data_4BGQ # _model_server_result.job_id Kf4yObpXFMN9XJTB7kuFRw _model_server_result.datetime_utc '2024-11-05 10:55:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bgq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1000}' # _entry.id 4BGQ # _exptl.entry_id 4BGQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 359.428 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-({4-[(3-cyclopentyl-1H-pyrazol-5-yl)amino]pyrimidin-2-yl}amino)phenyl]acetonitrile' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BGQ _cell.length_a 51.942 _cell.length_b 65.507 _cell.length_c 102.899 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BGQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 N7' _chem_comp.formula_weight 359.428 _chem_comp.id 38R _chem_comp.mon_nstd_flag . _chem_comp.name '[4-({4-[(3-cyclopentyl-1H-pyrazol-5-yl)amino]pyrimidin-2-yl}amino)phenyl]acetonitrile' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 38R doub 1 n y C4 N3 38R sing 2 n y C4 N1G 38R sing 3 n n C5 C6 38R sing 4 n y C6 N1 38R doub 5 n y N1 C2 38R sing 6 n y N3 C2 38R doub 7 n y C1U C1T 38R sing 8 n n C1U C01 38R sing 9 n n C1T C1R 38R sing 10 n n C1T C03 38R sing 11 n n C1R C1S 38R sing 12 n y C1R N1Q 38R doub 13 n y C1S C1H 38R doub 14 n y N1Q N1P 38R sing 15 n y N1P C1H 38R sing 16 n y C1H N1G 38R sing 17 n n C1Y C01 38R sing 18 n n C1Y C03 38R sing 19 n n C2 N1I 38R sing 20 n n N1I C1J 38R sing 21 n n C1J C1O 38R doub 22 n y C1J C1K 38R sing 23 n y C1O C1N 38R sing 24 n y C1N C1M 38R doub 25 n y C1K C1L 38R doub 26 n y C1L C1M 38R sing 27 n y C1M C1V 38R sing 28 n n C1V C1Z 38R sing 29 n n C1Z N1A 38R trip 30 n n C5 H5 38R sing 31 n n N1G H1G 38R sing 32 n n C6 H6 38R sing 33 n n C1U H1U1 38R sing 34 n n C1U H1U2 38R sing 35 n n C1T H1T 38R sing 36 n n C01 H011 38R sing 37 n n C01 H012 38R sing 38 n n C03 H031 38R sing 39 n n C03 H032 38R sing 40 n n C1S H1S 38R sing 41 n n N1P H1P 38R sing 42 n n C1Y H1Y1 38R sing 43 n n C1Y H1Y2 38R sing 44 n n N1I H1I 38R sing 45 n n C1O H1O 38R sing 46 n n C1K H1K 38R sing 47 n n C1N H1N 38R sing 48 n n C1L H1L 38R sing 49 n n C1V H1V1 38R sing 50 n n C1V H1V2 38R sing 51 n n # _atom_sites.entry_id 4BGQ _atom_sites.fract_transf_matrix[1][1] 0.019252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 1003 1003 NA NA . C 3 38R A 1 1000 1000 38R 38R . D 4 EDO A 1 1001 1001 EDO EDO . E 5 ACT A 1 1002 1002 ACT ACT . F 5 ACT A 1 1004 1004 ACT ACT . G 4 EDO A 1 1005 1005 EDO EDO . H 6 HOH A 1 2001 2001 HOH HOH . H 6 HOH A 2 2002 2002 HOH HOH . H 6 HOH A 3 2003 2003 HOH HOH . H 6 HOH A 4 2004 2004 HOH HOH . H 6 HOH A 5 2005 2005 HOH HOH . H 6 HOH A 6 2006 2006 HOH HOH . H 6 HOH A 7 2007 2007 HOH HOH . H 6 HOH A 8 2008 2008 HOH HOH . H 6 HOH A 9 2009 2009 HOH HOH . H 6 HOH A 10 2010 2010 HOH HOH . H 6 HOH A 11 2011 2011 HOH HOH . H 6 HOH A 12 2012 2012 HOH HOH . H 6 HOH A 13 2013 2013 HOH HOH . H 6 HOH A 14 2014 2014 HOH HOH . H 6 HOH A 15 2015 2015 HOH HOH . H 6 HOH A 16 2016 2016 HOH HOH . H 6 HOH A 17 2017 2017 HOH HOH . H 6 HOH A 18 2018 2018 HOH HOH . H 6 HOH A 19 2019 2019 HOH HOH . H 6 HOH A 20 2020 2020 HOH HOH . H 6 HOH A 21 2021 2021 HOH HOH . H 6 HOH A 22 2022 2022 HOH HOH . H 6 HOH A 23 2023 2023 HOH HOH . H 6 HOH A 24 2024 2024 HOH HOH . H 6 HOH A 25 2025 2025 HOH HOH . H 6 HOH A 26 2026 2026 HOH HOH . H 6 HOH A 27 2027 2027 HOH HOH . H 6 HOH A 28 2028 2028 HOH HOH . H 6 HOH A 29 2029 2029 HOH HOH . H 6 HOH A 30 2030 2030 HOH HOH . H 6 HOH A 31 2031 2031 HOH HOH . H 6 HOH A 32 2032 2032 HOH HOH . H 6 HOH A 33 2033 2033 HOH HOH . H 6 HOH A 34 2034 2034 HOH HOH . H 6 HOH A 35 2035 2035 HOH HOH . H 6 HOH A 36 2036 2036 HOH HOH . H 6 HOH A 37 2037 2037 HOH HOH . H 6 HOH A 38 2038 2038 HOH HOH . H 6 HOH A 39 2039 2039 HOH HOH . H 6 HOH A 40 2040 2040 HOH HOH . H 6 HOH A 41 2041 2041 HOH HOH . H 6 HOH A 42 2042 2042 HOH HOH . H 6 HOH A 43 2043 2043 HOH HOH . H 6 HOH A 44 2044 2044 HOH HOH . H 6 HOH A 45 2045 2045 HOH HOH . H 6 HOH A 46 2046 2046 HOH HOH . H 6 HOH A 47 2047 2047 HOH HOH . H 6 HOH A 48 2048 2048 HOH HOH . H 6 HOH A 49 2049 2049 HOH HOH . H 6 HOH A 50 2050 2050 HOH HOH . H 6 HOH A 51 2051 2051 HOH HOH . H 6 HOH A 52 2052 2052 HOH HOH . H 6 HOH A 53 2053 2053 HOH HOH . H 6 HOH A 54 2054 2054 HOH HOH . H 6 HOH A 55 2055 2055 HOH HOH . H 6 HOH A 56 2056 2056 HOH HOH . H 6 HOH A 57 2057 2057 HOH HOH . H 6 HOH A 58 2058 2058 HOH HOH . H 6 HOH A 59 2059 2059 HOH HOH . H 6 HOH A 60 2060 2060 HOH HOH . H 6 HOH A 61 2061 2061 HOH HOH . H 6 HOH A 62 2062 2062 HOH HOH . H 6 HOH A 63 2063 2063 HOH HOH . H 6 HOH A 64 2064 2064 HOH HOH . H 6 HOH A 65 2065 2065 HOH HOH . H 6 HOH A 66 2066 2066 HOH HOH . H 6 HOH A 67 2067 2067 HOH HOH . H 6 HOH A 68 2068 2068 HOH HOH . H 6 HOH A 69 2069 2069 HOH HOH . H 6 HOH A 70 2070 2070 HOH HOH . H 6 HOH A 71 2071 2071 HOH HOH . H 6 HOH A 72 2072 2072 HOH HOH . H 6 HOH A 73 2073 2073 HOH HOH . H 6 HOH A 74 2074 2074 HOH HOH . H 6 HOH A 75 2075 2075 HOH HOH . H 6 HOH A 76 2076 2076 HOH HOH . H 6 HOH A 77 2077 2077 HOH HOH . H 6 HOH A 78 2078 2078 HOH HOH . H 6 HOH A 79 2079 2079 HOH HOH . H 6 HOH A 80 2080 2080 HOH HOH . H 6 HOH A 81 2081 2081 HOH HOH . H 6 HOH A 82 2082 2082 HOH HOH . H 6 HOH A 83 2083 2083 HOH HOH . H 6 HOH A 84 2084 2084 HOH HOH . H 6 HOH A 85 2085 2085 HOH HOH . H 6 HOH A 86 2086 2086 HOH HOH . H 6 HOH A 87 2087 2087 HOH HOH . H 6 HOH A 88 2088 2088 HOH HOH . H 6 HOH A 89 2089 2089 HOH HOH . H 6 HOH A 90 2090 2090 HOH HOH . H 6 HOH A 91 2091 2091 HOH HOH . H 6 HOH A 92 2092 2092 HOH HOH . H 6 HOH A 93 2093 2093 HOH HOH . H 6 HOH A 94 2094 2094 HOH HOH . H 6 HOH A 95 2095 2095 HOH HOH . H 6 HOH A 96 2096 2096 HOH HOH . H 6 HOH A 97 2097 2097 HOH HOH . H 6 HOH A 98 2098 2098 HOH HOH . H 6 HOH A 99 2099 2099 HOH HOH . H 6 HOH A 100 2100 2100 HOH HOH . H 6 HOH A 101 2101 2101 HOH HOH . H 6 HOH A 102 2102 2102 HOH HOH . H 6 HOH A 103 2103 2103 HOH HOH . H 6 HOH A 104 2104 2104 HOH HOH . H 6 HOH A 105 2105 2105 HOH HOH . H 6 HOH A 106 2106 2106 HOH HOH . H 6 HOH A 107 2107 2107 HOH HOH . H 6 HOH A 108 2108 2108 HOH HOH . H 6 HOH A 109 2109 2109 HOH HOH . H 6 HOH A 110 2110 2110 HOH HOH . H 6 HOH A 111 2111 2111 HOH HOH . H 6 HOH A 112 2112 2112 HOH HOH . H 6 HOH A 113 2113 2113 HOH HOH . H 6 HOH A 114 2114 2114 HOH HOH . H 6 HOH A 115 2115 2115 HOH HOH . H 6 HOH A 116 2116 2116 HOH HOH . H 6 HOH A 117 2117 2117 HOH HOH . H 6 HOH A 118 2118 2118 HOH HOH . H 6 HOH A 119 2119 2119 HOH HOH . H 6 HOH A 120 2120 2120 HOH HOH . H 6 HOH A 121 2121 2121 HOH HOH . H 6 HOH A 122 2122 2122 HOH HOH . H 6 HOH A 123 2123 2123 HOH HOH . H 6 HOH A 124 2124 2124 HOH HOH . H 6 HOH A 125 2125 2125 HOH HOH . H 6 HOH A 126 2126 2126 HOH HOH . H 6 HOH A 127 2127 2127 HOH HOH . H 6 HOH A 128 2128 2128 HOH HOH . H 6 HOH A 129 2129 2129 HOH HOH . H 6 HOH A 130 2130 2130 HOH HOH . H 6 HOH A 131 2131 2131 HOH HOH . H 6 HOH A 132 2132 2132 HOH HOH . H 6 HOH A 133 2133 2133 HOH HOH . H 6 HOH A 134 2134 2134 HOH HOH . H 6 HOH A 135 2135 2135 HOH HOH . H 6 HOH A 136 2136 2136 HOH HOH . H 6 HOH A 137 2137 2137 HOH HOH . H 6 HOH A 138 2138 2138 HOH HOH . H 6 HOH A 139 2139 2139 HOH HOH . H 6 HOH A 140 2140 2140 HOH HOH . H 6 HOH A 141 2141 2141 HOH HOH . H 6 HOH A 142 2142 2142 HOH HOH . H 6 HOH A 143 2143 2143 HOH HOH . H 6 HOH A 144 2144 2144 HOH HOH . H 6 HOH A 145 2145 2145 HOH HOH . H 6 HOH A 146 2146 2146 HOH HOH . H 6 HOH A 147 2147 2147 HOH HOH . H 6 HOH A 148 2148 2148 HOH HOH . H 6 HOH A 149 2149 2149 HOH HOH . H 6 HOH A 150 2150 2150 HOH HOH . H 6 HOH A 151 2151 2151 HOH HOH . H 6 HOH A 152 2152 2152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 38R . . . C 3 47.491 29.859 51.837 1 24.09 ? C4 38R 1000 A 1 HETATM 2 C C5 38R . . . C 3 46.597 29.863 50.767 1 27.35 ? C5 38R 1000 A 1 HETATM 3 C C6 38R . . . C 3 45.806 30.968 50.542 1 26.25 ? C6 38R 1000 A 1 HETATM 4 N N1 38R . . . C 3 45.936 32.008 51.383 1 25.98 ? N1 38R 1000 A 1 HETATM 5 N N3 38R . . . C 3 47.584 30.916 52.652 1 24.59 ? N3 38R 1000 A 1 HETATM 6 C C1U 38R . . . C 3 51.249 29.289 57.044 1 25.94 ? C1U 38R 1000 A 1 HETATM 7 C C1T 38R . . . C 3 51.682 29.188 55.605 1 23.91 ? C1T 38R 1000 A 1 HETATM 8 C C1R 38R . . . C 3 50.831 28.66 54.52 1 21.88 ? C1R 38R 1000 A 1 HETATM 9 C C1S 38R . . . C 3 49.825 29.35 53.891 1 21.75 ? C1S 38R 1000 A 1 HETATM 10 N N1Q 38R . . . C 3 50.923 27.462 53.957 1 21.95 ? N1Q 38R 1000 A 1 HETATM 11 N N1P 38R . . . C 3 50.011 27.357 52.981 1 20.92 ? N1P 38R 1000 A 1 HETATM 12 C C1H 38R . . . C 3 49.332 28.489 52.921 1 21.5 ? C1H 38R 1000 A 1 HETATM 13 N N1G 38R . . . C 3 48.271 28.671 52.003 1 23.22 ? N1G 38R 1000 A 1 HETATM 14 C C1Y 38R . . . C 3 52.705 31.102 56.561 1 26.36 ? C1Y 38R 1000 A 1 HETATM 15 C C2 38R . . . C 3 46.782 31.983 52.412 1 27.05 ? C2 38R 1000 A 1 HETATM 16 N N1I 38R . . . C 3 46.811 33.156 53.192 1 28.64 ? N1I 38R 1000 A 1 HETATM 17 C C1J 38R . . . C 3 47.377 33.213 54.486 1 34.19 ? C1J 38R 1000 A 1 HETATM 18 C C1K 38R . . . C 3 47.196 32.207 55.409 1 35.93 ? C1K 38R 1000 A 1 HETATM 19 C C1L 38R . . . C 3 47.757 32.345 56.66 1 38.94 ? C1L 38R 1000 A 1 HETATM 20 C C1O 38R . . . C 3 48.083 34.35 54.809 1 39.33 ? C1O 38R 1000 A 1 HETATM 21 C C1N 38R . . . C 3 48.654 34.474 56.063 1 42.98 ? C1N 38R 1000 A 1 HETATM 22 C C1M 38R . . . C 3 48.478 33.472 57 1 40.08 ? C1M 38R 1000 A 1 HETATM 23 C C1V 38R . . . C 3 49.102 33.614 58.341 1 42.38 ? C1V 38R 1000 A 1 HETATM 24 C C01 38R . . . C 3 52.258 30.233 57.669 1 25.55 ? C01 38R 1000 A 1 HETATM 25 C C1Z 38R . . . C 3 50.546 33.956 58.365 1 40.85 ? C1Z 38R 1000 A 1 HETATM 26 C C03 38R . . . C 3 52.702 30.225 55.377 1 24.88 ? C03 38R 1000 A 1 HETATM 27 N N1A 38R . . . C 3 51.645 34.273 58.368 1 43.58 ? N1A 38R 1000 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 231 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #