data_4BLB # _model_server_result.job_id d9Xgh9wMlvvfzFyFxRJYng _model_server_result.datetime_utc '2024-10-25 20:23:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4blb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":910}' # _entry.id 4BLB # _exptl.entry_id 4BLB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.49 _cell.angle_gamma 90 _cell.entry_id 4BLB _cell.length_a 116.3 _cell.length_b 137.6 _cell.length_c 116.54 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BLB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,G,K,O 1 1 A,E,I,M 2 1 D,H,L,P 3 1 B,F,J,N 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n I GLC 1 I 1 GLC A 900 MAL 3 n I GLC 2 I 2 GLC A 900 MAL 3 n J GLC 1 J 1 GLC B 900 MAL 3 n J GLC 2 J 2 GLC B 900 MAL 3 n K GLC 1 K 1 GLC C 900 MAL 3 n K GLC 2 K 2 GLC C 900 MAL 3 n L GLC 1 L 1 GLC D 900 MAL 3 n L GLC 2 L 2 GLC D 900 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 I O4 GLC . I GLC 1 1_555 I C1 GLC . I GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 sing covale ? covale2 J O4 GLC . J GLC 1 1_555 J C1 GLC . J GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 sing covale ? covale3 K O4 GLC . K GLC 1 1_555 K C1 GLC . K GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 sing covale ? covale4 L O4 GLC . L GLC 1 1_555 L C1 GLC . L GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 sing metalc ? metalc1 A NE2 HIS 216 A HIS 216 1_555 P ZN ZN . D ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc2 A OE2 GLU 222 A GLU 222 1_555 P ZN ZN . D ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc3 A ND1 HIS 751 A HIS 751 1_555 M ZN ZN . A ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc4 A NE2 HIS 753 A HIS 753 1_555 M ZN ZN . A ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc5 M ZN ZN . A ZN 910 1_555 B NE2 HIS 216 B HIS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc6 M ZN ZN . A ZN 910 1_555 B OE1 GLU 222 B GLU 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc7 M ZN ZN . A ZN 910 1_555 B OE2 GLU 222 B GLU 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc8 B ND1 HIS 751 B HIS 751 1_555 N ZN ZN . B ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc9 B NE2 HIS 753 B HIS 753 1_555 N ZN ZN . B ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc10 N ZN ZN . B ZN 910 1_555 C NE2 HIS 216 C HIS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc11 N ZN ZN . B ZN 910 1_555 C OE2 GLU 222 C GLU 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc12 C ND1 HIS 751 C HIS 751 1_555 O ZN ZN . C ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc13 C NE2 HIS 753 C HIS 753 1_555 O ZN ZN . C ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc14 O ZN ZN . C ZN 910 1_555 D NE2 HIS 216 D HIS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc15 O ZN ZN . C ZN 910 1_555 D OE2 GLU 222 D GLU 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc16 D ND1 HIS 751 D HIS 751 1_555 P ZN ZN . D ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc17 D NE2 HIS 753 D HIS 753 1_555 P ZN ZN . D ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4BLB _atom_sites.fract_transf_matrix[1][1] 0.008598 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002383 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 ZN A 1 910 910 ZN ZN . N 4 ZN B 1 910 910 ZN ZN . O 4 ZN C 1 910 910 ZN ZN . P 4 ZN D 1 910 910 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 4 _atom_site.Cartn_x 1.987 _atom_site.Cartn_y -34.921 _atom_site.Cartn_z -87.464 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 98.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 910 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 187 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #