data_4BGG # _model_server_result.job_id hE4bj8xlijw181dsQwuTyg _model_server_result.datetime_utc '2024-10-11 00:29:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bgg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1001}' # _entry.id 4BGG # _exptl.entry_id 4BGG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.93 _cell.angle_gamma 90 _cell.entry_id 4BGG _cell.length_a 85.38 _cell.length_b 99.85 _cell.length_c 187.438 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BGG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,Q 1 1 B,J,K,L,M,R 2 1 C,N,O,S,T,U 3 1 D,P,V,W 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 395 1_555 C SG CYS 197 C CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? disulf ? disulf2 B SG CYS 197 B CYS 395 1_555 D SG CYS 197 D CYS 395 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 152 n n CAC OA1 FLC doub 153 n n CAC OA2 FLC sing 154 n n CA CB FLC sing 155 n n CA HA1 FLC sing 156 n n CA HA2 FLC sing 157 n n CB CBC FLC sing 158 n n CB CG FLC sing 159 n n CB OHB FLC sing 160 n n CBC OB1 FLC doub 161 n n CBC OB2 FLC sing 162 n n CG CGC FLC sing 163 n n CG HG1 FLC sing 164 n n CG HG2 FLC sing 165 n n CGC OG1 FLC doub 166 n n CGC OG2 FLC sing 167 n n OHB HOB FLC sing 168 n n # _atom_sites.entry_id 4BGG _atom_sites.fract_transf_matrix[1][1] 0.011712 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000599 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 844 A 1 1000 1000 844 844 . F 3 FLC A 1 1001 1001 FLC FLC . G 3 FLC A 1 1002 1002 FLC FLC . H 3 FLC A 1 1003 1003 FLC FLC . I 4 EDO A 1 1004 1004 EDO EDO . J 2 844 B 1 1000 1000 844 844 . K 3 FLC B 1 1001 1001 FLC FLC . L 3 FLC B 1 1002 1002 FLC FLC . M 3 FLC B 1 1003 1003 FLC FLC . N 2 844 C 1 1000 1000 844 844 . O 3 FLC C 1 1001 1001 FLC FLC . P 2 844 D 1 1000 1000 844 844 . Q 5 HOH A 1 2001 2001 HOH HOH . Q 5 HOH A 2 2002 2002 HOH HOH . Q 5 HOH A 3 2003 2003 HOH HOH . Q 5 HOH A 4 2004 2004 HOH HOH . Q 5 HOH A 5 2005 2005 HOH HOH . Q 5 HOH A 6 2006 2006 HOH HOH . Q 5 HOH A 7 2007 2007 HOH HOH . Q 5 HOH A 8 2008 2008 HOH HOH . Q 5 HOH A 9 2009 2009 HOH HOH . Q 5 HOH A 10 2010 2010 HOH HOH . Q 5 HOH A 11 2011 2011 HOH HOH . Q 5 HOH A 12 2012 2012 HOH HOH . Q 5 HOH A 13 2013 2013 HOH HOH . Q 5 HOH A 14 2014 2014 HOH HOH . Q 5 HOH A 15 2015 2015 HOH HOH . Q 5 HOH A 16 2016 2016 HOH HOH . Q 5 HOH A 17 2017 2017 HOH HOH . Q 5 HOH A 18 2018 2018 HOH HOH . Q 5 HOH A 19 2019 2019 HOH HOH . Q 5 HOH A 20 2020 2020 HOH HOH . Q 5 HOH A 21 2021 2021 HOH HOH . Q 5 HOH A 22 2022 2022 HOH HOH . Q 5 HOH A 23 2023 2023 HOH HOH . Q 5 HOH A 24 2024 2024 HOH HOH . Q 5 HOH A 25 2025 2025 HOH HOH . Q 5 HOH A 26 2026 2026 HOH HOH . Q 5 HOH A 27 2027 2027 HOH HOH . Q 5 HOH A 28 2028 2028 HOH HOH . Q 5 HOH A 29 2029 2029 HOH HOH . Q 5 HOH A 30 2030 2030 HOH HOH . Q 5 HOH A 31 2031 2031 HOH HOH . Q 5 HOH A 32 2032 2032 HOH HOH . Q 5 HOH A 33 2033 2033 HOH HOH . Q 5 HOH A 34 2034 2034 HOH HOH . Q 5 HOH A 35 2035 2035 HOH HOH . Q 5 HOH A 36 2036 2036 HOH HOH . Q 5 HOH A 37 2037 2037 HOH HOH . Q 5 HOH A 38 2038 2038 HOH HOH . Q 5 HOH A 39 2039 2039 HOH HOH . Q 5 HOH A 40 2040 2040 HOH HOH . Q 5 HOH A 41 2041 2041 HOH HOH . Q 5 HOH A 42 2042 2042 HOH HOH . Q 5 HOH A 43 2043 2043 HOH HOH . Q 5 HOH A 44 2044 2044 HOH HOH . Q 5 HOH A 45 2045 2045 HOH HOH . Q 5 HOH A 46 2046 2046 HOH HOH . Q 5 HOH A 47 2047 2047 HOH HOH . Q 5 HOH A 48 2048 2048 HOH HOH . Q 5 HOH A 49 2049 2049 HOH HOH . R 5 HOH B 1 2001 2001 HOH HOH . R 5 HOH B 2 2002 2002 HOH HOH . R 5 HOH B 3 2003 2003 HOH HOH . R 5 HOH B 4 2004 2004 HOH HOH . R 5 HOH B 5 2005 2005 HOH HOH . R 5 HOH B 6 2006 2006 HOH HOH . R 5 HOH B 7 2007 2007 HOH HOH . R 5 HOH B 8 2008 2008 HOH HOH . R 5 HOH B 9 2009 2009 HOH HOH . R 5 HOH B 10 2010 2010 HOH HOH . R 5 HOH B 11 2011 2011 HOH HOH . R 5 HOH B 12 2012 2012 HOH HOH . R 5 HOH B 13 2013 2013 HOH HOH . R 5 HOH B 14 2014 2014 HOH HOH . R 5 HOH B 15 2015 2015 HOH HOH . R 5 HOH B 16 2016 2016 HOH HOH . R 5 HOH B 17 2017 2017 HOH HOH . R 5 HOH B 18 2018 2018 HOH HOH . R 5 HOH B 19 2019 2019 HOH HOH . R 5 HOH B 20 2020 2020 HOH HOH . R 5 HOH B 21 2021 2021 HOH HOH . R 5 HOH B 22 2022 2022 HOH HOH . R 5 HOH B 23 2023 2023 HOH HOH . R 5 HOH B 24 2024 2024 HOH HOH . R 5 HOH B 25 2025 2025 HOH HOH . R 5 HOH B 26 2026 2026 HOH HOH . R 5 HOH B 27 2027 2027 HOH HOH . R 5 HOH B 28 2028 2028 HOH HOH . R 5 HOH B 29 2029 2029 HOH HOH . R 5 HOH B 30 2030 2030 HOH HOH . R 5 HOH B 31 2031 2031 HOH HOH . R 5 HOH B 32 2032 2032 HOH HOH . R 5 HOH B 33 2033 2033 HOH HOH . R 5 HOH B 34 2034 2034 HOH HOH . R 5 HOH B 35 2035 2035 HOH HOH . R 5 HOH B 36 2036 2036 HOH HOH . R 5 HOH B 37 2037 2037 HOH HOH . R 5 HOH B 38 2038 2038 HOH HOH . R 5 HOH B 39 2039 2039 HOH HOH . R 5 HOH B 40 2040 2040 HOH HOH . R 5 HOH B 41 2041 2041 HOH HOH . R 5 HOH B 42 2042 2042 HOH HOH . R 5 HOH B 43 2043 2043 HOH HOH . R 5 HOH B 44 2044 2044 HOH HOH . R 5 HOH B 45 2045 2045 HOH HOH . R 5 HOH B 46 2046 2046 HOH HOH . R 5 HOH B 47 2047 2047 HOH HOH . R 5 HOH B 48 2048 2048 HOH HOH . R 5 HOH B 49 2049 2049 HOH HOH . R 5 HOH B 50 2050 2050 HOH HOH . R 5 HOH B 51 2051 2051 HOH HOH . R 5 HOH B 52 2052 2052 HOH HOH . R 5 HOH B 53 2053 2053 HOH HOH . R 5 HOH B 54 2054 2054 HOH HOH . R 5 HOH B 55 2055 2055 HOH HOH . R 5 HOH B 56 2056 2056 HOH HOH . R 5 HOH B 57 2057 2057 HOH HOH . R 5 HOH B 58 2058 2058 HOH HOH . R 5 HOH B 59 2059 2059 HOH HOH . R 5 HOH B 60 2060 2060 HOH HOH . S 5 HOH C 1 2001 2001 HOH HOH . S 5 HOH C 2 2002 2002 HOH HOH . S 5 HOH C 3 2003 2003 HOH HOH . S 5 HOH C 4 2004 2004 HOH HOH . S 5 HOH C 5 2005 2005 HOH HOH . S 5 HOH C 6 2006 2006 HOH HOH . S 5 HOH C 7 2007 2007 HOH HOH . S 5 HOH C 8 2008 2008 HOH HOH . S 5 HOH C 9 2009 2009 HOH HOH . S 5 HOH C 10 2010 2010 HOH HOH . S 5 HOH C 11 2011 2011 HOH HOH . S 5 HOH C 12 2012 2012 HOH HOH . S 5 HOH C 13 2013 2013 HOH HOH . S 5 HOH C 14 2014 2014 HOH HOH . S 5 HOH C 15 2015 2015 HOH HOH . S 5 HOH C 16 2016 2016 HOH HOH . S 5 HOH C 17 2017 2017 HOH HOH . S 5 HOH C 18 2018 2018 HOH HOH . S 5 HOH C 19 2019 2019 HOH HOH . S 5 HOH C 20 2020 2020 HOH HOH . S 5 HOH C 21 2021 2021 HOH HOH . T 5 HOH C 1 3028 3028 HOH HOH . U 5 HOH C 1 3030 3030 HOH HOH . V 5 HOH D 1 2001 2001 HOH HOH . V 5 HOH D 2 2002 2002 HOH HOH . V 5 HOH D 3 2003 2003 HOH HOH . V 5 HOH D 4 2004 2004 HOH HOH . V 5 HOH D 5 2005 2005 HOH HOH . V 5 HOH D 6 2006 2006 HOH HOH . V 5 HOH D 7 2007 2007 HOH HOH . V 5 HOH D 8 2008 2008 HOH HOH . V 5 HOH D 9 2009 2009 HOH HOH . V 5 HOH D 10 2010 2010 HOH HOH . V 5 HOH D 11 2011 2011 HOH HOH . V 5 HOH D 12 2012 2012 HOH HOH . V 5 HOH D 13 2013 2013 HOH HOH . V 5 HOH D 14 2014 2014 HOH HOH . V 5 HOH D 15 2015 2015 HOH HOH . V 5 HOH D 16 2016 2016 HOH HOH . V 5 HOH D 17 2017 2017 HOH HOH . V 5 HOH D 18 2018 2018 HOH HOH . V 5 HOH D 19 2019 2019 HOH HOH . V 5 HOH D 20 2020 2020 HOH HOH . V 5 HOH D 21 2021 2021 HOH HOH . V 5 HOH D 22 2022 2022 HOH HOH . V 5 HOH D 23 2023 2023 HOH HOH . V 5 HOH D 24 2024 2024 HOH HOH . V 5 HOH D 25 2025 2025 HOH HOH . V 5 HOH D 26 2026 2026 HOH HOH . V 5 HOH D 27 2027 2027 HOH HOH . W 5 HOH D 1 2029 2029 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . K 3 39.238 -14.682 33.319 1 61.93 ? CAC FLC 1001 B 1 HETATM 2 C CA FLC . . . K 3 39.173 -13.231 32.874 1 63.09 ? CA FLC 1001 B 1 HETATM 3 C CB FLC . . . K 3 37.712 -12.909 32.567 1 62.25 ? CB FLC 1001 B 1 HETATM 4 C CBC FLC . . . K 3 36.791 -13.962 33.126 1 62.81 ? CBC FLC 1001 B 1 HETATM 5 C CG FLC . . . K 3 37.582 -12.807 31.05 1 53.68 ? CG FLC 1001 B 1 HETATM 6 C CGC FLC . . . K 3 36.558 -11.758 30.615 1 62.94 ? CGC FLC 1001 B 1 HETATM 7 O OA1 FLC . . . K 3 39.123 -15.045 34.56 1 48.87 ? OA1 FLC 1001 B 1 HETATM 8 O OA2 FLC . . . K 3 39.369 -15.439 32.328 1 63.86 ? OA2 FLC 1001 B 1 HETATM 9 O OB1 FLC . . . K 3 36.702 -15.113 32.664 1 79.78 ? OB1 FLC 1001 B 1 HETATM 10 O OB2 FLC . . . K 3 36.114 -13.596 34.077 1 46.58 ? OB2 FLC 1001 B 1 HETATM 11 O OG1 FLC . . . K 3 35.695 -12.106 29.76 1 71.34 ? OG1 FLC 1001 B 1 HETATM 12 O OG2 FLC . . . K 3 36.613 -10.571 31.071 1 52.99 ? OG2 FLC 1001 B 1 HETATM 13 O OHB FLC . . . K 3 37.201 -11.815 33.392 1 56.14 ? OHB FLC 1001 B 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #