data_4BFR
#
_model_server_result.job_id            FzLk7V1zaz2p93wHHK-T-g 
_model_server_result.datetime_utc      '2024-11-25 14:14:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bfr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2000}' 
#
_entry.id    4BFR 
#
_exptl.entry_id    4BFR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              354.403 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[2-(2-METHYL-2,3-DIHYDRO-INDOL-1-YL)-2-OXO-ETHYL]-6-MORPHOLIN-4-YL-3H-PYRIMIDIN-4-ONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4BFR 
_cell.length_a            122.306 
_cell.length_b            129.034 
_cell.length_c            154.898 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BFR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C19 H22 N4 O3' 
_chem_comp.formula_weight    354.403 
_chem_comp.id                J82 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[2-(2-METHYL-2,3-DIHYDRO-INDOL-1-YL)-2-OXO-ETHYL]-6-MORPHOLIN-4-YL-3H-PYRIMIDIN-4-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N2 J82 sing 173 n n 
C1 N8 J82 sing 174 n n 
C1 C12 J82 doub 175 n n 
N2 C3 J82 sing 176 n n 
N2 C7 J82 sing 177 n n 
C3 C4 J82 sing 178 n n 
C4 O5 J82 sing 179 n n 
O5 C6 J82 sing 180 n n 
C6 C7 J82 sing 181 n n 
N8 C9 J82 doub 182 n n 
C9 N10 J82 sing 183 n n 
C9 C14 J82 sing 184 n n 
N10 C11 J82 sing 185 n n 
C11 C12 J82 sing 186 n n 
C11 O13 J82 doub 187 n n 
C14 C15 J82 sing 188 n n 
C15 O16 J82 doub 189 n n 
C15 N17 J82 sing 190 n n 
N17 C19 J82 sing 191 n n 
N17 C21 J82 sing 192 n n 
C18 C19 J82 sing 193 n n 
C18 C20 J82 sing 194 n n 
C19 C26 J82 sing 195 n n 
C20 C21 J82 sing 196 n y 
C20 C25 J82 doub 197 n y 
C21 C22 J82 doub 198 n y 
C22 C23 J82 sing 199 n y 
C23 C24 J82 doub 200 n y 
C24 C25 J82 sing 201 n y 
C12 H12 J82 sing 202 n n 
C3 H31C J82 sing 203 n n 
C3 H32C J82 sing 204 n n 
C7 H71C J82 sing 205 n n 
C7 H72C J82 sing 206 n n 
C4 H41C J82 sing 207 n n 
C4 H42C J82 sing 208 n n 
C6 H61C J82 sing 209 n n 
C6 H62C J82 sing 210 n n 
N10 H10 J82 sing 211 n n 
C14 H141 J82 sing 212 n n 
C14 H142 J82 sing 213 n n 
C19 H19 J82 sing 214 n n 
C18 H181 J82 sing 215 n n 
C18 H182 J82 sing 216 n n 
C26 H261 J82 sing 217 n n 
C26 H262 J82 sing 218 n n 
C26 H263 J82 sing 219 n n 
C25 H25 J82 sing 220 n n 
C22 H22 J82 sing 221 n n 
C23 H23 J82 sing 222 n n 
C24 H24 J82 sing 223 n n 
#
_atom_sites.entry_id                     4BFR 
_atom_sites.fract_transf_matrix[1][1]    0.008176 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00775 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006456 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 J82 A 1 2000 2000 J82 J82 . 
D 2 J82 B 1 2000 2000 J82 J82 . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2002 HOH HOH . 
E 3 HOH A 3 2003 2003 HOH HOH . 
E 3 HOH A 4 2004 2004 HOH HOH . 
E 3 HOH A 5 2005 2005 HOH HOH . 
E 3 HOH A 6 2006 2006 HOH HOH . 
E 3 HOH A 7 2007 2007 HOH HOH . 
E 3 HOH A 8 2008 2008 HOH HOH . 
E 3 HOH A 9 2009 2009 HOH HOH . 
E 3 HOH A 10 2010 2010 HOH HOH . 
E 3 HOH A 11 2011 2011 HOH HOH . 
E 3 HOH A 12 2012 2012 HOH HOH . 
E 3 HOH A 13 2013 2013 HOH HOH . 
E 3 HOH A 14 2014 2014 HOH HOH . 
E 3 HOH A 15 2015 2015 HOH HOH . 
E 3 HOH A 16 2016 2016 HOH HOH . 
E 3 HOH A 17 2017 2017 HOH HOH . 
E 3 HOH A 18 2018 2018 HOH HOH . 
E 3 HOH A 19 2019 2019 HOH HOH . 
E 3 HOH A 20 2020 2020 HOH HOH . 
E 3 HOH A 21 2021 2021 HOH HOH . 
E 3 HOH A 22 2022 2022 HOH HOH . 
E 3 HOH A 23 2023 2023 HOH HOH . 
E 3 HOH A 24 2024 2024 HOH HOH . 
E 3 HOH A 25 2025 2025 HOH HOH . 
E 3 HOH A 26 2026 2026 HOH HOH . 
E 3 HOH A 27 2027 2027 HOH HOH . 
E 3 HOH A 28 2028 2028 HOH HOH . 
E 3 HOH A 29 2029 2029 HOH HOH . 
E 3 HOH A 30 2030 2030 HOH HOH . 
E 3 HOH A 31 2031 2031 HOH HOH . 
E 3 HOH A 32 2032 2032 HOH HOH . 
E 3 HOH A 33 2033 2033 HOH HOH . 
F 3 HOH B 1 2001 2001 HOH HOH . 
F 3 HOH B 2 2002 2002 HOH HOH . 
F 3 HOH B 3 2003 2003 HOH HOH . 
F 3 HOH B 4 2004 2004 HOH HOH . 
F 3 HOH B 5 2005 2005 HOH HOH . 
F 3 HOH B 6 2006 2006 HOH HOH . 
F 3 HOH B 7 2007 2007 HOH HOH . 
F 3 HOH B 8 2008 2008 HOH HOH . 
F 3 HOH B 9 2009 2009 HOH HOH . 
F 3 HOH B 10 2010 2010 HOH HOH . 
F 3 HOH B 11 2011 2011 HOH HOH . 
F 3 HOH B 12 2012 2012 HOH HOH . 
F 3 HOH B 13 2013 2013 HOH HOH . 
F 3 HOH B 14 2014 2014 HOH HOH . 
F 3 HOH B 15 2015 2015 HOH HOH . 
F 3 HOH B 16 2016 2016 HOH HOH . 
F 3 HOH B 17 2017 2017 HOH HOH . 
F 3 HOH B 18 2018 2018 HOH HOH . 
F 3 HOH B 19 2019 2019 HOH HOH . 
F 3 HOH B 20 2020 2020 HOH HOH . 
F 3 HOH B 21 2021 2021 HOH HOH . 
F 3 HOH B 22 2022 2022 HOH HOH . 
F 3 HOH B 23 2023 2023 HOH HOH . 
F 3 HOH B 24 2024 2024 HOH HOH . 
F 3 HOH B 25 2025 2025 HOH HOH . 
F 3 HOH B 26 2026 2026 HOH HOH . 
F 3 HOH B 27 2027 2027 HOH HOH . 
F 3 HOH B 28 2028 2028 HOH HOH . 
F 3 HOH B 29 2029 2029 HOH HOH . 
F 3 HOH B 30 2030 2030 HOH HOH . 
F 3 HOH B 31 2031 2031 HOH HOH . 
F 3 HOH B 32 2032 2032 HOH HOH . 
F 3 HOH B 33 2033 2033 HOH HOH . 
F 3 HOH B 34 2034 2034 HOH HOH . 
F 3 HOH B 35 2035 2035 HOH HOH . 
F 3 HOH B 36 2036 2036 HOH HOH . 
F 3 HOH B 37 2037 2037 HOH HOH . 
F 3 HOH B 38 2038 2038 HOH HOH . 
F 3 HOH B 39 2039 2039 HOH HOH . 
F 3 HOH B 40 2040 2040 HOH HOH . 
F 3 HOH B 41 2041 2041 HOH HOH . 
F 3 HOH B 42 2042 2042 HOH HOH . 
F 3 HOH B 43 2043 2043 HOH HOH . 
F 3 HOH B 44 2044 2044 HOH HOH . 
F 3 HOH B 45 2045 2045 HOH HOH . 
F 3 HOH B 46 2046 2046 HOH HOH . 
F 3 HOH B 47 2047 2047 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 J82 . . . C 2 0.377 73.574 79.942 1 48.58 ? C1 J82 2000 A 1 
HETATM 2 N N2 J82 . . . C 2 0.924 72.684 80.852 1 48.48 ? N2 J82 2000 A 1 
HETATM 3 C C3 J82 . . . C 2 2.094 73.047 81.667 1 48.3 ? C3 J82 2000 A 1 
HETATM 4 C C4 J82 . . . C 2 2.878 71.806 82.025 1 48.41 ? C4 J82 2000 A 1 
HETATM 5 O O5 J82 . . . C 2 2.057 70.832 82.669 1 48.44 ? O5 J82 2000 A 1 
HETATM 6 C C6 J82 . . . C 2 0.985 70.442 81.811 1 48.41 ? C6 J82 2000 A 1 
HETATM 7 C C7 J82 . . . C 2 0.109 71.618 81.452 1 48.3 ? C7 J82 2000 A 1 
HETATM 8 N N8 J82 . . . C 2 1.118 74.66 79.583 1 48.79 ? N8 J82 2000 A 1 
HETATM 9 C C9 J82 . . . C 2 0.617 75.538 78.713 1 49.2 ? C9 J82 2000 A 1 
HETATM 10 N N10 J82 . . . C 2 -0.65 75.386 78.125 1 48.97 ? N10 J82 2000 A 1 
HETATM 11 C C11 J82 . . . C 2 -1.464 74.309 78.436 1 48.78 ? C11 J82 2000 A 1 
HETATM 12 C C12 J82 . . . C 2 -0.913 73.389 79.379 1 48.58 ? C12 J82 2000 A 1 
HETATM 13 O O13 J82 . . . C 2 -2.578 74.218 77.903 1 48.76 ? O13 J82 2000 A 1 
HETATM 14 C C14 J82 . . . C 2 1.358 76.8 78.337 1 49.86 ? C14 J82 2000 A 1 
HETATM 15 C C15 J82 . . . C 2 1.147 77.973 79.273 1 50.62 ? C15 J82 2000 A 1 
HETATM 16 O O16 J82 . . . C 2 0.011 78.221 79.646 1 50.72 ? O16 J82 2000 A 1 
HETATM 17 N N17 J82 . . . C 2 2.211 78.744 79.664 1 51.28 ? N17 J82 2000 A 1 
HETATM 18 C C18 J82 . . . C 2 4.519 79.169 80.134 1 51.47 ? C18 J82 2000 A 1 
HETATM 19 C C19 J82 . . . C 2 3.614 78.538 79.085 1 51.39 ? C19 J82 2000 A 1 
HETATM 20 C C20 J82 . . . C 2 3.605 80.078 80.911 1 51.66 ? C20 J82 2000 A 1 
HETATM 21 C C21 J82 . . . C 2 2.276 79.712 80.703 1 51.49 ? C21 J82 2000 A 1 
HETATM 22 C C22 J82 . . . C 2 1.247 80.319 81.422 1 51.27 ? C22 J82 2000 A 1 
HETATM 23 C C23 J82 . . . C 2 1.568 81.315 82.34 1 51.48 ? C23 J82 2000 A 1 
HETATM 24 C C24 J82 . . . C 2 2.887 81.7 82.532 1 51.67 ? C24 J82 2000 A 1 
HETATM 25 C C25 J82 . . . C 2 3.906 81.087 81.819 1 51.86 ? C25 J82 2000 A 1 
HETATM 26 C C26 J82 . . . C 2 3.791 79.263 77.757 1 51.38 ? C26 J82 2000 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           65 
_model_server_stats.create_model_time_ms    157 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          42 
_model_server_stats.element_count           26 
#