data_4BD1 # _model_server_result.job_id vVoOFQHkxzvoVDlFbUapzA _model_server_result.datetime_utc '2024-11-24 14:09:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bd1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 4BD1 # _exptl.entry_id 4BD1 _exptl.method 'NEUTRON DIFFRACTION' # _entity.details ? _entity.formula_weight 178.016 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZO[B]THIOPHENE-2-BORONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BD1 _cell.length_a 73.429 _cell.length_b 73.429 _cell.length_c 99.112 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BD1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 43 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id B _struct_conn.ptnr2_label_comp_id BZB _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BZB _struct_conn.ptnr2_auth_seq_id 300 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.528 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H7 B O2 S' _chem_comp.formula_weight 178.016 _chem_comp.id BZB _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZO[B]THIOPHENE-2-BORONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B O1 BZB sing 70 n n B O2 BZB sing 71 n n B C1 BZB sing 72 n n O1 HO11 BZB sing 73 n n O2 HO21 BZB sing 74 n n C1 C2 BZB doub 75 n y C1 S BZB sing 76 n y C2 C3 BZB sing 77 n y C2 HC21 BZB sing 78 n n C8 C3 BZB doub 79 n y C8 C7 BZB sing 80 n y C8 S BZB sing 81 n y C3 C4 BZB sing 82 n y C7 C6 BZB doub 83 n y C7 HC71 BZB sing 84 n n C4 C5 BZB doub 85 n y C4 HC41 BZB sing 86 n n C6 C5 BZB sing 87 n y C6 HC61 BZB sing 88 n n C5 HC51 BZB sing 89 n n # _atom_sites.entry_id 4BD1 _atom_sites.fract_transf_matrix[1][1] 0.013619 _atom_sites.fract_transf_matrix[1][2] 0.007863 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015725 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01009 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BZB A 1 300 300 BZB BZB . C 3 DOD A 1 2000 2000 DOD DOD . C 3 DOD A 2 2001 2001 DOD DOD . C 3 DOD A 3 2002 2002 DOD DOD . C 3 DOD A 4 2003 2003 DOD DOD . C 3 DOD A 5 2004 2004 DOD DOD . C 3 DOD A 6 2005 2005 DOD DOD . C 3 DOD A 7 2006 2006 DOD DOD . C 3 DOD A 8 2007 2007 DOD DOD . C 3 DOD A 9 2008 2008 DOD DOD . C 3 DOD A 10 2009 2009 DOD DOD . C 3 DOD A 11 2010 2010 DOD DOD . C 3 DOD A 12 2011 2011 DOD DOD . C 3 DOD A 13 2012 2012 DOD DOD . C 3 DOD A 14 2013 2013 DOD DOD . C 3 DOD A 15 2014 2014 DOD DOD . C 3 DOD A 16 2015 2015 DOD DOD . C 3 DOD A 17 2016 2016 DOD DOD . C 3 DOD A 18 2017 2017 DOD DOD . C 3 DOD A 19 2018 2018 DOD DOD . C 3 DOD A 20 2019 2019 DOD DOD . C 3 DOD A 21 2020 2020 DOD DOD . C 3 DOD A 22 2021 2021 DOD DOD . C 3 DOD A 23 2022 2022 DOD DOD . C 3 DOD A 24 2023 2023 DOD DOD . C 3 DOD A 25 2024 2024 DOD DOD . C 3 DOD A 26 2025 2025 DOD DOD . C 3 DOD A 27 2026 2026 DOD DOD . C 3 DOD A 28 2027 2027 DOD DOD . C 3 DOD A 29 2028 2028 DOD DOD . C 3 DOD A 30 2029 2029 DOD DOD . C 3 DOD A 31 2030 2030 DOD DOD . C 3 DOD A 32 2031 2031 DOD DOD . C 3 DOD A 33 2032 2032 DOD DOD . C 3 DOD A 34 2033 2033 DOD DOD . C 3 DOD A 35 2034 2034 DOD DOD . C 3 DOD A 36 2035 2035 DOD DOD . C 3 DOD A 37 2036 2036 DOD DOD . C 3 DOD A 38 2037 2037 DOD DOD . C 3 DOD A 39 2038 2038 DOD DOD . C 3 DOD A 40 2039 2039 DOD DOD . C 3 DOD A 41 2040 2040 DOD DOD . C 3 DOD A 42 2042 2042 DOD DOD . C 3 DOD A 43 2043 2043 DOD DOD . C 3 DOD A 44 2045 2045 DOD DOD . C 3 DOD A 45 2046 2046 DOD DOD . C 3 DOD A 46 2047 2047 DOD DOD . C 3 DOD A 47 2048 2048 DOD DOD . C 3 DOD A 48 2049 2049 DOD DOD . C 3 DOD A 49 2050 2050 DOD DOD . C 3 DOD A 50 2052 2052 DOD DOD . C 3 DOD A 51 2053 2053 DOD DOD . C 3 DOD A 52 2054 2054 DOD DOD . C 3 DOD A 53 2055 2055 DOD DOD . C 3 DOD A 54 2056 2056 DOD DOD . C 3 DOD A 55 2057 2057 DOD DOD . C 3 DOD A 56 2058 2058 DOD DOD . C 3 DOD A 57 2059 2059 DOD DOD . C 3 DOD A 58 2060 2060 DOD DOD . C 3 DOD A 59 2061 2061 DOD DOD . C 3 DOD A 60 2062 2062 DOD DOD . C 3 DOD A 61 2063 2063 DOD DOD . C 3 DOD A 62 2064 2064 DOD DOD . C 3 DOD A 63 2065 2065 DOD DOD . C 3 DOD A 64 2066 2066 DOD DOD . C 3 DOD A 65 2067 2067 DOD DOD . C 3 DOD A 66 2068 2068 DOD DOD . C 3 DOD A 67 2069 2069 DOD DOD . C 3 DOD A 68 2070 2070 DOD DOD . C 3 DOD A 69 2071 2071 DOD DOD . C 3 DOD A 70 2072 2072 DOD DOD . C 3 DOD A 71 2073 2073 DOD DOD . C 3 DOD A 72 2074 2074 DOD DOD . C 3 DOD A 73 2075 2075 DOD DOD . C 3 DOD A 74 2076 2076 DOD DOD . C 3 DOD A 75 2077 2077 DOD DOD . C 3 DOD A 76 2078 2078 DOD DOD . C 3 DOD A 77 2079 2079 DOD DOD . C 3 DOD A 78 2080 2080 DOD DOD . C 3 DOD A 79 2081 2081 DOD DOD . C 3 DOD A 80 2083 2083 DOD DOD . C 3 DOD A 81 2084 2084 DOD DOD . C 3 DOD A 82 2085 2085 DOD DOD . C 3 DOD A 83 2086 2086 DOD DOD . C 3 DOD A 84 2088 2088 DOD DOD . C 3 DOD A 85 2090 2090 DOD DOD . C 3 DOD A 86 2091 2091 DOD DOD . C 3 DOD A 87 2092 2092 DOD DOD . C 3 DOD A 88 2093 2093 DOD DOD . C 3 DOD A 89 2094 2094 DOD DOD . C 3 DOD A 90 2095 2095 DOD DOD . C 3 DOD A 91 2096 2096 DOD DOD . C 3 DOD A 92 2097 2097 DOD DOD . C 3 DOD A 93 2098 2098 DOD DOD . C 3 DOD A 94 2099 2099 DOD DOD . C 3 DOD A 95 2100 2100 DOD DOD . C 3 DOD A 96 2101 2101 DOD DOD . C 3 DOD A 97 2102 2102 DOD DOD . C 3 DOD A 98 2103 2103 DOD DOD . C 3 DOD A 99 2104 2104 DOD DOD . C 3 DOD A 100 2105 2105 DOD DOD . C 3 DOD A 101 2106 2106 DOD DOD . C 3 DOD A 102 2107 2107 DOD DOD . C 3 DOD A 103 2108 2108 DOD DOD . C 3 DOD A 104 2109 2109 DOD DOD . C 3 DOD A 105 2110 2110 DOD DOD . C 3 DOD A 106 2111 2111 DOD DOD . C 3 DOD A 107 2112 2112 DOD DOD . C 3 DOD A 108 2113 2113 DOD DOD . C 3 DOD A 109 2114 2114 DOD DOD . C 3 DOD A 110 2116 2116 DOD DOD . C 3 DOD A 111 2117 2117 DOD DOD . C 3 DOD A 112 2120 2120 DOD DOD . C 3 DOD A 113 2122 2122 DOD DOD . C 3 DOD A 114 2123 2123 DOD DOD . C 3 DOD A 115 2124 2124 DOD DOD . C 3 DOD A 116 2125 2125 DOD DOD . C 3 DOD A 117 2126 2126 DOD DOD . C 3 DOD A 118 2127 2127 DOD DOD . C 3 DOD A 119 2128 2128 DOD DOD . C 3 DOD A 120 2129 2129 DOD DOD . C 3 DOD A 121 2130 2130 DOD DOD . C 3 DOD A 122 2131 2131 DOD DOD . C 3 DOD A 123 2132 2132 DOD DOD . C 3 DOD A 124 2133 2133 DOD DOD . C 3 DOD A 125 2134 2134 DOD DOD . C 3 DOD A 126 2135 2135 DOD DOD . C 3 DOD A 127 2136 2136 DOD DOD . C 3 DOD A 128 2138 2138 DOD DOD . C 3 DOD A 129 2139 2139 DOD DOD . C 3 DOD A 130 2140 2140 DOD DOD . C 3 DOD A 131 2141 2141 DOD DOD . C 3 DOD A 132 2142 2142 DOD DOD . C 3 DOD A 133 2143 2143 DOD DOD . C 3 DOD A 134 2144 2144 DOD DOD . C 3 DOD A 135 2145 2145 DOD DOD . C 3 DOD A 136 2146 2146 DOD DOD . C 3 DOD A 137 2147 2147 DOD DOD . C 3 DOD A 138 2148 2148 DOD DOD . C 3 DOD A 139 2150 2150 DOD DOD . C 3 DOD A 140 2152 2152 DOD DOD . C 3 DOD A 141 2153 2153 DOD DOD . C 3 DOD A 142 2156 2156 DOD DOD . C 3 DOD A 143 2157 2157 DOD DOD . C 3 DOD A 144 2158 2158 DOD DOD . C 3 DOD A 145 2159 2159 DOD DOD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B BZB . . . B 2 -39.659 17.24 9.585 0.48 38.2 ? B BZB 300 A 1 HETATM 2 O O1 BZB . . . B 2 -38.577 17.733 10.4 0.48 36.11 ? O1 BZB 300 A 1 HETATM 3 O O2 BZB . . . B 2 -39.275 15.958 9.046 0.48 37.94 ? O2 BZB 300 A 1 HETATM 4 C C1 BZB . . . B 2 -40.954 17.032 10.412 0.48 45.07 ? C1 BZB 300 A 1 HETATM 5 C C2 BZB . . . B 2 -41.951 16.124 10.212 0.48 45 ? C2 BZB 300 A 1 HETATM 6 C C8 BZB . . . B 2 -42.981 17.025 12.096 0.48 48.3 ? C8 BZB 300 A 1 HETATM 7 C C3 BZB . . . B 2 -43.01 16.087 11.056 0.48 44.3 ? C3 BZB 300 A 1 HETATM 8 C C7 BZB . . . B 2 -43.997 17.115 13.043 0.48 49.2 ? C7 BZB 300 A 1 HETATM 9 S S BZB . . . B 2 -41.484 17.886 11.825 0.48 54.9 ? S BZB 300 A 1 HETATM 10 C C4 BZB . . . B 2 -44.121 15.235 11.015 0.48 49.44 ? C4 BZB 300 A 1 HETATM 11 C C6 BZB . . . B 2 -45.069 16.26 12.968 0.48 48.34 ? C6 BZB 300 A 1 HETATM 12 C C5 BZB . . . B 2 -45.121 15.336 11.963 0.48 45.87 ? C5 BZB 300 A 1 HETATM 13 D DC21 BZB . . . B 2 -41.902 15.504 9.469 0.48 44.18 ? DC21 BZB 300 A 1 HETATM 14 D DC71 BZB . . . B 2 -43.947 17.775 13.752 0.48 49.8 ? DC71 BZB 300 A 1 HETATM 15 D DC41 BZB . . . B 2 -44.189 14.568 10.314 0.48 47.9 ? DC41 BZB 300 A 1 HETATM 16 D DC61 BZB . . . B 2 -45.783 16.313 13.622 0.48 50.22 ? DC61 BZB 300 A 1 HETATM 17 D DC51 BZB . . . B 2 -45.881 14.734 11.912 0.48 47.94 ? DC51 BZB 300 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #