data_4BJC # _model_server_result.job_id jpEh1Hr2oAZtJAP-xfgrVA _model_server_result.datetime_utc '2024-11-04 20:28:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2162}' # _entry.id 4BJC # _exptl.entry_id 4BJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.364 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Rucaparib _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BJC _cell.length_a 65.3 _cell.length_b 65.3 _cell.length_c 122.91 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 E ZN ZN . A ZN 2165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? # _chem_comp.formula 'C19 H18 F N3 O' _chem_comp.formula_weight 323.364 _chem_comp.id RPB _chem_comp.mon_nstd_flag . _chem_comp.name Rucaparib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C7 RPB doub 277 n n C7 N1 RPB sing 278 n n C7 C4 RPB sing 279 n n N1 C8 RPB sing 280 n n C8 C9 RPB sing 281 n n C9 C10 RPB sing 282 n n C10 C5 RPB sing 283 n y C10 C11 RPB doub 284 n y C5 C4 RPB sing 285 n y C5 C6 RPB doub 286 n y C4 C3 RPB doub 287 n y C3 C2 RPB sing 288 n y C2 F1 RPB sing 289 n n C2 C1 RPB doub 290 n y C1 C6 RPB sing 291 n y C6 N2 RPB sing 292 n y N2 C11 RPB sing 293 n y C11 C12 RPB sing 294 n n C12 C14 RPB sing 295 n y C12 C13 RPB doub 296 n y C14 C15 RPB doub 297 n y C15 C16 RPB sing 298 n y C13 C17 RPB sing 299 n y C17 C16 RPB doub 300 n y C16 C18 RPB sing 301 n n C18 N3 RPB sing 302 n n N3 C19 RPB sing 303 n n N1 H1 RPB sing 304 n n C8 H81C RPB sing 305 n n C8 H82C RPB sing 306 n n C9 H91C RPB sing 307 n n C9 H92C RPB sing 308 n n C3 H3 RPB sing 309 n n C1 HA RPB sing 310 n n N2 H2 RPB sing 311 n n C14 H14 RPB sing 312 n n C13 H13 RPB sing 313 n n C15 H15 RPB sing 314 n n C17 H17 RPB sing 315 n n C18 H181 RPB sing 316 n n C18 H182 RPB sing 317 n n N3 HB RPB sing 318 n n C19 H191 RPB sing 319 n n C19 H192 RPB sing 320 n n C19 H193 RPB sing 321 n n # _atom_sites.entry_id 4BJC _atom_sites.fract_transf_matrix[1][1] 0.015314 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RPB A 1 2162 2162 RPB RPB . C 3 SO4 A 1 2163 2163 SO4 SO4 . D 3 SO4 A 1 2164 2164 SO4 SO4 . E 4 ZN A 1 2165 2165 ZN ZN . F 5 HOH A 1 2001 2001 HOH HOH . F 5 HOH A 2 2002 2002 HOH HOH . F 5 HOH A 3 2003 2003 HOH HOH . F 5 HOH A 4 2004 2004 HOH HOH . F 5 HOH A 5 2005 2005 HOH HOH . F 5 HOH A 6 2006 2006 HOH HOH . F 5 HOH A 7 2007 2007 HOH HOH . F 5 HOH A 8 2008 2008 HOH HOH . F 5 HOH A 9 2009 2009 HOH HOH . F 5 HOH A 10 2010 2010 HOH HOH . F 5 HOH A 11 2011 2011 HOH HOH . F 5 HOH A 12 2012 2012 HOH HOH . F 5 HOH A 13 2013 2013 HOH HOH . F 5 HOH A 14 2014 2014 HOH HOH . F 5 HOH A 15 2015 2015 HOH HOH . F 5 HOH A 16 2016 2016 HOH HOH . F 5 HOH A 17 2017 2017 HOH HOH . F 5 HOH A 18 2018 2018 HOH HOH . F 5 HOH A 19 2019 2019 HOH HOH . F 5 HOH A 20 2020 2020 HOH HOH . F 5 HOH A 21 2021 2021 HOH HOH . F 5 HOH A 22 2022 2022 HOH HOH . F 5 HOH A 23 2023 2023 HOH HOH . F 5 HOH A 24 2024 2024 HOH HOH . F 5 HOH A 25 2025 2025 HOH HOH . F 5 HOH A 26 2026 2026 HOH HOH . F 5 HOH A 27 2027 2027 HOH HOH . F 5 HOH A 28 2028 2028 HOH HOH . F 5 HOH A 29 2029 2029 HOH HOH . F 5 HOH A 30 2030 2030 HOH HOH . F 5 HOH A 31 2031 2031 HOH HOH . F 5 HOH A 32 2032 2032 HOH HOH . F 5 HOH A 33 2033 2033 HOH HOH . F 5 HOH A 34 2034 2034 HOH HOH . F 5 HOH A 35 2035 2035 HOH HOH . F 5 HOH A 36 2036 2036 HOH HOH . F 5 HOH A 37 2037 2037 HOH HOH . F 5 HOH A 38 2038 2038 HOH HOH . F 5 HOH A 39 2039 2039 HOH HOH . F 5 HOH A 40 2040 2040 HOH HOH . F 5 HOH A 41 2041 2041 HOH HOH . F 5 HOH A 42 2042 2042 HOH HOH . F 5 HOH A 43 2043 2043 HOH HOH . F 5 HOH A 44 2044 2044 HOH HOH . F 5 HOH A 45 2045 2045 HOH HOH . F 5 HOH A 46 2046 2046 HOH HOH . F 5 HOH A 47 2047 2047 HOH HOH . F 5 HOH A 48 2048 2048 HOH HOH . F 5 HOH A 49 2049 2049 HOH HOH . F 5 HOH A 50 2050 2050 HOH HOH . F 5 HOH A 51 2051 2051 HOH HOH . F 5 HOH A 52 2052 2052 HOH HOH . F 5 HOH A 53 2053 2053 HOH HOH . F 5 HOH A 54 2054 2054 HOH HOH . F 5 HOH A 55 2055 2055 HOH HOH . F 5 HOH A 56 2056 2056 HOH HOH . F 5 HOH A 57 2057 2057 HOH HOH . F 5 HOH A 58 2058 2058 HOH HOH . F 5 HOH A 59 2059 2059 HOH HOH . F 5 HOH A 60 2060 2060 HOH HOH . F 5 HOH A 61 2061 2061 HOH HOH . F 5 HOH A 62 2062 2062 HOH HOH . F 5 HOH A 63 2063 2063 HOH HOH . F 5 HOH A 64 2064 2064 HOH HOH . F 5 HOH A 65 2065 2065 HOH HOH . F 5 HOH A 66 2066 2066 HOH HOH . F 5 HOH A 67 2067 2067 HOH HOH . F 5 HOH A 68 2068 2068 HOH HOH . F 5 HOH A 69 2069 2069 HOH HOH . F 5 HOH A 70 2070 2070 HOH HOH . F 5 HOH A 71 2071 2071 HOH HOH . F 5 HOH A 72 2072 2072 HOH HOH . F 5 HOH A 73 2073 2073 HOH HOH . F 5 HOH A 74 2074 2074 HOH HOH . F 5 HOH A 75 2075 2075 HOH HOH . F 5 HOH A 76 2076 2076 HOH HOH . F 5 HOH A 77 2077 2077 HOH HOH . F 5 HOH A 78 2078 2078 HOH HOH . F 5 HOH A 79 2079 2079 HOH HOH . F 5 HOH A 80 2080 2080 HOH HOH . F 5 HOH A 81 2081 2081 HOH HOH . F 5 HOH A 82 2082 2082 HOH HOH . F 5 HOH A 83 2083 2083 HOH HOH . F 5 HOH A 84 2084 2084 HOH HOH . F 5 HOH A 85 2085 2085 HOH HOH . F 5 HOH A 86 2086 2086 HOH HOH . F 5 HOH A 87 2087 2087 HOH HOH . F 5 HOH A 88 2088 2088 HOH HOH . F 5 HOH A 89 2089 2089 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 RPB . . . B 2 12.544 2.096 14.988 1 30.44 ? O1 RPB 2162 A 1 HETATM 2 C C7 RPB . . . B 2 12.045 3.006 15.659 1 33.83 ? C7 RPB 2162 A 1 HETATM 3 N N1 RPB . . . B 2 11.55 2.625 16.905 1 30.51 ? N1 RPB 2162 A 1 HETATM 4 C C8 RPB . . . B 2 10.91 3.517 17.89 1 31.74 ? C8 RPB 2162 A 1 HETATM 5 C C9 RPB . . . B 2 11.818 4.693 18.264 1 32.31 ? C9 RPB 2162 A 1 HETATM 6 C C10 RPB . . . B 2 11.885 5.659 17.237 1 36.46 ? C10 RPB 2162 A 1 HETATM 7 C C5 RPB . . . B 2 11.99 5.467 15.909 1 37.05 ? C5 RPB 2162 A 1 HETATM 8 C C4 RPB . . . B 2 12.056 4.329 15.186 1 34.64 ? C4 RPB 2162 A 1 HETATM 9 C C3 RPB . . . B 2 12.152 4.413 13.79 1 32.93 ? C3 RPB 2162 A 1 HETATM 10 C C2 RPB . . . B 2 12.175 5.67 13.185 1 35.33 ? C2 RPB 2162 A 1 HETATM 11 F F1 RPB . . . B 2 12.272 5.809 11.82 1 32.82 ? F1 RPB 2162 A 1 HETATM 12 C C1 RPB . . . B 2 12.11 6.801 13.989 1 34.24 ? C1 RPB 2162 A 1 HETATM 13 C C6 RPB . . . B 2 12.017 6.673 15.313 1 37.13 ? C6 RPB 2162 A 1 HETATM 14 N N2 RPB . . . B 2 11.939 7.602 16.253 1 37.07 ? N2 RPB 2162 A 1 HETATM 15 C C11 RPB . . . B 2 11.861 6.999 17.438 1 41.45 ? C11 RPB 2162 A 1 HETATM 16 C C12 RPB . . . B 2 11.757 7.721 18.581 1 44.42 ? C12 RPB 2162 A 1 HETATM 17 C C14 RPB . . . B 2 12.389 7.382 19.784 1 47.6 ? C14 RPB 2162 A 1 HETATM 18 C C15 RPB . . . B 2 12.242 8.174 20.928 1 47.64 ? C15 RPB 2162 A 1 HETATM 19 C C13 RPB . . . B 2 10.991 8.891 18.564 1 48.51 ? C13 RPB 2162 A 1 HETATM 20 C C17 RPB . . . B 2 10.847 9.688 19.698 1 52.36 ? C17 RPB 2162 A 1 HETATM 21 C C16 RPB . . . B 2 11.459 9.328 20.898 1 56.05 ? C16 RPB 2162 A 1 HETATM 22 C C18 RPB . . . B 2 11.337 10.121 22.021 1 58.81 ? C18 RPB 2162 A 1 HETATM 23 N N3 RPB . . . B 2 10.171 9.769 22.846 1 61.53 ? N3 RPB 2162 A 1 HETATM 24 C C19 RPB . . . B 2 8.908 9.906 22.095 1 59.4 ? C19 RPB 2162 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #