data_4BDK # _model_server_result.job_id NpRw5sOtLA5-XkMBA-H0dg _model_server_result.datetime_utc '2024-11-17 15:44:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bdk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1514}' # _entry.id 4BDK # _exptl.entry_id 4BDK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 293.32 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(4-methoxyphenyl)methyl]quinoxaline-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BDK _cell.length_a 91.01 _cell.length_b 91.01 _cell.length_c 92.84 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BDK _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 61.893333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H15 N3 O2' _chem_comp.formula_weight 293.32 _chem_comp.id RQQ _chem_comp.mon_nstd_flag . _chem_comp.name N-[(4-methoxyphenyl)methyl]quinoxaline-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C6 RQQ doub 289 n n C6 C4 RQQ sing 290 n n C6 N RQQ sing 291 n n C4 C3 RQQ sing 292 n y C4 C5 RQQ doub 293 n y C3 C2 RQQ doub 294 n y C2 C1 RQQ sing 295 n y C5 C RQQ sing 296 n y C N2 RQQ doub 297 n y C C1 RQQ sing 298 n y N2 C16 RQQ sing 299 n y C16 C15 RQQ doub 300 n y C15 N1 RQQ sing 301 n y N1 C1 RQQ doub 302 n y N C7 RQQ sing 303 n n C7 C8 RQQ sing 304 n n C8 C14 RQQ sing 305 n y C8 C9 RQQ doub 306 n y C14 C13 RQQ doub 307 n y C13 C11 RQQ sing 308 n y C11 O RQQ sing 309 n n C11 C10 RQQ doub 310 n y O C12 RQQ sing 311 n n C10 C9 RQQ sing 312 n y N H RQQ sing 313 n n C3 H3 RQQ sing 314 n n C5 H5 RQQ sing 315 n n C2 H2 RQQ sing 316 n n C16 H16 RQQ sing 317 n n C15 H15 RQQ sing 318 n n C7 H71C RQQ sing 319 n n C7 H72C RQQ sing 320 n n C14 H14 RQQ sing 321 n n C9 H9 RQQ sing 322 n n C13 H13 RQQ sing 323 n n C10 H10 RQQ sing 324 n n C12 H121 RQQ sing 325 n n C12 H122 RQQ sing 326 n n C12 H123 RQQ sing 327 n n # _atom_sites.entry_id 4BDK _atom_sites.fract_transf_matrix[1][1] 0.010988 _atom_sites.fract_transf_matrix[1][2] 0.006344 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012688 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RQQ A 1 1514 1514 RQQ RQQ . C 3 NO3 A 1 1515 1515 NO3 NO3 . D 4 EDO A 1 1516 1516 EDO EDO . E 4 EDO A 1 1517 1517 EDO EDO . F 4 EDO A 1 1518 1518 EDO EDO . G 5 HOH A 1 2001 2001 HOH HOH . G 5 HOH A 2 2002 2002 HOH HOH . G 5 HOH A 3 2003 2003 HOH HOH . G 5 HOH A 4 2004 2004 HOH HOH . G 5 HOH A 5 2005 2005 HOH HOH . G 5 HOH A 6 2006 2006 HOH HOH . G 5 HOH A 7 2007 2007 HOH HOH . G 5 HOH A 8 2008 2008 HOH HOH . G 5 HOH A 9 2009 2009 HOH HOH . G 5 HOH A 10 2010 2010 HOH HOH . G 5 HOH A 11 2011 2011 HOH HOH . G 5 HOH A 12 2012 2012 HOH HOH . G 5 HOH A 13 2013 2013 HOH HOH . G 5 HOH A 14 2014 2014 HOH HOH . G 5 HOH A 15 2015 2015 HOH HOH . G 5 HOH A 16 2016 2016 HOH HOH . G 5 HOH A 17 2017 2017 HOH HOH . G 5 HOH A 18 2018 2018 HOH HOH . G 5 HOH A 19 2019 2019 HOH HOH . G 5 HOH A 20 2020 2020 HOH HOH . G 5 HOH A 21 2021 2021 HOH HOH . G 5 HOH A 22 2022 2022 HOH HOH . G 5 HOH A 23 2023 2023 HOH HOH . G 5 HOH A 24 2024 2024 HOH HOH . G 5 HOH A 25 2025 2025 HOH HOH . G 5 HOH A 26 2026 2026 HOH HOH . G 5 HOH A 27 2027 2027 HOH HOH . G 5 HOH A 28 2028 2028 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 RQQ . . . B 2 40.5 -30.536 4.788 1 79.16 ? O1 RQQ 1514 A 1 HETATM 2 C C6 RQQ . . . B 2 39.81 -31.511 4.488 1 78.75 ? C6 RQQ 1514 A 1 HETATM 3 C C4 RQQ . . . B 2 39.111 -32.315 5.545 1 75.24 ? C4 RQQ 1514 A 1 HETATM 4 C C3 RQQ . . . B 2 39.31 -31.981 6.889 1 74.12 ? C3 RQQ 1514 A 1 HETATM 5 C C2 RQQ . . . B 2 38.654 -32.647 7.883 1 72.56 ? C2 RQQ 1514 A 1 HETATM 6 C C5 RQQ . . . B 2 38.258 -33.347 5.213 1 72.78 ? C5 RQQ 1514 A 1 HETATM 7 C C RQQ . . . B 2 37.564 -34.047 6.226 1 70.86 ? C RQQ 1514 A 1 HETATM 8 N N2 RQQ . . . B 2 36.684 -35.038 5.876 1 68.69 ? N2 RQQ 1514 A 1 HETATM 9 C C16 RQQ . . . B 2 36.043 -35.63 6.87 1 68.03 ? C16 RQQ 1514 A 1 HETATM 10 C C15 RQQ . . . B 2 36.233 -35.277 8.202 1 68.45 ? C15 RQQ 1514 A 1 HETATM 11 N N1 RQQ . . . B 2 37.072 -34.326 8.577 1 69.41 ? N1 RQQ 1514 A 1 HETATM 12 C C1 RQQ . . . B 2 37.759 -33.693 7.576 1 70.89 ? C1 RQQ 1514 A 1 HETATM 13 N N RQQ . . . B 2 39.649 -31.912 3.22 1 80.37 ? N RQQ 1514 A 1 HETATM 14 C C7 RQQ . . . B 2 40.412 -31.358 2.109 1 80.09 ? C7 RQQ 1514 A 1 HETATM 15 C C8 RQQ . . . B 2 41.386 -32.338 1.502 1 79.76 ? C8 RQQ 1514 A 1 HETATM 16 C C14 RQQ . . . B 2 41.455 -32.512 0.127 1 81.19 ? C14 RQQ 1514 A 1 HETATM 17 C C13 RQQ . . . B 2 42.309 -33.444 -0.438 1 82.91 ? C13 RQQ 1514 A 1 HETATM 18 C C11 RQQ . . . B 2 43.12 -34.221 0.383 1 83.86 ? C11 RQQ 1514 A 1 HETATM 19 O O RQQ . . . B 2 43.98 -35.227 0.007 1 84.76 ? O RQQ 1514 A 1 HETATM 20 C C12 RQQ . . . B 2 44.107 -35.531 -1.385 1 84.71 ? C12 RQQ 1514 A 1 HETATM 21 C C10 RQQ . . . B 2 43.084 -34.037 1.757 1 82.03 ? C10 RQQ 1514 A 1 HETATM 22 C C9 RQQ . . . B 2 42.22 -33.104 2.304 1 79.95 ? C9 RQQ 1514 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #