data_4B2Q # _model_server_result.job_id ebH3UgEGcjt3sXgo-QxiJA _model_server_result.datetime_utc '2024-11-22 16:58:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4b2q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"LB","auth_seq_id":1477}' # _entry.id 4B2Q # _exptl.entry_id 4B2Q _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4B2Q _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B2Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 46-meric _pdbx_struct_assembly.oligomeric_count 46 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 14 VA N N ? 14 XA N N ? 14 ZA N N ? 14 BB N N ? 14 DB N N ? 14 FB N N ? 14 HB N N ? 14 JB N N ? 14 LB N N ? 14 NB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 153 A THR 178 1_555 VA MG MG . A MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc2 UA O2G ATP . A ATP 1511 1_555 VA MG MG . A MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc3 UA O2B ATP . A ATP 1511 1_555 VA MG MG . A MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc4 B OG1 THR 154 B THR 178 1_555 XA MG MG . B MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc5 WA O1G ATP . B ATP 1510 1_555 XA MG MG . B MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 WA O2G ATP . B ATP 1510 1_555 XA MG MG . B MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc7 WA O2B ATP . B ATP 1510 1_555 XA MG MG . B MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc8 WA PG ATP . B ATP 1510 1_555 XA MG MG . B MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc9 C OG1 THR 153 C THR 178 1_555 ZA MG MG . C MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc10 YA O2B ATP . C ATP 1511 1_555 ZA MG MG . C MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc11 YA O1G ATP . C ATP 1511 1_555 ZA MG MG . C MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc12 YA O2G ATP . C ATP 1511 1_555 ZA MG MG . C MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc13 D OG1 THR 159 D THR 164 1_555 BB MG MG . D MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc14 AB O2B ADP . D ADP 1476 1_555 BB MG MG . D MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc15 AB O2A ADP . D ADP 1476 1_555 BB MG MG . D MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc16 AB O1B ADP . D ADP 1476 1_555 BB MG MG . D MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.971 ? metalc ? metalc17 F OG1 THR 159 F THR 164 1_555 DB MG MG . F MG 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc18 F OE1 GLU 184 F GLU 189 1_555 DB MG MG . F MG 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.91 ? metalc ? metalc19 CB O2B ADP . F ADP 1479 1_555 DB MG MG . F MG 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc20 X OG1 THR 153 a THR 178 1_555 FB MG MG . a MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc21 EB O2G ATP . a ATP 1511 1_555 FB MG MG . a MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc22 EB O2B ATP . a ATP 1511 1_555 FB MG MG . a MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc23 Y OG1 THR 154 b THR 178 1_555 HB MG MG . b MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc24 GB O2B ATP . b ATP 1510 1_555 HB MG MG . b MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc25 GB O2G ATP . b ATP 1510 1_555 HB MG MG . b MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc26 GB O1G ATP . b ATP 1510 1_555 HB MG MG . b MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc27 GB PG ATP . b ATP 1510 1_555 HB MG MG . b MG 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc28 Z OG1 THR 153 c THR 178 1_555 JB MG MG . c MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc29 IB O1G ATP . c ATP 1511 1_555 JB MG MG . c MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc30 IB O2G ATP . c ATP 1511 1_555 JB MG MG . c MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc31 IB O2B ATP . c ATP 1511 1_555 JB MG MG . c MG 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc32 AA OG1 THR 159 d THR 164 1_555 LB MG MG . d MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc33 KB O2B ADP . d ADP 1476 1_555 LB MG MG . d MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc34 KB O2A ADP . d ADP 1476 1_555 LB MG MG . d MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? metalc ? metalc35 KB O1B ADP . d ADP 1476 1_555 LB MG MG . d MG 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc36 CA OG1 THR 159 f THR 164 1_555 NB MG MG . f MG 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc37 CA OE1 GLU 184 f GLU 189 1_555 NB MG MG . f MG 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.91 ? metalc ? metalc38 MB O2B ADP . f ADP 1479 1_555 NB MG MG . f MG 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4B2Q _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code UA 13 ATP A 1 1511 1511 ATP ATP . VA 14 MG A 1 1512 1512 MG MG . WA 13 ATP B 1 1510 1510 ATP ATP . XA 14 MG B 1 1511 1511 MG MG . YA 13 ATP C 1 1511 1511 ATP ATP . ZA 14 MG C 1 1512 1512 MG MG . AB 15 ADP D 1 1476 1476 ADP ADP . BB 14 MG D 1 1477 1477 MG MG . CB 15 ADP F 1 1479 1479 ADP ADP . DB 14 MG F 1 1480 1480 MG MG . EB 13 ATP a 1 1511 1511 ATP ATP . FB 14 MG a 1 1512 1512 MG MG . GB 13 ATP b 1 1510 1510 ATP ATP . HB 14 MG b 1 1511 1511 MG MG . IB 13 ATP c 1 1511 1511 ATP ATP . JB 14 MG c 1 1512 1512 MG MG . KB 15 ADP d 1 1476 1476 ADP ADP . LB 14 MG d 1 1477 1477 MG MG . MB 15 ADP f 1 1479 1479 ADP ADP . NB 14 MG f 1 1480 1480 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id LB _atom_site.label_entity_id 14 _atom_site.Cartn_x 385.764 _atom_site.Cartn_y 111.285 _atom_site.Cartn_z 229.674 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 71.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1477 _atom_site.auth_asym_id d _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 59 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #