 81 C 1 HETATM 12 C CZ2 TRP . . . I 2 -3.994 27.424 22.084 1 90.91 ? CZ2 TRP 81 C 1 HETATM 13 C CZ3 TRP . . . I 2 -4.145 29.741 22.87 1 88.9 ? CZ3 TRP 81 C 1 HETATM 14 C CH2 TRP . . . I 2 -4.505 28.721 21.977 1 90 ? CH2 TRP 81 C 1 HETATM 15 O OXT TRP . . . I 2 -2.965 26.044 27.448 1 80.27 ? OXT TRP 81 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #