data_4BCY # _model_server_result.job_id KC7pkBhjgesNAu8LrMc9Lg _model_server_result.datetime_utc '2024-11-05 01:29:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bcy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1157}' # _entry.id 4BCY # _exptl.entry_id 4BCY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BCY _cell.length_a 34.87 _cell.length_b 47.91 _cell.length_c 81.18 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BCY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 1 A ALA 1 1_555 E CD CD . A CD 1156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc2 A ND1 HIS 46 A HIS 46 1_555 B CU CU . A CU 1153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc3 A ND1 HIS 46 A HIS 46 1_555 C CU CU . A CU 1154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc4 A NE2 HIS 48 A HIS 48 1_555 B CU CU . A CU 1153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc5 A NE2 HIS 48 A HIS 48 1_555 C CU CU . A CU 1154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc6 A OE2 GLU 50 A GLU 50 1_455 G CD CD . A CD 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc7 A OE1 GLU 50 A GLU 50 1_455 G CD CD . A CD 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc8 A OE1 GLU 51 A GLU 51 4_445 E CD CD . A CD 1156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc9 A OD2 ASP 52 A ASP 52 1_455 G CD CD . A CD 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc10 A ND1 HIS 63 A HIS 63 1_555 D ZN ZN . A ZN 1155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc11 A ND1 HIS 71 A HIS 71 1_555 D ZN ZN . A ZN 1155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc12 A OE2 GLU 78 A GLU 78 1_555 F CD CD . A CD 1157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc13 A ND1 HIS 80 A HIS 80 1_555 D ZN ZN . A ZN 1155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc14 A OD1 ASP 83 A ASP 83 1_555 D ZN ZN . A ZN 1155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc15 A OD2 ASP 90 A ASP 90 1_555 G CD CD . A CD 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc16 A OD2 ASP 90 A ASP 90 1_555 H CD CD . A CD 1159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc17 A OD2 ASP 92 A ASP 92 1_555 G CD CD . A CD 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc18 A OD1 ASP 92 A ASP 92 1_555 G CD CD . A CD 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc19 A OD2 ASP 96 A ASP 96 4_545 E CD CD . A CD 1156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc20 A OD1 ASP 96 A ASP 96 4_545 E CD CD . A CD 1156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc21 A O ASP 109 A ASP 109 4_445 J CD CD . A CD 1161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc22 A NE2 HIS 110 A HIS 110 1_555 I CD CD . A CD 1160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc23 A NE2 HIS 120 A HIS 120 1_555 B CU CU . A CU 1153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc24 A NE2 HIS 120 A HIS 120 1_555 C CU CU . A CU 1154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc25 A OE2 GLU 121 A GLU 121 3_644 F CD CD . A CD 1157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.129 ? metalc ? metalc26 A OE1 GLU 121 A GLU 121 3_644 F CD CD . A CD 1157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc27 A O GLN 153 A GLN 153 4_545 I CD CD . A CD 1160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc28 A O GLN 153 A GLN 153 1_555 J CD CD . A CD 1161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc29 E CD CD . A CD 1156 1_555 M O HOH . A HOH 2069 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc30 H CD CD . A CD 1159 1_555 M O HOH . A HOH 2069 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc31 J CD CD . A CD 1161 1_555 M O HOH . A HOH 2070 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4BCY _atom_sites.fract_transf_matrix[1][1] 0.028678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012318 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 1153 1153 CU CU . C 2 CU A 1 1154 1154 CU CU . D 3 ZN A 1 1155 1155 ZN ZN . E 4 CD A 1 1156 1156 CD CD . F 4 CD A 1 1157 1157 CD CD . G 4 CD A 1 1158 1158 CD CD . H 4 CD A 1 1159 1159 CD CD . I 4 CD A 1 1160 1160 CD CD . J 4 CD A 1 1161 1161 CD CD . K 5 CL A 1 1162 1162 CL CL . L 5 CL A 1 1163 1163 CL CL . M 6 HOH A 1 2001 2001 HOH HOH . M 6 HOH A 2 2002 2002 HOH HOH . M 6 HOH A 3 2003 2003 HOH HOH . M 6 HOH A 4 2004 2004 HOH HOH . M 6 HOH A 5 2005 2005 HOH HOH . M 6 HOH A 6 2006 2006 HOH HOH . M 6 HOH A 7 2007 2007 HOH HOH . M 6 HOH A 8 2008 2008 HOH HOH . M 6 HOH A 9 2009 2009 HOH HOH . M 6 HOH A 10 2010 2010 HOH HOH . M 6 HOH A 11 2011 2011 HOH HOH . M 6 HOH A 12 2012 2012 HOH HOH . M 6 HOH A 13 2013 2013 HOH HOH . M 6 HOH A 14 2014 2014 HOH HOH . M 6 HOH A 15 2015 2015 HOH HOH . M 6 HOH A 16 2016 2016 HOH HOH . M 6 HOH A 17 2017 2017 HOH HOH . M 6 HOH A 18 2018 2018 HOH HOH . M 6 HOH A 19 2019 2019 HOH HOH . M 6 HOH A 20 2020 2020 HOH HOH . M 6 HOH A 21 2021 2021 HOH HOH . M 6 HOH A 22 2022 2022 HOH HOH . M 6 HOH A 23 2023 2023 HOH HOH . M 6 HOH A 24 2024 2024 HOH HOH . M 6 HOH A 25 2025 2025 HOH HOH . M 6 HOH A 26 2026 2026 HOH HOH . M 6 HOH A 27 2027 2027 HOH HOH . M 6 HOH A 28 2028 2028 HOH HOH . M 6 HOH A 29 2029 2029 HOH HOH . M 6 HOH A 30 2030 2030 HOH HOH . M 6 HOH A 31 2031 2031 HOH HOH . M 6 HOH A 32 2032 2032 HOH HOH . M 6 HOH A 33 2033 2033 HOH HOH . M 6 HOH A 34 2034 2034 HOH HOH . M 6 HOH A 35 2035 2035 HOH HOH . M 6 HOH A 36 2036 2036 HOH HOH . M 6 HOH A 37 2037 2037 HOH HOH . M 6 HOH A 38 2038 2038 HOH HOH . M 6 HOH A 39 2039 2039 HOH HOH . M 6 HOH A 40 2040 2040 HOH HOH . M 6 HOH A 41 2041 2041 HOH HOH . M 6 HOH A 42 2042 2042 HOH HOH . M 6 HOH A 43 2043 2043 HOH HOH . M 6 HOH A 44 2044 2044 HOH HOH . M 6 HOH A 45 2045 2045 HOH HOH . M 6 HOH A 46 2046 2046 HOH HOH . M 6 HOH A 47 2047 2047 HOH HOH . M 6 HOH A 48 2048 2048 HOH HOH . M 6 HOH A 49 2049 2049 HOH HOH . M 6 HOH A 50 2050 2050 HOH HOH . M 6 HOH A 51 2051 2051 HOH HOH . M 6 HOH A 52 2052 2052 HOH HOH . M 6 HOH A 53 2053 2053 HOH HOH . M 6 HOH A 54 2054 2054 HOH HOH . M 6 HOH A 55 2055 2055 HOH HOH . M 6 HOH A 56 2056 2056 HOH HOH . M 6 HOH A 57 2057 2057 HOH HOH . M 6 HOH A 58 2058 2058 HOH HOH . M 6 HOH A 59 2059 2059 HOH HOH . M 6 HOH A 60 2060 2060 HOH HOH . M 6 HOH A 61 2061 2061 HOH HOH . M 6 HOH A 62 2062 2062 HOH HOH . M 6 HOH A 63 2063 2063 HOH HOH . M 6 HOH A 64 2064 2064 HOH HOH . M 6 HOH A 65 2065 2065 HOH HOH . M 6 HOH A 66 2066 2066 HOH HOH . M 6 HOH A 67 2067 2067 HOH HOH . M 6 HOH A 68 2068 2068 HOH HOH . M 6 HOH A 69 2069 2069 HOH HOH . M 6 HOH A 70 2070 2070 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 23.29 _atom_site.Cartn_y -9.05 _atom_site.Cartn_z -26.195 _atom_site.occupancy 0.61 _atom_site.B_iso_or_equiv 72.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 1157 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #