data_4BJB # _model_server_result.job_id lm0MCnPGxg1VdakR8jiKTA _model_server_result.datetime_utc '2024-10-19 08:35:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bjb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2166}' # _entry.id 4BJB # _exptl.entry_id 4BJB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 295.336 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BJB _cell.length_a 66.33 _cell.length_b 66.33 _cell.length_c 121.39 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BJB _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? # _chem_comp.formula 'C17 H17 N3 O2' _chem_comp.formula_weight 295.336 _chem_comp.id P34 _chem_comp.mon_nstd_flag . _chem_comp.name N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA N P34 sing 250 n n CAA HAA1 P34 sing 251 n n CAA HAA2 P34 sing 252 n n CAA HAA3 P34 sing 253 n n N CAB P34 sing 254 n n N CA P34 sing 255 n n CAB HAB1 P34 sing 256 n n CAB HAB2 P34 sing 257 n n CAB HAB3 P34 sing 258 n n CA C P34 sing 259 n n CA HA1 P34 sing 260 n n CA HA2 P34 sing 261 n n C O P34 doub 262 n n C NAM P34 sing 263 n n NAM CAP P34 sing 264 n n NAM HAM P34 sing 265 n n CAP CAK P34 sing 266 n y CAP CAG P34 doub 267 n y CAK CAU P34 doub 268 n y CAK HAK P34 sing 269 n n CAU CAT P34 sing 270 n y CAU CAR P34 sing 271 n y CAT CAI P34 sing 272 n y CAT CAS P34 doub 273 n y CAI CAF P34 doub 274 n y CAI HAI P34 sing 275 n n CAF CAE P34 sing 276 n y CAF HAF P34 sing 277 n n CAE CAH P34 doub 278 n y CAE HAE P34 sing 279 n n CAH CAS P34 sing 280 n y CAH HAH P34 sing 281 n n CAS CAQ P34 sing 282 n y CAQ OAD P34 doub 283 n n CAQ NAN P34 sing 284 n y NAN CAR P34 sing 285 n y NAN HAN P34 sing 286 n n CAR CAJ P34 doub 287 n y CAJ CAG P34 sing 288 n y CAJ HAJ P34 sing 289 n n CAG HAG P34 sing 290 n n # _atom_sites.entry_id 4BJB _atom_sites.fract_transf_matrix[1][1] 0.015076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 2162 2162 SO4 SO4 . C 2 SO4 A 1 2163 2163 SO4 SO4 . D 3 GOL A 1 2164 2164 GOL GOL . E 4 ZN A 1 2165 2165 ZN ZN . F 5 P34 A 1 2166 2166 P34 P34 . G 6 HOH A 1 2001 2001 HOH HOH . G 6 HOH A 2 2002 2002 HOH HOH . G 6 HOH A 3 2003 2003 HOH HOH . G 6 HOH A 4 2004 2004 HOH HOH . G 6 HOH A 5 2005 2005 HOH HOH . G 6 HOH A 6 2006 2006 HOH HOH . G 6 HOH A 7 2007 2007 HOH HOH . G 6 HOH A 8 2008 2008 HOH HOH . G 6 HOH A 9 2009 2009 HOH HOH . G 6 HOH A 10 2010 2010 HOH HOH . G 6 HOH A 11 2011 2011 HOH HOH . G 6 HOH A 12 2012 2012 HOH HOH . G 6 HOH A 13 2013 2013 HOH HOH . G 6 HOH A 14 2014 2014 HOH HOH . G 6 HOH A 15 2015 2015 HOH HOH . G 6 HOH A 16 2016 2016 HOH HOH . G 6 HOH A 17 2017 2017 HOH HOH . G 6 HOH A 18 2018 2018 HOH HOH . G 6 HOH A 19 2019 2019 HOH HOH . G 6 HOH A 20 2020 2020 HOH HOH . G 6 HOH A 21 2021 2021 HOH HOH . G 6 HOH A 22 2022 2022 HOH HOH . G 6 HOH A 23 2023 2023 HOH HOH . G 6 HOH A 24 2024 2024 HOH HOH . G 6 HOH A 25 2025 2025 HOH HOH . G 6 HOH A 26 2026 2026 HOH HOH . G 6 HOH A 27 2027 2027 HOH HOH . G 6 HOH A 28 2028 2028 HOH HOH . G 6 HOH A 29 2029 2029 HOH HOH . G 6 HOH A 30 2030 2030 HOH HOH . G 6 HOH A 31 2031 2031 HOH HOH . G 6 HOH A 32 2032 2032 HOH HOH . G 6 HOH A 33 2033 2033 HOH HOH . G 6 HOH A 34 2034 2034 HOH HOH . G 6 HOH A 35 2035 2035 HOH HOH . G 6 HOH A 36 2036 2036 HOH HOH . G 6 HOH A 37 2037 2037 HOH HOH . G 6 HOH A 38 2038 2038 HOH HOH . G 6 HOH A 39 2039 2039 HOH HOH . G 6 HOH A 40 2040 2040 HOH HOH . G 6 HOH A 41 2041 2041 HOH HOH . G 6 HOH A 42 2042 2042 HOH HOH . G 6 HOH A 43 2043 2043 HOH HOH . G 6 HOH A 44 2044 2044 HOH HOH . G 6 HOH A 45 2045 2045 HOH HOH . G 6 HOH A 46 2046 2046 HOH HOH . G 6 HOH A 47 2047 2047 HOH HOH . G 6 HOH A 48 2048 2048 HOH HOH . G 6 HOH A 49 2049 2049 HOH HOH . G 6 HOH A 50 2050 2050 HOH HOH . G 6 HOH A 51 2051 2051 HOH HOH . G 6 HOH A 52 2052 2052 HOH HOH . G 6 HOH A 53 2053 2053 HOH HOH . G 6 HOH A 54 2054 2054 HOH HOH . G 6 HOH A 55 2055 2055 HOH HOH . G 6 HOH A 56 2056 2056 HOH HOH . G 6 HOH A 57 2057 2057 HOH HOH . G 6 HOH A 58 2058 2058 HOH HOH . G 6 HOH A 59 2059 2059 HOH HOH . G 6 HOH A 60 2060 2060 HOH HOH . G 6 HOH A 61 2061 2061 HOH HOH . G 6 HOH A 62 2062 2062 HOH HOH . G 6 HOH A 63 2063 2063 HOH HOH . G 6 HOH A 64 2064 2064 HOH HOH . G 6 HOH A 65 2065 2065 HOH HOH . G 6 HOH A 66 2066 2066 HOH HOH . G 6 HOH A 67 2067 2067 HOH HOH . G 6 HOH A 68 2068 2068 HOH HOH . G 6 HOH A 69 2069 2069 HOH HOH . G 6 HOH A 70 2070 2070 HOH HOH . G 6 HOH A 71 2071 2071 HOH HOH . G 6 HOH A 72 2072 2072 HOH HOH . G 6 HOH A 73 2073 2073 HOH HOH . G 6 HOH A 74 2074 2074 HOH HOH . G 6 HOH A 75 2075 2075 HOH HOH . G 6 HOH A 76 2076 2076 HOH HOH . G 6 HOH A 77 2077 2077 HOH HOH . G 6 HOH A 78 2078 2078 HOH HOH . G 6 HOH A 79 2079 2079 HOH HOH . G 6 HOH A 80 2080 2080 HOH HOH . G 6 HOH A 81 2081 2081 HOH HOH . G 6 HOH A 82 2082 2082 HOH HOH . G 6 HOH A 83 2083 2083 HOH HOH . G 6 HOH A 84 2084 2084 HOH HOH . G 6 HOH A 85 2085 2085 HOH HOH . G 6 HOH A 86 2086 2086 HOH HOH . G 6 HOH A 87 2087 2087 HOH HOH . G 6 HOH A 88 2088 2088 HOH HOH . G 6 HOH A 89 2089 2089 HOH HOH . G 6 HOH A 90 2090 2090 HOH HOH . G 6 HOH A 91 2091 2091 HOH HOH . G 6 HOH A 92 2092 2092 HOH HOH . G 6 HOH A 93 2093 2093 HOH HOH . G 6 HOH A 94 2094 2094 HOH HOH . G 6 HOH A 95 2095 2095 HOH HOH . G 6 HOH A 96 2096 2096 HOH HOH . G 6 HOH A 97 2097 2097 HOH HOH . G 6 HOH A 98 2098 2098 HOH HOH . G 6 HOH A 99 2099 2099 HOH HOH . G 6 HOH A 100 2100 2100 HOH HOH . G 6 HOH A 101 2101 2101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA P34 . . . F 5 10.598 10.546 22.396 1 76.81 ? CAA P34 2166 A 1 HETATM 2 N N P34 . . . F 5 11.663 9.924 21.611 1 75.69 ? N P34 2166 A 1 HETATM 3 C CAB P34 . . . F 5 12.994 9.884 22.225 1 72.5 ? CAB P34 2166 A 1 HETATM 4 C CA P34 . . . F 5 11.217 8.502 21.664 1 67.2 ? CA P34 2166 A 1 HETATM 5 C C P34 . . . F 5 11.738 7.688 20.456 1 63.46 ? C P34 2166 A 1 HETATM 6 O O P34 . . . F 5 12.547 8.179 19.669 1 61.53 ? O P34 2166 A 1 HETATM 7 N NAM P34 . . . F 5 11.216 6.441 20.401 1 57.74 ? NAM P34 2166 A 1 HETATM 8 C CAP P34 . . . F 5 11.485 5.526 19.441 1 51.82 ? CAP P34 2166 A 1 HETATM 9 C CAK P34 . . . F 5 11.716 5.811 18.083 1 47.42 ? CAK P34 2166 A 1 HETATM 10 C CAU P34 . . . F 5 11.955 4.781 17.146 1 45.87 ? CAU P34 2166 A 1 HETATM 11 C CAT P34 . . . F 5 12.203 5.024 15.775 1 46.84 ? CAT P34 2166 A 1 HETATM 12 C CAI P34 . . . F 5 12.231 6.327 15.254 1 45.69 ? CAI P34 2166 A 1 HETATM 13 C CAF P34 . . . F 5 12.473 6.56 13.906 1 44.58 ? CAF P34 2166 A 1 HETATM 14 C CAE P34 . . . F 5 12.686 5.493 13.046 1 46.79 ? CAE P34 2166 A 1 HETATM 15 C CAH P34 . . . F 5 12.661 4.189 13.536 1 44.91 ? CAH P34 2166 A 1 HETATM 16 C CAS P34 . . . F 5 12.422 3.944 14.891 1 45.89 ? CAS P34 2166 A 1 HETATM 17 C CAQ P34 . . . F 5 12.4 2.626 15.363 1 42.37 ? CAQ P34 2166 A 1 HETATM 18 O OAD P34 . . . F 5 12.585 1.662 14.626 1 35.86 ? OAD P34 2166 A 1 HETATM 19 N NAN P34 . . . F 5 12.156 2.385 16.713 1 44.59 ? NAN P34 2166 A 1 HETATM 20 C CAR P34 . . . F 5 11.932 3.453 17.597 1 48.42 ? CAR P34 2166 A 1 HETATM 21 C CAJ P34 . . . F 5 11.69 3.165 18.939 1 50.96 ? CAJ P34 2166 A 1 HETATM 22 C CAG P34 . . . F 5 11.463 4.192 19.849 1 48.51 ? CAG P34 2166 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #