data_4BEP # _model_server_result.job_id deNZAuJMCHW3lY3Z5zSwWQ _model_server_result.datetime_utc '2024-12-01 18:19:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1486}' # _entry.id 4BEP # _exptl.entry_id 4BEP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BEP _cell.length_a 55.268 _cell.length_b 91.633 _cell.length_c 239.151 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BEP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 33 A MSE 5 1_555 A N PRO 34 A PRO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale2 A C ASP 198 A ASP 170 1_555 A N MSE 199 A MSE 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale3 A C MSE 199 A MSE 171 1_555 A N CYS 200 A CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C VAL 214 A VAL 186 1_555 A N MSE 215 A MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale5 A C MSE 215 A MSE 187 1_555 A N LYS 216 A LYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C ARG 251 A ARG 223 1_555 A N MSE 252 A MSE 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale7 A C MSE 252 A MSE 224 1_555 A N TYR 253 A TYR 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale8 A C LEU 276 A LEU 248 1_555 A N MSE 277 A MSE 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale9 A C MSE 277 A MSE 249 1_555 A N GLN 278 A GLN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 A C ASP 341 A ASP 313 1_555 A N MSE 342 A MSE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 A C MSE 342 A MSE 314 1_555 A N LEU 343 A LEU 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C HIS 353 A HIS 325 1_555 A N MSE 354 A MSE 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 A C MSE 354 A MSE 326 1_555 A N ASP 355 A ASP 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 A C ASN 432 A ASN 404 1_555 A N MSE 433 A MSE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale15 A C MSE 433 A MSE 405 1_555 A N ALA 434 A ALA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 A C ALA 434 A ALA 406 1_555 A N MSE 435 A MSE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale17 A C MSE 435 A MSE 407 1_555 A N LEU 436 A LEU 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale18 A C ASN 465 A ASN 437 1_555 A N MSE 466 A MSE 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale19 A C MSE 466 A MSE 438 1_555 A N GLN 467 A GLN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 A C ILE 468 A ILE 440 1_555 A N MSE 469 A MSE 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 A C MSE 469 A MSE 441 1_555 A N GLY 470 A GLY 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 B C MSE 33 B MSE 5 1_555 B N PRO 34 B PRO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale23 B C ASP 198 B ASP 170 1_555 B N MSE 199 B MSE 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale24 B C MSE 199 B MSE 171 1_555 B N CYS 200 B CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale25 B C VAL 214 B VAL 186 1_555 B N MSE 215 B MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale26 B C MSE 215 B MSE 187 1_555 B N LYS 216 B LYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale27 B C ARG 251 B ARG 223 1_555 B N MSE 252 B MSE 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale28 B C MSE 252 B MSE 224 1_555 B N TYR 253 B TYR 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale29 B C LEU 276 B LEU 248 1_555 B N MSE 277 B MSE 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale30 B C MSE 277 B MSE 249 1_555 B N GLN 278 B GLN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale31 B C ASP 341 B ASP 313 1_555 B N MSE 342 B MSE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale32 B C MSE 342 B MSE 314 1_555 B N LEU 343 B LEU 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale33 B C HIS 353 B HIS 325 1_555 B N MSE 354 B MSE 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale34 B C MSE 354 B MSE 326 1_555 B N ASP 355 B ASP 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale35 B C ASN 432 B ASN 404 1_555 B N MSE 433 B MSE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale36 B C MSE 433 B MSE 405 1_555 B N ALA 434 B ALA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale37 B C ALA 434 B ALA 406 1_555 B N MSE 435 B MSE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale38 B C MSE 435 B MSE 407 1_555 B N LEU 436 B LEU 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale39 B C ASN 465 B ASN 437 1_555 B N MSE 466 B MSE 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale40 B C MSE 466 B MSE 438 1_555 B N GLN 467 B GLN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale41 B C ILE 468 B ILE 440 1_555 B N MSE 469 B MSE 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale42 B C MSE 469 B MSE 441 1_555 B N GLY 470 B GLY 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4BEP _atom_sites.fract_transf_matrix[1][1] 0.018094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1483 1483 SO4 SO4 . D 2 SO4 A 1 1484 1484 SO4 SO4 . E 2 SO4 A 1 1485 1485 SO4 SO4 . F 3 MG A 1 1486 1486 MG MG . G 4 HOH A 1 2001 2001 HOH HOH . G 4 HOH A 2 2002 2002 HOH HOH . G 4 HOH A 3 2003 2003 HOH HOH . G 4 HOH A 4 2004 2004 HOH HOH . G 4 HOH A 5 2005 2005 HOH HOH . H 4 HOH B 1 2001 2001 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.888 _atom_site.Cartn_y -18.858 _atom_site.Cartn_z -7.854 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1486 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #