data_4BGG # _model_server_result.job_id jxEqC73RG03QeGNjwrz4Tg _model_server_result.datetime_utc '2024-11-23 08:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bgg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1000}' # _entry.id 4BGG # _exptl.entry_id 4BGG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 405.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{4-[5-(3,4,5-trimethoxyphenyl)pyridin-3-yl]phenyl}piperazine _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.93 _cell.angle_gamma 90 _cell.entry_id 4BGG _cell.length_a 85.38 _cell.length_b 99.85 _cell.length_c 187.438 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BGG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,Q 1 1 B,J,K,L,M,R 2 1 C,N,O,S,T,U 3 1 D,P,V,W 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 J N N ? 2 N N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 395 1_555 C SG CYS 197 C CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? disulf ? disulf2 B SG CYS 197 B CYS 395 1_555 D SG CYS 197 D CYS 395 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? # _chem_comp.formula 'C24 H27 N3 O3' _chem_comp.formula_weight 405.489 _chem_comp.id 844 _chem_comp.mon_nstd_flag . _chem_comp.name 1-{4-[5-(3,4,5-trimethoxyphenyl)pyridin-3-yl]phenyl}piperazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 O02 844 sing 1 n n O02 C03 844 sing 2 n n C03 C04 844 sing 3 n y C03 C10 844 doub 4 n y C04 O05 844 sing 5 n n C04 C07 844 doub 6 n y O05 C06 844 sing 7 n n C07 C08 844 sing 8 n y C07 O29 844 sing 9 n n C08 C09 844 doub 10 n y C09 C10 844 sing 11 n y C09 C11 844 sing 12 n n C11 C12 844 doub 13 n y C11 C16 844 sing 14 n y C12 C13 844 sing 15 n y C13 C14 844 doub 16 n y C13 C17 844 sing 17 n n C14 N15 844 sing 18 n y N15 C16 844 doub 19 n y C17 C18 844 sing 20 n y C17 C22 844 doub 21 n y C18 C19 844 doub 22 n y C19 C20 844 sing 23 n y C20 C21 844 doub 24 n y C20 N23 844 sing 25 n n C21 C22 844 sing 26 n y N23 C24 844 sing 27 n n N23 C28 844 sing 28 n n C24 C25 844 sing 29 n n C25 N26 844 sing 30 n n N26 C27 844 sing 31 n n C27 C28 844 sing 32 n n O29 C30 844 sing 33 n n C01 H011 844 sing 34 n n C01 H012 844 sing 35 n n C01 H013 844 sing 36 n n C10 H10 844 sing 37 n n C06 H061 844 sing 38 n n C06 H062 844 sing 39 n n C06 H063 844 sing 40 n n C08 H08 844 sing 41 n n C12 H12 844 sing 42 n n C16 H16 844 sing 43 n n C14 H14 844 sing 44 n n C18 H18 844 sing 45 n n C22 H22 844 sing 46 n n C19 H19 844 sing 47 n n C21 H21 844 sing 48 n n C24 H241 844 sing 49 n n C24 H242 844 sing 50 n n C28 H281 844 sing 51 n n C28 H282 844 sing 52 n n C25 H251 844 sing 53 n n C25 H252 844 sing 54 n n N26 H26 844 sing 55 n n C27 H271 844 sing 56 n n C27 H272 844 sing 57 n n C30 H301 844 sing 58 n n C30 H302 844 sing 59 n n C30 H303 844 sing 60 n n # _atom_sites.entry_id 4BGG _atom_sites.fract_transf_matrix[1][1] 0.011712 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000599 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 844 A 1 1000 1000 844 844 . F 3 FLC A 1 1001 1001 FLC FLC . G 3 FLC A 1 1002 1002 FLC FLC . H 3 FLC A 1 1003 1003 FLC FLC . I 4 EDO A 1 1004 1004 EDO EDO . J 2 844 B 1 1000 1000 844 844 . K 3 FLC B 1 1001 1001 FLC FLC . L 3 FLC B 1 1002 1002 FLC FLC . M 3 FLC B 1 1003 1003 FLC FLC . N 2 844 C 1 1000 1000 844 844 . O 3 FLC C 1 1001 1001 FLC FLC . P 2 844 D 1 1000 1000 844 844 . Q 5 HOH A 1 2001 2001 HOH HOH . Q 5 HOH A 2 2002 2002 HOH HOH . Q 5 HOH A 3 2003 2003 HOH HOH . Q 5 HOH A 4 2004 2004 HOH HOH . Q 5 HOH A 5 2005 2005 HOH HOH . Q 5 HOH A 6 2006 2006 HOH HOH . Q 5 HOH A 7 2007 2007 HOH HOH . Q 5 HOH A 8 2008 2008 HOH HOH . Q 5 HOH A 9 2009 2009 HOH HOH . Q 5 HOH A 10 2010 2010 HOH HOH . Q 5 HOH A 11 2011 2011 HOH HOH . Q 5 HOH A 12 2012 2012 HOH HOH . Q 5 HOH A 13 2013 2013 HOH HOH . Q 5 HOH A 14 2014 2014 HOH HOH . Q 5 HOH A 15 2015 2015 HOH HOH . Q 5 HOH A 16 2016 2016 HOH HOH . Q 5 HOH A 17 2017 2017 HOH HOH . Q 5 HOH A 18 2018 2018 HOH HOH . Q 5 HOH A 19 2019 2019 HOH HOH . Q 5 HOH A 20 2020 2020 HOH HOH . Q 5 HOH A 21 2021 2021 HOH HOH . Q 5 HOH A 22 2022 2022 HOH HOH . Q 5 HOH A 23 2023 2023 HOH HOH . Q 5 HOH A 24 2024 2024 HOH HOH . Q 5 HOH A 25 2025 2025 HOH HOH . Q 5 HOH A 26 2026 2026 HOH HOH . Q 5 HOH A 27 2027 2027 HOH HOH . Q 5 HOH A 28 2028 2028 HOH HOH . Q 5 HOH A 29 2029 2029 HOH HOH . Q 5 HOH A 30 2030 2030 HOH HOH . Q 5 HOH A 31 2031 2031 HOH HOH . Q 5 HOH A 32 2032 2032 HOH HOH . Q 5 HOH A 33 2033 2033 HOH HOH . Q 5 HOH A 34 2034 2034 HOH HOH . Q 5 HOH A 35 2035 2035 HOH HOH . Q 5 HOH A 36 2036 2036 HOH HOH . Q 5 HOH A 37 2037 2037 HOH HOH . Q 5 HOH A 38 2038 2038 HOH HOH . Q 5 HOH A 39 2039 2039 HOH HOH . Q 5 HOH A 40 2040 2040 HOH HOH . Q 5 HOH A 41 2041 2041 HOH HOH . Q 5 HOH A 42 2042 2042 HOH HOH . Q 5 HOH A 43 2043 2043 HOH HOH . Q 5 HOH A 44 2044 2044 HOH HOH . Q 5 HOH A 45 2045 2045 HOH HOH . Q 5 HOH A 46 2046 2046 HOH HOH . Q 5 HOH A 47 2047 2047 HOH HOH . Q 5 HOH A 48 2048 2048 HOH HOH . Q 5 HOH A 49 2049 2049 HOH HOH . R 5 HOH B 1 2001 2001 HOH HOH . R 5 HOH B 2 2002 2002 HOH HOH . R 5 HOH B 3 2003 2003 HOH HOH . R 5 HOH B 4 2004 2004 HOH HOH . R 5 HOH B 5 2005 2005 HOH HOH . R 5 HOH B 6 2006 2006 HOH HOH . R 5 HOH B 7 2007 2007 HOH HOH . R 5 HOH B 8 2008 2008 HOH HOH . R 5 HOH B 9 2009 2009 HOH HOH . R 5 HOH B 10 2010 2010 HOH HOH . R 5 HOH B 11 2011 2011 HOH HOH . R 5 HOH B 12 2012 2012 HOH HOH . R 5 HOH B 13 2013 2013 HOH HOH . R 5 HOH B 14 2014 2014 HOH HOH . R 5 HOH B 15 2015 2015 HOH HOH . R 5 HOH B 16 2016 2016 HOH HOH . R 5 HOH B 17 2017 2017 HOH HOH . R 5 HOH B 18 2018 2018 HOH HOH . R 5 HOH B 19 2019 2019 HOH HOH . R 5 HOH B 20 2020 2020 HOH HOH . R 5 HOH B 21 2021 2021 HOH HOH . R 5 HOH B 22 2022 2022 HOH HOH . R 5 HOH B 23 2023 2023 HOH HOH . R 5 HOH B 24 2024 2024 HOH HOH . R 5 HOH B 25 2025 2025 HOH HOH . R 5 HOH B 26 2026 2026 HOH HOH . R 5 HOH B 27 2027 2027 HOH HOH . R 5 HOH B 28 2028 2028 HOH HOH . R 5 HOH B 29 2029 2029 HOH HOH . R 5 HOH B 30 2030 2030 HOH HOH . R 5 HOH B 31 2031 2031 HOH HOH . R 5 HOH B 32 2032 2032 HOH HOH . R 5 HOH B 33 2033 2033 HOH HOH . R 5 HOH B 34 2034 2034 HOH HOH . R 5 HOH B 35 2035 2035 HOH HOH . R 5 HOH B 36 2036 2036 HOH HOH . R 5 HOH B 37 2037 2037 HOH HOH . R 5 HOH B 38 2038 2038 HOH HOH . R 5 HOH B 39 2039 2039 HOH HOH . R 5 HOH B 40 2040 2040 HOH HOH . R 5 HOH B 41 2041 2041 HOH HOH . R 5 HOH B 42 2042 2042 HOH HOH . R 5 HOH B 43 2043 2043 HOH HOH . R 5 HOH B 44 2044 2044 HOH HOH . R 5 HOH B 45 2045 2045 HOH HOH . R 5 HOH B 46 2046 2046 HOH HOH . R 5 HOH B 47 2047 2047 HOH HOH . R 5 HOH B 48 2048 2048 HOH HOH . R 5 HOH B 49 2049 2049 HOH HOH . R 5 HOH B 50 2050 2050 HOH HOH . R 5 HOH B 51 2051 2051 HOH HOH . R 5 HOH B 52 2052 2052 HOH HOH . R 5 HOH B 53 2053 2053 HOH HOH . R 5 HOH B 54 2054 2054 HOH HOH . R 5 HOH B 55 2055 2055 HOH HOH . R 5 HOH B 56 2056 2056 HOH HOH . R 5 HOH B 57 2057 2057 HOH HOH . R 5 HOH B 58 2058 2058 HOH HOH . R 5 HOH B 59 2059 2059 HOH HOH . R 5 HOH B 60 2060 2060 HOH HOH . S 5 HOH C 1 2001 2001 HOH HOH . S 5 HOH C 2 2002 2002 HOH HOH . S 5 HOH C 3 2003 2003 HOH HOH . S 5 HOH C 4 2004 2004 HOH HOH . S 5 HOH C 5 2005 2005 HOH HOH . S 5 HOH C 6 2006 2006 HOH HOH . S 5 HOH C 7 2007 2007 HOH HOH . S 5 HOH C 8 2008 2008 HOH HOH . S 5 HOH C 9 2009 2009 HOH HOH . S 5 HOH C 10 2010 2010 HOH HOH . S 5 HOH C 11 2011 2011 HOH HOH . S 5 HOH C 12 2012 2012 HOH HOH . S 5 HOH C 13 2013 2013 HOH HOH . S 5 HOH C 14 2014 2014 HOH HOH . S 5 HOH C 15 2015 2015 HOH HOH . S 5 HOH C 16 2016 2016 HOH HOH . S 5 HOH C 17 2017 2017 HOH HOH . S 5 HOH C 18 2018 2018 HOH HOH . S 5 HOH C 19 2019 2019 HOH HOH . S 5 HOH C 20 2020 2020 HOH HOH . S 5 HOH C 21 2021 2021 HOH HOH . T 5 HOH C 1 3028 3028 HOH HOH . U 5 HOH C 1 3030 3030 HOH HOH . V 5 HOH D 1 2001 2001 HOH HOH . V 5 HOH D 2 2002 2002 HOH HOH . V 5 HOH D 3 2003 2003 HOH HOH . V 5 HOH D 4 2004 2004 HOH HOH . V 5 HOH D 5 2005 2005 HOH HOH . V 5 HOH D 6 2006 2006 HOH HOH . V 5 HOH D 7 2007 2007 HOH HOH . V 5 HOH D 8 2008 2008 HOH HOH . V 5 HOH D 9 2009 2009 HOH HOH . V 5 HOH D 10 2010 2010 HOH HOH . V 5 HOH D 11 2011 2011 HOH HOH . V 5 HOH D 12 2012 2012 HOH HOH . V 5 HOH D 13 2013 2013 HOH HOH . V 5 HOH D 14 2014 2014 HOH HOH . V 5 HOH D 15 2015 2015 HOH HOH . V 5 HOH D 16 2016 2016 HOH HOH . V 5 HOH D 17 2017 2017 HOH HOH . V 5 HOH D 18 2018 2018 HOH HOH . V 5 HOH D 19 2019 2019 HOH HOH . V 5 HOH D 20 2020 2020 HOH HOH . V 5 HOH D 21 2021 2021 HOH HOH . V 5 HOH D 22 2022 2022 HOH HOH . V 5 HOH D 23 2023 2023 HOH HOH . V 5 HOH D 24 2024 2024 HOH HOH . V 5 HOH D 25 2025 2025 HOH HOH . V 5 HOH D 26 2026 2026 HOH HOH . V 5 HOH D 27 2027 2027 HOH HOH . W 5 HOH D 1 2029 2029 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 844 . . . J 2 45.262 -2.566 37.428 1 33.05 ? C01 844 1000 B 1 HETATM 2 O O02 844 . . . J 2 44.804 -2.494 38.689 1 28.83 ? O02 844 1000 B 1 HETATM 3 C C03 844 . . . J 2 43.437 -2.66 38.877 1 26.17 ? C03 844 1000 B 1 HETATM 4 C C04 844 . . . J 2 42.928 -2.214 40.14 1 27.56 ? C04 844 1000 B 1 HETATM 5 O O05 844 . . . J 2 43.806 -1.68 41.091 1 25.28 ? O05 844 1000 B 1 HETATM 6 C C06 844 . . . J 2 44.597 -2.68 41.641 1 25.74 ? C06 844 1000 B 1 HETATM 7 C C07 844 . . . J 2 41.572 -2.34 40.425 1 27.89 ? C07 844 1000 B 1 HETATM 8 C C08 844 . . . J 2 40.678 -2.883 39.404 1 27.86 ? C08 844 1000 B 1 HETATM 9 C C09 844 . . . J 2 41.176 -3.271 38.13 1 27.5 ? C09 844 1000 B 1 HETATM 10 C C10 844 . . . J 2 42.606 -3.153 37.853 1 28.16 ? C10 844 1000 B 1 HETATM 11 C C11 844 . . . J 2 40.207 -3.81 37.087 1 25.79 ? C11 844 1000 B 1 HETATM 12 C C12 844 . . . J 2 39.059 -3.073 36.863 1 22.83 ? C12 844 1000 B 1 HETATM 13 C C13 844 . . . J 2 38.161 -3.558 35.954 1 26.93 ? C13 844 1000 B 1 HETATM 14 C C14 844 . . . J 2 38.425 -4.756 35.275 1 25.2 ? C14 844 1000 B 1 HETATM 15 N N15 844 . . . J 2 39.544 -5.461 35.53 1 26.57 ? N15 844 1000 B 1 HETATM 16 C C16 844 . . . J 2 40.429 -5.03 36.404 1 28.56 ? C16 844 1000 B 1 HETATM 17 C C17 844 . . . J 2 36.892 -2.808 35.689 1 29.23 ? C17 844 1000 B 1 HETATM 18 C C18 844 . . . J 2 36.281 -2.084 36.694 1 30.64 ? C18 844 1000 B 1 HETATM 19 C C19 844 . . . J 2 35.044 -1.391 36.418 1 33.51 ? C19 844 1000 B 1 HETATM 20 C C20 844 . . . J 2 34.48 -1.467 35.103 1 34.87 ? C20 844 1000 B 1 HETATM 21 C C21 844 . . . J 2 35.056 -2.193 34.159 1 29.31 ? C21 844 1000 B 1 HETATM 22 C C22 844 . . . J 2 36.273 -2.907 34.458 1 27.09 ? C22 844 1000 B 1 HETATM 23 N N23 844 . . . J 2 33.311 -0.801 34.815 1 38.49 ? N23 844 1000 B 1 HETATM 24 C C24 844 . . . J 2 32.386 -1.1 33.794 1 44.81 ? C24 844 1000 B 1 HETATM 25 C C25 844 . . . J 2 31.838 0.17 33.142 1 47.5 ? C25 844 1000 B 1 HETATM 26 N N26 844 . . . J 2 31.097 0.946 34.087 1 43.93 ? N26 844 1000 B 1 HETATM 27 C C27 844 . . . J 2 31.703 1.044 35.383 1 46.24 ? C27 844 1000 B 1 HETATM 28 C C28 844 . . . J 2 33.145 0.486 35.413 1 45.6 ? C28 844 1000 B 1 HETATM 29 O O29 844 . . . J 2 41.144 -1.908 41.719 1 28.22 ? O29 844 1000 B 1 HETATM 30 C C30 844 . . . J 2 39.806 -1.759 41.99 1 26.85 ? C30 844 1000 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #