data_4BB6
#
_model_server_result.job_id            CWkjvgJLOP5BEYhGgY1QMQ 
_model_server_result.datetime_utc      '2024-11-23 01:38:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bb6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1284}' 
#
_entry.id    4BB6 
#
_exptl.entry_id    4BB6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4BB6 
_cell.length_a            108.651 
_cell.length_b            108.651 
_cell.length_c            135.771 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BB6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 308 n n 
PA O2A NAP sing 309 n n 
PA O5B NAP sing 310 n n 
PA O3 NAP sing 311 n n 
O2A HOA2 NAP sing 312 n n 
O5B C5B NAP sing 313 n n 
C5B C4B NAP sing 314 n n 
C5B H51A NAP sing 315 n n 
C5B H52A NAP sing 316 n n 
C4B O4B NAP sing 317 n n 
C4B C3B NAP sing 318 n n 
C4B H4B NAP sing 319 n n 
O4B C1B NAP sing 320 n n 
C3B O3B NAP sing 321 n n 
C3B C2B NAP sing 322 n n 
C3B H3B NAP sing 323 n n 
O3B HO3A NAP sing 324 n n 
C2B O2B NAP sing 325 n n 
C2B C1B NAP sing 326 n n 
C2B H2B NAP sing 327 n n 
O2B P2B NAP sing 328 n n 
C1B N9A NAP sing 329 n n 
C1B H1B NAP sing 330 n n 
N9A C8A NAP sing 331 n y 
N9A C4A NAP sing 332 n y 
C8A N7A NAP doub 333 n y 
C8A H8A NAP sing 334 n n 
N7A C5A NAP sing 335 n y 
C5A C6A NAP sing 336 n y 
C5A C4A NAP doub 337 n y 
C6A N6A NAP sing 338 n n 
C6A N1A NAP doub 339 n y 
N6A H61A NAP sing 340 n n 
N6A H62A NAP sing 341 n n 
N1A C2A NAP sing 342 n y 
C2A N3A NAP doub 343 n y 
C2A H2A NAP sing 344 n n 
N3A C4A NAP sing 345 n y 
O3 PN NAP sing 346 n n 
PN O1N NAP doub 347 n n 
PN O2N NAP sing 348 n n 
PN O5D NAP sing 349 n n 
O5D C5D NAP sing 350 n n 
C5D C4D NAP sing 351 n n 
C5D H51N NAP sing 352 n n 
C5D H52N NAP sing 353 n n 
C4D O4D NAP sing 354 n n 
C4D C3D NAP sing 355 n n 
C4D H4D NAP sing 356 n n 
O4D C1D NAP sing 357 n n 
C3D O3D NAP sing 358 n n 
C3D C2D NAP sing 359 n n 
C3D H3D NAP sing 360 n n 
O3D HO3N NAP sing 361 n n 
C2D O2D NAP sing 362 n n 
C2D C1D NAP sing 363 n n 
C2D H2D NAP sing 364 n n 
O2D HO2N NAP sing 365 n n 
C1D N1N NAP sing 366 n n 
C1D H1D NAP sing 367 n n 
N1N C2N NAP sing 368 n y 
N1N C6N NAP doub 369 n y 
C2N C3N NAP doub 370 n y 
C2N H2N NAP sing 371 n n 
C3N C7N NAP sing 372 n n 
C3N C4N NAP sing 373 n y 
C7N O7N NAP doub 374 n n 
C7N N7N NAP sing 375 n n 
N7N H71N NAP sing 376 n n 
N7N H72N NAP sing 377 n n 
C4N C5N NAP doub 378 n y 
C4N H4N NAP sing 379 n n 
C5N C6N NAP sing 380 n y 
C5N H5N NAP sing 381 n n 
C6N H6N NAP sing 382 n n 
P2B O1X NAP doub 383 n n 
P2B O2X NAP sing 384 n n 
P2B O3X NAP sing 385 n n 
O2X HOP2 NAP sing 386 n n 
O3X HOP3 NAP sing 387 n n 
#
_atom_sites.entry_id                     4BB6 
_atom_sites.fract_transf_matrix[1][1]    0.009204 
_atom_sites.fract_transf_matrix[1][2]    0.005314 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010628 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007365 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 1292 1292 NAP NAP . 
D 3 HD1 A 1 1293 1293 HD1 HD1 . 
E 4 CL A 1 1294 1294 CL CL . 
F 2 NAP B 1 1284 1284 NAP NAP . 
G 3 HD1 B 1 1285 1285 HD1 HD1 . 
H 5 HOH A 1 2001 2001 HOH HOH . 
H 5 HOH A 2 2002 2002 HOH HOH . 
H 5 HOH A 3 2003 2003 HOH HOH . 
H 5 HOH A 4 2004 2004 HOH HOH . 
H 5 HOH A 5 2005 2005 HOH HOH . 
H 5 HOH A 6 2006 2006 HOH HOH . 
H 5 HOH A 7 2007 2007 HOH HOH . 
H 5 HOH A 8 2008 2008 HOH HOH . 
H 5 HOH A 9 2009 2009 HOH HOH . 
I 5 HOH B 1 2001 2001 HOH HOH . 
I 5 HOH B 2 2002 2002 HOH HOH . 
I 5 HOH B 3 2003 2003 HOH HOH . 
I 5 HOH B 4 2004 2004 HOH HOH . 
I 5 HOH B 5 2005 2005 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . F 2 -3.612 41.591 46.601 1 54.72 ? PA NAP 1284 B 1 
HETATM 2 O O1A NAP . . . F 2 -3.709 42.851 47.384 1 52.99 ? O1A NAP 1284 B 1 
HETATM 3 O O2A NAP . . . F 2 -4 40.373 47.346 1 56.79 ? O2A NAP 1284 B 1 
HETATM 4 O O5B NAP . . . F 2 -2.122 41.442 46.07 1 55.71 ? O5B NAP 1284 B 1 
HETATM 5 C C5B NAP . . . F 2 -1.567 42.554 45.413 1 55.82 ? C5B NAP 1284 B 1 
HETATM 6 C C4B NAP . . . F 2 -0.131 42.193 45.173 1 56.19 ? C4B NAP 1284 B 1 
HETATM 7 O O4B NAP . . . F 2 0.462 43.324 44.6 1 57.59 ? O4B NAP 1284 B 1 
HETATM 8 C C3B NAP . . . F 2 0.61 41.899 46.486 1 57.52 ? C3B NAP 1284 B 1 
HETATM 9 O O3B NAP . . . F 2 1.541 40.852 46.309 1 56.25 ? O3B NAP 1284 B 1 
HETATM 10 C C2B NAP . . . F 2 1.374 43.184 46.78 1 56.82 ? C2B NAP 1284 B 1 
HETATM 11 O O2B NAP . . . F 2 2.537 42.859 47.481 1 53.84 ? O2B NAP 1284 B 1 
HETATM 12 C C1B NAP . . . F 2 1.619 43.701 45.359 1 56.85 ? C1B NAP 1284 B 1 
HETATM 13 N N9A NAP . . . F 2 1.944 45.139 45.457 1 56.59 ? N9A NAP 1284 B 1 
HETATM 14 C C8A NAP . . . F 2 1.26 46.141 46.095 1 55.85 ? C8A NAP 1284 B 1 
HETATM 15 N N7A NAP . . . F 2 1.961 47.294 45.968 1 54.42 ? N7A NAP 1284 B 1 
HETATM 16 C C5A NAP . . . F 2 3.096 47.05 45.263 1 54.37 ? C5A NAP 1284 B 1 
HETATM 17 C C6A NAP . . . F 2 4.187 47.824 44.847 1 53.64 ? C6A NAP 1284 B 1 
HETATM 18 N N6A NAP . . . F 2 4.32 49.12 45.089 1 52.03 ? N6A NAP 1284 B 1 
HETATM 19 N N1A NAP . . . F 2 5.197 47.226 44.139 1 54.81 ? N1A NAP 1284 B 1 
HETATM 20 C C2A NAP . . . F 2 5.169 45.892 43.834 1 55.94 ? C2A NAP 1284 B 1 
HETATM 21 N N3A NAP . . . F 2 4.095 45.123 44.233 1 57.18 ? N3A NAP 1284 B 1 
HETATM 22 C C4A NAP . . . F 2 3.084 45.692 44.941 1 56.46 ? C4A NAP 1284 B 1 
HETATM 23 O O3 NAP . . . F 2 -4.457 41.692 45.242 1 55 ? O3 NAP 1284 B 1 
HETATM 24 P PN NAP . . . F 2 -5.441 40.622 44.554 1 54.81 ? PN NAP 1284 B 1 
HETATM 25 O O1N NAP . . . F 2 -6.768 40.69 45.149 1 55.3 ? O1N NAP 1284 B 1 
HETATM 26 O O2N NAP . . . F 2 -4.836 39.294 44.571 1 57.65 ? O2N NAP 1284 B 1 
HETATM 27 O O5D NAP . . . F 2 -5.413 41.186 43.065 1 53.57 ? O5D NAP 1284 B 1 
HETATM 28 C C5D NAP . . . F 2 -4.286 41.024 42.241 1 55.47 ? C5D NAP 1284 B 1 
HETATM 29 C C4D NAP . . . F 2 -4.735 41.326 40.817 1 56.72 ? C4D NAP 1284 B 1 
HETATM 30 O O4D NAP . . . F 2 -6.06 40.839 40.646 1 56.96 ? O4D NAP 1284 B 1 
HETATM 31 C C3D NAP . . . F 2 -4.75 42.825 40.554 1 57.22 ? C3D NAP 1284 B 1 
HETATM 32 O O3D NAP . . . F 2 -4.247 43.132 39.285 1 57.62 ? O3D NAP 1284 B 1 
HETATM 33 C C2D NAP . . . F 2 -6.208 43.167 40.604 1 57.49 ? C2D NAP 1284 B 1 
HETATM 34 O O2D NAP . . . F 2 -6.542 44.311 39.84 1 56.98 ? O2D NAP 1284 B 1 
HETATM 35 C C1D NAP . . . F 2 -6.834 41.875 40.097 1 57.81 ? C1D NAP 1284 B 1 
HETATM 36 N N1N NAP . . . F 2 -8.248 41.843 40.482 1 58.62 ? N1N NAP 1284 B 1 
HETATM 37 C C2N NAP . . . F 2 -8.637 41.446 41.724 1 59.68 ? C2N NAP 1284 B 1 
HETATM 38 C C3N NAP . . . F 2 -9.992 41.446 42.058 1 61.59 ? C3N NAP 1284 B 1 
HETATM 39 C C7N NAP . . . F 2 -10.447 40.981 43.405 1 61.09 ? C7N NAP 1284 B 1 
HETATM 40 O O7N NAP . . . F 2 -11.811 41.052 43.76 1 62.54 ? O7N NAP 1284 B 1 
HETATM 41 N N7N NAP . . . F 2 -9.544 40.499 44.248 1 62.21 ? N7N NAP 1284 B 1 
HETATM 42 C C4N NAP . . . F 2 -10.939 41.87 41.119 1 62.07 ? C4N NAP 1284 B 1 
HETATM 43 C C5N NAP . . . F 2 -10.501 42.284 39.864 1 61.2 ? C5N NAP 1284 B 1 
HETATM 44 C C6N NAP . . . F 2 -9.148 42.272 39.559 1 59.46 ? C6N NAP 1284 B 1 
HETATM 45 P P2B NAP . . . F 2 3.309 43.775 48.566 1 56 ? P2B NAP 1284 B 1 
HETATM 46 O O1X NAP . . . F 2 2.398 44.545 49.515 1 49.49 ? O1X NAP 1284 B 1 
HETATM 47 O O2X NAP . . . F 2 4.234 42.848 49.337 1 48.86 ? O2X NAP 1284 B 1 
HETATM 48 O O3X NAP . . . F 2 4.182 44.729 47.794 1 51.97 ? O3X NAP 1284 B 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           48 
#