data_4B8U # _model_server_result.job_id '_A3L_Hnp0_AL3jYfRzbTJg' _model_server_result.datetime_utc '2024-11-24 21:26:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4b8u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 4B8U # _exptl.entry_id 4B8U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 294.369 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-isobutyl-2-{[5-(thiophen-2-yl)-1,2-oxazol-3-yl]methoxy}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.51 _cell.angle_gamma 90 _cell.entry_id 4B8U _cell.length_a 113.9 _cell.length_b 143.67 _cell.length_c 78 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B8U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,H,I 1 1 C,D,G,J,K 2 1 E,L 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -34.815612 0 69.798805 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H18 N2 O3 S' _chem_comp.formula_weight 294.369 _chem_comp.id IBK _chem_comp.mon_nstd_flag . _chem_comp.name N-isobutyl-2-{[5-(thiophen-2-yl)-1,2-oxazol-3-yl]methoxy}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAT IBK sing 152 n n CAB CAT IBK sing 153 n n OAC CAP IBK doub 154 n n CAD CAE IBK doub 155 n y CAD CAF IBK sing 156 n y CAE SAO IBK sing 157 n y CAF CAS IBK doub 158 n y CAG CAQ IBK sing 159 n y CAG CAR IBK doub 160 n y CAH NAL IBK sing 161 n n CAH CAT IBK sing 162 n n CAI OAM IBK sing 163 n n CAI CAP IBK sing 164 n n CAJ OAM IBK sing 165 n n CAJ CAQ IBK sing 166 n n NAK OAN IBK sing 167 n y NAK CAQ IBK doub 168 n y NAL CAP IBK sing 169 n n OAN CAR IBK sing 170 n y SAO CAS IBK sing 171 n y CAR CAS IBK sing 172 n n CAA HAA IBK sing 173 n n CAA HAAA IBK sing 174 n n CAA HAAB IBK sing 175 n n CAB HAB IBK sing 176 n n CAB HABA IBK sing 177 n n CAB HABB IBK sing 178 n n CAD HAD IBK sing 179 n n CAE HAE IBK sing 180 n n CAF HAF IBK sing 181 n n CAG HAG IBK sing 182 n n CAH HAH IBK sing 183 n n CAH HAHA IBK sing 184 n n CAI HAI IBK sing 185 n n CAI HAIA IBK sing 186 n n CAJ HAJ IBK sing 187 n n CAJ HAJA IBK sing 188 n n NAL HNAL IBK sing 189 n n CAT HAT IBK sing 190 n n # _atom_sites.entry_id 4B8U _atom_sites.fract_transf_matrix[1][1] 0.00878 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004379 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00696 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 IBK B 1 501 501 IBK IBK . G 3 SO4 C 1 1167 1167 SO4 SO4 . H 4 HOH A 1 2001 2001 HOH HOH . H 4 HOH A 2 2002 2002 HOH HOH . H 4 HOH A 3 2003 2003 HOH HOH . H 4 HOH A 4 2004 2004 HOH HOH . H 4 HOH A 5 2005 2005 HOH HOH . I 4 HOH B 1 2001 2001 HOH HOH . I 4 HOH B 2 2002 2002 HOH HOH . I 4 HOH B 3 2003 2003 HOH HOH . I 4 HOH B 4 2004 2004 HOH HOH . J 4 HOH C 1 2001 2001 HOH HOH . J 4 HOH C 2 2002 2002 HOH HOH . J 4 HOH C 3 2003 2003 HOH HOH . J 4 HOH C 4 2004 2004 HOH HOH . J 4 HOH C 5 2005 2005 HOH HOH . J 4 HOH C 6 2006 2006 HOH HOH . J 4 HOH C 7 2007 2007 HOH HOH . J 4 HOH C 8 2008 2008 HOH HOH . K 4 HOH D 1 2001 2001 HOH HOH . L 4 HOH E 1 2001 2001 HOH HOH . L 4 HOH E 2 2002 2002 HOH HOH . L 4 HOH E 3 2003 2003 HOH HOH . L 4 HOH E 4 2004 2004 HOH HOH . L 4 HOH E 5 2005 2005 HOH HOH . L 4 HOH E 6 2006 2006 HOH HOH . L 4 HOH E 7 2007 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA IBK . . . F 2 -26.617 56.176 15.195 1 71.64 ? CAA IBK 501 B 1 HETATM 2 C CAB IBK . . . F 2 -24.846 54.881 13.927 1 73.47 ? CAB IBK 501 B 1 HETATM 3 O OAC IBK . . . F 2 -25.375 54.277 10.73 1 67.42 ? OAC IBK 501 B 1 HETATM 4 C CAD IBK . . . F 2 -35.462 53.855 9.773 1 69.44 ? CAD IBK 501 B 1 HETATM 5 C CAE IBK . . . F 2 -36.243 52.776 9.943 1 76.03 ? CAE IBK 501 B 1 HETATM 6 C CAF IBK . . . F 2 -34.149 53.616 9.631 1 64.34 ? CAF IBK 501 B 1 HETATM 7 C CAG IBK . . . F 2 -31.467 52.664 9.747 1 74.23 ? CAG IBK 501 B 1 HETATM 8 C CAH IBK . . . F 2 -27.01 55.615 12.806 1 74.53 ? CAH IBK 501 B 1 HETATM 9 C CAI IBK . . . F 2 -26.788 52.347 10.792 1 82.72 ? CAI IBK 501 B 1 HETATM 10 C CAJ IBK . . . F 2 -28.99 52.935 9.753 1 77.77 ? CAJ IBK 501 B 1 HETATM 11 N NAK IBK . . . F 2 -30.483 50.856 8.949 1 69.89 ? NAK IBK 501 B 1 HETATM 12 N NAL IBK . . . F 2 -27.07 54.214 12.316 1 70.88 ? NAL IBK 501 B 1 HETATM 13 O OAM IBK . . . F 2 -27.721 52.302 9.67 1 72.6 ? OAM IBK 501 B 1 HETATM 14 O OAN IBK . . . F 2 -32.06 50.665 8.973 1 73.06 ? OAN IBK 501 B 1 HETATM 15 S SAO IBK . . . F 2 -35.281 51.411 9.924 1 76.41 ? SAO IBK 501 B 1 HETATM 16 C CAP IBK . . . F 2 -26.403 53.77 11.21 1 77.02 ? CAP IBK 501 B 1 HETATM 17 C CAQ IBK . . . F 2 -30.295 52.084 9.454 1 77.17 ? CAQ IBK 501 B 1 HETATM 18 C CAR IBK . . . F 2 -32.52 51.871 9.541 1 73.3 ? CAR IBK 501 B 1 HETATM 19 C CAS IBK . . . F 2 -33.805 52.31 9.694 1 76 ? CAS IBK 501 B 1 HETATM 20 C CAT IBK . . . F 2 -25.932 55.947 13.832 1 76.5 ? CAT IBK 501 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #