data_4BEY # _model_server_result.job_id 0nijXsAINm0Fy2cRWw1Ybg _model_server_result.datetime_utc '2024-11-23 02:26:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bey # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1329}' # _entry.id 4BEY # _exptl.entry_id 4BEY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BEY _cell.length_a 242.44 _cell.length_b 242.44 _cell.length_c 110.36 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BEY _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 3 4 3 MAN BMA C1 O1 . O3 HO3 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 C 1 NAG A 1330 NAG 3 n C NAG 2 C 2 NAG A 1331 NAG 3 n C BMA 3 C 3 BMA A 1332 BMA 3 n C MAN 4 C 4 MAN A 1333 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 2 1_555 A SG CYS 283 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf2 A SG CYS 111 A CYS 110 1_555 A SG CYS 188 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A ND2 ASN 16 A ASN 15 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 A SG CYS 324 A CYS 323 1_555 F C1 PLM . A PLM 1329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.676 ? covale ? covale4 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale5 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale6 C O3 BMA . C BMA 3 1_555 C C1 MAN . C MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 398 n n C1 O2 PLM doub 399 n n C1 C2 PLM sing 400 n n O1 H PLM sing 401 n n C2 C3 PLM sing 402 n n C2 H21 PLM sing 403 n n C2 H22 PLM sing 404 n n C3 C4 PLM sing 405 n n C3 H31 PLM sing 406 n n C3 H32 PLM sing 407 n n C4 C5 PLM sing 408 n n C4 H41 PLM sing 409 n n C4 H42 PLM sing 410 n n C5 C6 PLM sing 411 n n C5 H51 PLM sing 412 n n C5 H52 PLM sing 413 n n C6 C7 PLM sing 414 n n C6 H61 PLM sing 415 n n C6 H62 PLM sing 416 n n C7 C8 PLM sing 417 n n C7 H71 PLM sing 418 n n C7 H72 PLM sing 419 n n C8 C9 PLM sing 420 n n C8 H81 PLM sing 421 n n C8 H82 PLM sing 422 n n C9 CA PLM sing 423 n n C9 H91 PLM sing 424 n n C9 H92 PLM sing 425 n n CA CB PLM sing 426 n n CA HA1 PLM sing 427 n n CA HA2 PLM sing 428 n n CB CC PLM sing 429 n n CB HB1 PLM sing 430 n n CB HB2 PLM sing 431 n n CC CD PLM sing 432 n n CC HC1 PLM sing 433 n n CC HC2 PLM sing 434 n n CD CE PLM sing 435 n n CD HD1 PLM sing 436 n n CD HD2 PLM sing 437 n n CE CF PLM sing 438 n n CE HE1 PLM sing 439 n n CE HE2 PLM sing 440 n n CF CG PLM sing 441 n n CF HF1 PLM sing 442 n n CF HF2 PLM sing 443 n n CG HG1 PLM sing 444 n n CG HG2 PLM sing 445 n n CG HG3 PLM sing 446 n n # _atom_sites.entry_id 4BEY _atom_sites.fract_transf_matrix[1][1] 0.004125 _atom_sites.fract_transf_matrix[1][2] 0.002381 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 A 1 1327 1327 SO4 SO4 . E 5 ACT A 1 1328 1328 ACT ACT . F 6 PLM A 1 1329 1329 PLM PLM . G 7 BOG A 1 1334 1334 BOG BOG . H 8 HOH A 1 2001 2001 HOH HOH . H 8 HOH A 2 2002 2002 HOH HOH . H 8 HOH A 3 2003 2003 HOH HOH . H 8 HOH A 4 2004 2004 HOH HOH . H 8 HOH A 5 2005 2005 HOH HOH . H 8 HOH A 6 2006 2006 HOH HOH . H 8 HOH A 7 2007 2007 HOH HOH . H 8 HOH A 8 2008 2008 HOH HOH . H 8 HOH A 9 2009 2009 HOH HOH . H 8 HOH A 10 2010 2010 HOH HOH . H 8 HOH A 11 2011 2011 HOH HOH . H 8 HOH A 12 2012 2012 HOH HOH . H 8 HOH A 13 2013 2013 HOH HOH . H 8 HOH A 14 2014 2014 HOH HOH . H 8 HOH A 15 2015 2015 HOH HOH . H 8 HOH A 16 2016 2016 HOH HOH . H 8 HOH A 17 2017 2017 HOH HOH . H 8 HOH A 18 2018 2018 HOH HOH . H 8 HOH A 19 2019 2019 HOH HOH . H 8 HOH A 20 2020 2020 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . F 6 0.223 -29.303 56.025 1 81.9 ? C1 PLM 1329 A 1 HETATM 2 O O2 PLM . . . F 6 -0.06 -28.254 56.653 1 76.87 ? O2 PLM 1329 A 1 HETATM 3 C C2 PLM . . . F 6 1.31 -30.244 56.65 1 66.21 ? C2 PLM 1329 A 1 HETATM 4 C C3 PLM . . . F 6 2.121 -29.354 57.606 1 67.37 ? C3 PLM 1329 A 1 HETATM 5 C C4 PLM . . . F 6 3.274 -29.896 58.496 1 53.82 ? C4 PLM 1329 A 1 HETATM 6 C C5 PLM . . . F 6 4.478 -30.547 57.828 1 49.27 ? C5 PLM 1329 A 1 HETATM 7 C C6 PLM . . . F 6 5.523 -30.83 58.939 1 48.8 ? C6 PLM 1329 A 1 HETATM 8 C C7 PLM . . . F 6 6.762 -31.501 58.318 1 61.3 ? C7 PLM 1329 A 1 HETATM 9 C C8 PLM . . . F 6 7.918 -31.738 59.311 1 52.54 ? C8 PLM 1329 A 1 HETATM 10 C C9 PLM . . . F 6 9.068 -32.463 58.573 1 51.07 ? C9 PLM 1329 A 1 HETATM 11 C CA PLM . . . F 6 10.284 -32.635 59.496 1 53.23 ? CA PLM 1329 A 1 HETATM 12 C CB PLM . . . F 6 11.43 -33.416 58.836 1 46.8 ? CB PLM 1329 A 1 HETATM 13 C CC PLM . . . F 6 10.871 -34.801 58.517 1 50.3 ? CC PLM 1329 A 1 HETATM 14 C CD PLM . . . F 6 11.874 -35.737 57.841 1 45.32 ? CD PLM 1329 A 1 HETATM 15 C CE PLM . . . F 6 13.103 -36.022 58.686 1 42.91 ? CE PLM 1329 A 1 HETATM 16 C CF PLM . . . F 6 13.957 -36.959 57.839 1 42.91 ? CF PLM 1329 A 1 HETATM 17 C CG PLM . . . F 6 15.246 -37.322 58.563 1 43.09 ? CG PLM 1329 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 17 #