data_4BM9
#
_model_server_result.job_id            FE8Ny5OXGWe-OZ9HcsHwpA 
_model_server_result.datetime_utc      '2025-01-07 04:29:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bm9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1471}' 
#
_entry.id    4BM9 
#
_exptl.entry_id    4BM9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4BM9 
_cell.length_a            168.42 
_cell.length_b            168.42 
_cell.length_c            97.181 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BM9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 97.181 
4 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 97.181 
5 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
6 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 97.181 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 14 A CYS 150 1_555 B ZN ZN . A ZN 1466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc2 A SG CYS 18 A CYS 154 1_555 B ZN ZN . A ZN 1466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc3 A SG CYS 30 A CYS 166 1_555 E ZN ZN . A ZN 1469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc4 A SG CYS 33 A CYS 169 1_555 E ZN ZN . A ZN 1469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc5 A SG CYS 60 A CYS 196 1_555 E ZN ZN . A ZN 1469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc6 A SG CYS 65 A CYS 201 1_555 E ZN ZN . A ZN 1469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc7 A SG CYS 76 A CYS 212 1_555 B ZN ZN . A ZN 1466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc8 A NE2 HIS 79 A HIS 215 1_555 B ZN ZN . A ZN 1466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc9 A SG CYS 102 A CYS 238 1_555 F ZN ZN . A ZN 1470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc10 A SG CYS 105 A CYS 241 1_555 F ZN ZN . A ZN 1470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc11 A SG CYS 117 A CYS 253 1_555 C ZN ZN . A ZN 1467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc12 A ND1 HIS 121 A HIS 257 1_555 C ZN ZN . A ZN 1467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? 
metalc ? metalc13 A SG CYS 124 A CYS 260 1_555 F ZN ZN . A ZN 1470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc14 A SG CYS 127 A CYS 263 1_555 F ZN ZN . A ZN 1470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc15 A SG CYS 153 A CYS 289 1_555 C ZN ZN . A ZN 1467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc16 A SG CYS 157 A CYS 293 1_555 C ZN ZN . A ZN 1467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc17 A SG CYS 196 A CYS 332 1_555 G ZN ZN . A ZN 1471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? 
metalc ? metalc18 A SG CYS 201 A CYS 337 1_555 G ZN ZN . A ZN 1471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc19 A SG CYS 216 A CYS 352 1_555 G ZN ZN . A ZN 1471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc20 A SG CYS 229 A CYS 365 1_555 H ZN ZN . A ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
metalc ? metalc21 A NE2 HIS 237 A HIS 373 1_555 H ZN ZN . A ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc22 A SG CYS 241 A CYS 377 1_555 H ZN ZN . A ZN 1472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc23 A SG CYS 282 A CYS 418 1_555 I ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc24 A SG CYS 285 A CYS 421 1_555 I ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc25 A SG CYS 300 A CYS 436 1_555 I ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc26 A SG CYS 305 A CYS 441 1_555 I ZN ZN . A ZN 1473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc27 A SG CYS 310 A CYS 446 1_555 D ZN ZN . A ZN 1468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc28 A SG CYS 313 A CYS 449 1_555 D ZN ZN . A ZN 1468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc29 A SG CYS 321 A CYS 457 1_555 D ZN ZN . A ZN 1468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc30 A NE2 HIS 325 A HIS 461 1_555 D ZN ZN . A ZN 1468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4BM9 
_atom_sites.fract_transf_matrix[1][1]    0.005938 
_atom_sites.fract_transf_matrix[1][2]    0.003428 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006856 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01029 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1466 1466 ZN ZN . 
C 2 ZN A 1 1467 1467 ZN ZN . 
D 2 ZN A 1 1468 1468 ZN ZN . 
E 2 ZN A 1 1469 1469 ZN ZN . 
F 2 ZN A 1 1470 1470 ZN ZN . 
G 2 ZN A 1 1471 1471 ZN ZN . 
H 2 ZN A 1 1472 1472 ZN ZN . 
I 2 ZN A 1 1473 1473 ZN ZN . 
J 3 SO4 A 1 1474 1474 SO4 SO4 . 
K 3 SO4 A 1 1475 1475 SO4 SO4 . 
L 3 SO4 A 1 1476 1476 SO4 SO4 . 
M 4 GOL A 1 1477 1477 GOL GOL . 
N 5 HOH A 1 2001 2001 HOH HOH . 
N 5 HOH A 2 2002 2002 HOH HOH . 
N 5 HOH A 3 2003 2003 HOH HOH . 
N 5 HOH A 4 2004 2004 HOH HOH . 
N 5 HOH A 5 2005 2005 HOH HOH . 
N 5 HOH A 6 2006 2006 HOH HOH . 
N 5 HOH A 7 2007 2007 HOH HOH . 
N 5 HOH A 8 2008 2008 HOH HOH . 
N 5 HOH A 9 2009 2009 HOH HOH . 
N 5 HOH A 10 2010 2010 HOH HOH . 
N 5 HOH A 11 2011 2011 HOH HOH . 
N 5 HOH A 12 2012 2012 HOH HOH . 
N 5 HOH A 13 2013 2013 HOH HOH . 
N 5 HOH A 14 2014 2014 HOH HOH . 
N 5 HOH A 15 2015 2015 HOH HOH . 
N 5 HOH A 16 2016 2016 HOH HOH . 
N 5 HOH A 17 2017 2017 HOH HOH . 
N 5 HOH A 18 2018 2018 HOH HOH . 
N 5 HOH A 19 2019 2019 HOH HOH . 
N 5 HOH A 20 2020 2020 HOH HOH . 
N 5 HOH A 21 2021 2021 HOH HOH . 
N 5 HOH A 22 2022 2022 HOH HOH . 
N 5 HOH A 23 2023 2023 HOH HOH . 
N 5 HOH A 24 2024 2024 HOH HOH . 
N 5 HOH A 25 2025 2025 HOH HOH . 
N 5 HOH A 26 2026 2026 HOH HOH . 
N 5 HOH A 27 2027 2027 HOH HOH . 
N 5 HOH A 28 2028 2028 HOH HOH . 
N 5 HOH A 29 2029 2029 HOH HOH . 
N 5 HOH A 30 2030 2030 HOH HOH . 
N 5 HOH A 31 2031 2031 HOH HOH . 
N 5 HOH A 32 2032 2032 HOH HOH . 
N 5 HOH A 33 2033 2033 HOH HOH . 
N 5 HOH A 34 2034 2034 HOH HOH . 
N 5 HOH A 35 2035 2035 HOH HOH . 
N 5 HOH A 36 2036 2036 HOH HOH . 
N 5 HOH A 37 2037 2037 HOH HOH . 
N 5 HOH A 38 2038 2038 HOH HOH . 
N 5 HOH A 39 2039 2039 HOH HOH . 
N 5 HOH A 40 2040 2040 HOH HOH . 
N 5 HOH A 41 2041 2041 HOH HOH . 
N 5 HOH A 42 2042 2042 HOH HOH . 
N 5 HOH A 43 2043 2043 HOH HOH . 
N 5 HOH A 44 2044 2044 HOH HOH . 
N 5 HOH A 45 2045 2045 HOH HOH . 
N 5 HOH A 46 2046 2046 HOH HOH . 
N 5 HOH A 47 2047 2047 HOH HOH . 
N 5 HOH A 48 2048 2048 HOH HOH . 
N 5 HOH A 49 2049 2049 HOH HOH . 
N 5 HOH A 50 2050 2050 HOH HOH . 
N 5 HOH A 51 2051 2051 HOH HOH . 
N 5 HOH A 52 2052 2052 HOH HOH . 
N 5 HOH A 53 2053 2053 HOH HOH . 
N 5 HOH A 54 2054 2054 HOH HOH . 
N 5 HOH A 55 2055 2055 HOH HOH . 
N 5 HOH A 56 2056 2056 HOH HOH . 
N 5 HOH A 57 2057 2057 HOH HOH . 
N 5 HOH A 58 2058 2058 HOH HOH . 
N 5 HOH A 59 2059 2059 HOH HOH . 
N 5 HOH A 60 2060 2060 HOH HOH . 
N 5 HOH A 61 2061 2061 HOH HOH . 
N 5 HOH A 62 2062 2062 HOH HOH . 
N 5 HOH A 63 2063 2063 HOH HOH . 
N 5 HOH A 64 2064 2064 HOH HOH . 
N 5 HOH A 65 2065 2065 HOH HOH . 
N 5 HOH A 66 2066 2066 HOH HOH . 
N 5 HOH A 67 2067 2067 HOH HOH . 
N 5 HOH A 68 2068 2068 HOH HOH . 
N 5 HOH A 69 2069 2069 HOH HOH . 
N 5 HOH A 70 2070 2070 HOH HOH . 
N 5 HOH A 71 2071 2071 HOH HOH . 
N 5 HOH A 72 2072 2072 HOH HOH . 
N 5 HOH A 73 2073 2073 HOH HOH . 
N 5 HOH A 74 2074 2074 HOH HOH . 
N 5 HOH A 75 2075 2075 HOH HOH . 
N 5 HOH A 76 2076 2076 HOH HOH . 
N 5 HOH A 77 2077 2077 HOH HOH . 
N 5 HOH A 78 2078 2078 HOH HOH . 
N 5 HOH A 79 2079 2079 HOH HOH . 
N 5 HOH A 80 2080 2080 HOH HOH . 
N 5 HOH A 81 2081 2081 HOH HOH . 
N 5 HOH A 82 2082 2082 HOH HOH . 
N 5 HOH A 83 2083 2083 HOH HOH . 
N 5 HOH A 84 2084 2084 HOH HOH . 
N 5 HOH A 85 2085 2085 HOH HOH . 
N 5 HOH A 86 2086 2086 HOH HOH . 
N 5 HOH A 87 2087 2087 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               33.263 
_atom_site.Cartn_y               46.57 
_atom_site.Cartn_z               46.306 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        83.54 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1471 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              82 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#