data_4BD7
#
_model_server_result.job_id            Xh4y-n-QT02QCtwGuW11dQ 
_model_server_result.datetime_utc      '2024-11-25 07:30:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bd7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1171}' 
#
_entry.id    4BD7 
#
_exptl.entry_id    4BD7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              140.908 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PRASEODYMIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4BD7 
_cell.length_a            142.237 
_cell.length_b            142.237 
_cell.length_c            86.775 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BD7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I 1 1 
C,D,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 142 A ASP 142 1_555 E PR PR . A PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? 
metalc ? metalc2 A OD2 ASP 142 A ASP 142 1_555 E PR PR . A PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.364 ? 
metalc ? metalc3 A OE1 GLU 146 A GLU 146 1_555 E PR PR . A PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? 
metalc ? metalc4 A OE2 GLU 146 A GLU 146 1_555 E PR PR . A PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.266 ? 
metalc ? metalc5 E PR PR . A PR 1171 1_555 H O HOH . A HOH 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.238 ? 
metalc ? metalc6 E PR PR . A PR 1171 1_555 B OE1 GLU 69 B GLU 69 6_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? 
metalc ? metalc7 E PR PR . A PR 1171 1_555 B OE2 GLU 69 B GLU 69 6_565 ? ? ? ? ? ? ? ? ? ? ? ? 3.259 ? 
metalc ? metalc8 B OD1 ASP 142 B ASP 142 1_555 G PR PR . B PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.457 ? 
metalc ? metalc9 B OE1 GLU 146 B GLU 146 1_555 G PR PR . B PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? 
metalc ? metalc10 B OE2 GLU 146 B GLU 146 1_555 G PR PR . B PR 1171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.108 ? 
metalc ? metalc11 G PR PR . B PR 1171 1_555 C OE2 GLU 146 C GLU 146 3_675 ? ? ? ? ? ? ? ? ? ? ? ? 3.018 ? 
#
_chem_comp.formula           'Pr 3' 
_chem_comp.formula_weight    140.908 
_chem_comp.id                PR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PRASEODYMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4BD7 
_atom_sites.fract_transf_matrix[1][1]    0.007031 
_atom_sites.fract_transf_matrix[1][2]    0.004059 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008118 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011524 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PR A 1 1171 1171 PR PR . 
F 3 CL A 1 1172 1172 CL CL . 
G 2 PR B 1 1171 1171 PR PR . 
H 4 HOH A 1 2001 2001 HOH HOH . 
H 4 HOH A 2 2002 2002 HOH HOH . 
H 4 HOH A 3 2003 2003 HOH HOH . 
H 4 HOH A 4 2004 2004 HOH HOH . 
H 4 HOH A 5 2005 2005 HOH HOH . 
H 4 HOH A 6 2006 2006 HOH HOH . 
H 4 HOH A 7 2007 2007 HOH HOH . 
H 4 HOH A 8 2008 2008 HOH HOH . 
H 4 HOH A 9 2009 2009 HOH HOH . 
H 4 HOH A 10 2010 2010 HOH HOH . 
H 4 HOH A 11 2011 2011 HOH HOH . 
I 4 HOH B 1 2001 2001 HOH HOH . 
I 4 HOH B 2 2002 2002 HOH HOH . 
I 4 HOH B 3 2003 2003 HOH HOH . 
J 4 HOH D 1 2001 2001 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           PR 
_atom_site.label_atom_id         PR 
_atom_site.label_comp_id         PR 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               36.663 
_atom_site.Cartn_y               123.093 
_atom_site.Cartn_z               66.64 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        102.55 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          PR 
_atom_site.auth_comp_id          PR 
_atom_site.auth_seq_id           1171 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#