data_4BJ3 # _model_server_result.job_id J_Z4ju7oJ5HUAPtEPeH9mg _model_server_result.datetime_utc '2024-11-10 19:30:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bj3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 4BJ3 # _exptl.entry_id 4BJ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BJ3 _cell.length_a 83.004 _cell.length_b 83.004 _cell.length_c 175.256 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BJ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C PRO 2 C PRO 3 1_555 C N HYP 3 C HYP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 C C HYP 3 C HYP 4 1_555 C N GLY 4 C GLY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 C C PRO 5 C PRO 6 1_555 C N HYP 6 C HYP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 C C HYP 6 C HYP 7 1_555 C N GLY 7 C GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 C C PHE 8 C PHE 9 1_555 C N HYP 9 C HYP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 C C HYP 9 C HYP 10 1_555 C N GLY 10 C GLY 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 C C PRO 14 C PRO 15 1_555 C N HYP 15 C HYP 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 C C HYP 15 C HYP 16 1_555 C N GLY 16 C GLY 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 C C PRO 17 C PRO 18 1_555 C N HYP 18 C HYP 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 D C PRO 2 D PRO 3 1_555 D N HYP 3 D HYP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 D C HYP 3 D HYP 4 1_555 D N GLY 4 D GLY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 D C PRO 5 D PRO 6 1_555 D N HYP 6 D HYP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 D C HYP 6 D HYP 7 1_555 D N GLY 7 D GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 D C PHE 8 D PHE 9 1_555 D N HYP 9 D HYP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale15 D C HYP 9 D HYP 10 1_555 D N GLY 10 D GLY 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale16 D C PRO 14 D PRO 15 1_555 D N HYP 15 D HYP 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 D C HYP 15 D HYP 16 1_555 D N GLY 16 D GLY 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 D C PRO 17 D PRO 18 1_555 D N HYP 18 D HYP 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 E C PRO 2 E PRO 3 1_555 E N HYP 3 E HYP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 E C HYP 3 E HYP 4 1_555 E N GLY 4 E GLY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 E C PRO 5 E PRO 6 1_555 E N HYP 6 E HYP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale22 E C HYP 6 E HYP 7 1_555 E N GLY 7 E GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale23 E C PHE 8 E PHE 9 1_555 E N HYP 9 E HYP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale24 E C HYP 9 E HYP 10 1_555 E N GLY 10 E GLY 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 E C PRO 14 E PRO 15 1_555 E N HYP 15 E HYP 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 E C HYP 15 E HYP 16 1_555 E N GLY 16 E GLY 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale27 E C PRO 17 E PRO 18 1_555 E N HYP 18 E HYP 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OG SER 33 A SER 153 1_555 F MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc2 A OG SER 35 A SER 155 1_555 F MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc3 A OG1 THR 101 A THR 221 1_555 F MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc4 F MG MG . A MG 801 1_555 E OE2 GLU 11 E GLU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 B OG SER 33 B SER 153 1_555 I MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc6 B OG SER 35 B SER 155 1_555 I MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc7 B OG1 THR 101 B THR 221 1_555 I MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc8 I MG MG . B MG 802 1_555 C OE2 GLU 11 C GLU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4BJ3 _atom_sites.fract_transf_matrix[1][1] 0.012048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 MG A 1 801 801 MG MG . G 4 CL A 1 803 803 CL CL . H 5 BTB A 1 804 804 BTB BTB . I 3 MG B 1 802 802 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 103.354 _atom_site.Cartn_y 43.251 _atom_site.Cartn_z 50.972 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 801 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #