data_4BMM
#
_model_server_result.job_id            mqKOZk86x7zqE2BokzFamA 
_model_server_result.datetime_utc      '2024-10-13 13:13:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bmm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1460}' 
#
_entry.id    4BMM 
#
_exptl.entry_id    4BMM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              514.498 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[2,5-bis(fluoranyl)phenyl]-2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]benzamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.65 
_cell.angle_gamma         90 
_cell.entry_id            4BMM 
_cell.length_a            272.469 
_cell.length_b            66.452 
_cell.length_c            122.219 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BMM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,G,H,K,L,N,O,R 1 1 
A,C,E,F,I,J,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 402 A CYS 422 1_555 E FE HEM . A HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc2 E FE HEM . A HEM 1450 1_555 F N1 TU1 . A TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc3 B SG CYS 402 B CYS 422 1_555 G FE HEM . B HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc4 G FE HEM . B HEM 1450 1_555 H N1 TU1 . B TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc5 C SG CYS 402 C CYS 422 1_555 I FE HEM . C HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc6 I FE HEM . C HEM 1450 1_555 J N1 TU1 . C TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc7 D SG CYS 402 D CYS 422 1_555 K FE HEM . D HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc8 K FE HEM . D HEM 1450 1_555 L N1 TU1 . D TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
#
_chem_comp.formula           'C29 H21 F3 N4 O2' 
_chem_comp.formula_weight    514.498 
_chem_comp.id                TU1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[2,5-bis(fluoranyl)phenyl]-2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C6 TU1 doub 416 n n 
C6 N2 TU1 sing 417 n n 
C6 C7 TU1 sing 418 n n 
N2 C5 TU1 sing 419 n n 
C5 C4 TU1 sing 420 n y 
C5 C1 TU1 doub 421 n y 
C4 C3 TU1 doub 422 n y 
C3 N1 TU1 sing 423 n y 
N1 C2 TU1 doub 424 n y 
C2 C1 TU1 sing 425 n y 
C7 C21 TU1 sing 426 n n 
C7 N3 TU1 sing 427 n n 
C21 C22 TU1 sing 428 n n 
C22 C25 TU1 sing 429 n y 
C22 C23 TU1 doub 430 n y 
C25 C26 TU1 sing 431 n y 
C25 C24 TU1 doub 432 n y 
C26 C27 TU1 doub 433 n y 
C27 C28 TU1 sing 434 n y 
C28 C29 TU1 doub 435 n y 
C29 C24 TU1 sing 436 n y 
C24 N4 TU1 sing 437 n y 
N4 C23 TU1 sing 438 n y 
N3 C8 TU1 sing 439 n n 
C8 O1 TU1 doub 440 n n 
C8 C9 TU1 sing 441 n n 
C9 C20 TU1 sing 442 n y 
C9 C10 TU1 doub 443 n y 
C20 F3 TU1 sing 444 n n 
C20 C19 TU1 doub 445 n y 
C19 C12 TU1 sing 446 n y 
C12 C11 TU1 doub 447 n y 
C12 C13 TU1 sing 448 n n 
C11 C10 TU1 sing 449 n y 
C13 C18 TU1 sing 450 n y 
C13 C14 TU1 doub 451 n y 
C18 C17 TU1 doub 452 n y 
C17 F2 TU1 sing 453 n n 
C17 C16 TU1 sing 454 n y 
C16 C15 TU1 doub 455 n y 
C15 C14 TU1 sing 456 n y 
C14 F1 TU1 sing 457 n n 
N2 H2 TU1 sing 458 n n 
C7 H7 TU1 sing 459 n n 
C4 H4 TU1 sing 460 n n 
C1 H1 TU1 sing 461 n n 
C3 H3 TU1 sing 462 n n 
C2 HA TU1 sing 463 n n 
C21 H211 TU1 sing 464 n n 
C21 H212 TU1 sing 465 n n 
N3 HB TU1 sing 466 n n 
C23 H23 TU1 sing 467 n n 
C26 H26 TU1 sing 468 n n 
C27 H27 TU1 sing 469 n n 
C28 H28 TU1 sing 470 n n 
C29 H29 TU1 sing 471 n n 
N4 HC TU1 sing 472 n n 
C10 H10 TU1 sing 473 n n 
C19 H19 TU1 sing 474 n n 
C11 H11 TU1 sing 475 n n 
C18 H18 TU1 sing 476 n n 
C16 H16 TU1 sing 477 n n 
C15 H15 TU1 sing 478 n n 
#
_atom_sites.entry_id                     4BMM 
_atom_sites.fract_transf_matrix[1][1]    0.00367 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001383 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015048 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008744 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 1450 1450 HEM HEM . 
F 3 TU1 A 1 1460 1460 TU1 TU1 . 
G 2 HEM B 1 1450 1450 HEM HEM . 
H 3 TU1 B 1 1460 1460 TU1 TU1 . 
I 2 HEM C 1 1450 1450 HEM HEM . 
J 3 TU1 C 1 1460 1460 TU1 TU1 . 
K 2 HEM D 1 1450 1450 HEM HEM . 
L 3 TU1 D 1 1460 1460 TU1 TU1 . 
M 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH A 2 2002 2002 HOH HOH . 
M 4 HOH A 3 2003 2003 HOH HOH . 
M 4 HOH A 4 2004 2004 HOH HOH . 
M 4 HOH A 5 2005 2005 HOH HOH . 
M 4 HOH A 6 2006 2006 HOH HOH . 
M 4 HOH A 7 2007 2007 HOH HOH . 
M 4 HOH A 8 2008 2008 HOH HOH . 
M 4 HOH A 9 2009 2009 HOH HOH . 
M 4 HOH A 10 2010 2010 HOH HOH . 
M 4 HOH A 11 2011 2011 HOH HOH . 
M 4 HOH A 12 2012 2012 HOH HOH . 
M 4 HOH A 13 2013 2013 HOH HOH . 
N 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH B 2 2002 2002 HOH HOH . 
N 4 HOH B 3 2003 2003 HOH HOH . 
N 4 HOH B 4 2004 2004 HOH HOH . 
N 4 HOH B 5 2005 2005 HOH HOH . 
N 4 HOH B 6 2006 2006 HOH HOH . 
O 4 HOH B 1 2008 2008 HOH HOH . 
P 4 HOH C 1 2001 2001 HOH HOH . 
P 4 HOH C 2 2002 2002 HOH HOH . 
P 4 HOH C 3 2003 2003 HOH HOH . 
P 4 HOH C 4 2004 2004 HOH HOH . 
P 4 HOH C 5 2005 2005 HOH HOH . 
P 4 HOH C 6 2006 2006 HOH HOH . 
P 4 HOH C 7 2007 2007 HOH HOH . 
P 4 HOH C 8 2008 2008 HOH HOH . 
P 4 HOH C 9 2009 2009 HOH HOH . 
Q 4 HOH C 1 3009 3009 HOH HOH . 
Q 4 HOH C 2 3010 3010 HOH HOH . 
R 4 HOH D 1 2001 2001 HOH HOH . 
R 4 HOH D 2 2002 2002 HOH HOH . 
R 4 HOH D 3 2003 2003 HOH HOH . 
R 4 HOH D 4 2004 2004 HOH HOH . 
R 4 HOH D 5 2005 2005 HOH HOH . 
R 4 HOH D 6 2006 2006 HOH HOH . 
R 4 HOH D 7 2007 2007 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 TU1 . . . H 3 -100.797 -47.176 43.18 1 63.23 ? C4 TU1 1460 B 1 
HETATM 2 F F2 TU1 . . . H 3 -105.45 -43.942 30.981 1 83.89 ? F2 TU1 1460 B 1 
HETATM 3 N N1 TU1 . . . H 3 -99.154 -47.956 44.71 1 60.59 ? N1 TU1 1460 B 1 
HETATM 4 O O1 TU1 . . . H 3 -103.687 -49.807 38.32 1 70.22 ? O1 TU1 1460 B 1 
HETATM 5 C C3 TU1 . . . H 3 -99.905 -46.959 44.224 1 61.38 ? C3 TU1 1460 B 1 
HETATM 6 F F3 TU1 . . . H 3 -105.401 -46.218 38.389 1 69.1 ? F3 TU1 1460 B 1 
HETATM 7 N N2 TU1 . . . H 3 -101.917 -48.517 41.714 1 64.34 ? N2 TU1 1460 B 1 
HETATM 8 O O2 TU1 . . . H 3 -102.648 -50.714 41.995 1 68.14 ? O2 TU1 1460 B 1 
HETATM 9 C C2 TU1 . . . H 3 -99.281 -49.2 44.195 1 60.42 ? C2 TU1 1460 B 1 
HETATM 10 C C7 TU1 . . . H 3 -103.998 -49.179 40.791 1 68.3 ? C7 TU1 1460 B 1 
HETATM 11 N N3 TU1 . . . H 3 -103.733 -48.188 39.766 1 66.76 ? N3 TU1 1460 B 1 
HETATM 12 C C1 TU1 . . . H 3 -100.177 -49.481 43.152 1 61.65 ? C1 TU1 1460 B 1 
HETATM 13 N N4 TU1 . . . H 3 -104.485 -45.68 43.782 1 69.94 ? N4 TU1 1460 B 1 
HETATM 14 C C5 TU1 . . . H 3 -100.921 -48.431 42.615 1 61.9 ? C5 TU1 1460 B 1 
HETATM 15 C C6 TU1 . . . H 3 -102.759 -49.561 41.567 1 69.5 ? C6 TU1 1460 B 1 
HETATM 16 C C8 TU1 . . . H 3 -103.669 -48.604 38.532 1 67.82 ? C8 TU1 1460 B 1 
HETATM 17 C C9 TU1 . . . H 3 -103.693 -47.646 37.389 1 67.83 ? C9 TU1 1460 B 1 
HETATM 18 C C10 TU1 . . . H 3 -102.877 -47.909 36.326 1 64.92 ? C10 TU1 1460 B 1 
HETATM 19 C C11 TU1 . . . H 3 -102.891 -47.071 35.225 1 67.4 ? C11 TU1 1460 B 1 
HETATM 20 C C12 TU1 . . . H 3 -103.704 -45.944 35.152 1 67.25 ? C12 TU1 1460 B 1 
HETATM 21 C C13 TU1 . . . H 3 -103.562 -45.202 33.866 1 77.73 ? C13 TU1 1460 B 1 
HETATM 22 C C14 TU1 . . . H 3 -102.195 -44.855 33.383 1 92.13 ? C14 TU1 1460 B 1 
HETATM 23 C C15 TU1 . . . H 3 -102.047 -44.209 32.166 1 85.85 ? C15 TU1 1460 B 1 
HETATM 24 C C16 TU1 . . . H 3 -103.16 -43.921 31.4 1 78.64 ? C16 TU1 1460 B 1 
HETATM 25 C C17 TU1 . . . H 3 -104.437 -44.26 31.814 1 81.5 ? C17 TU1 1460 B 1 
HETATM 26 C C18 TU1 . . . H 3 -104.655 -44.913 33.04 1 81.61 ? C18 TU1 1460 B 1 
HETATM 27 C C19 TU1 . . . H 3 -104.57 -45.635 36.203 1 67.67 ? C19 TU1 1460 B 1 
HETATM 28 C C20 TU1 . . . H 3 -104.593 -46.465 37.335 1 69.02 ? C20 TU1 1460 B 1 
HETATM 29 C C21 TU1 . . . H 3 -105.2 -48.613 41.561 1 71.03 ? C21 TU1 1460 B 1 
HETATM 30 C C22 TU1 . . . H 3 -104.865 -47.572 42.589 1 71.24 ? C22 TU1 1460 B 1 
HETATM 31 C C23 TU1 . . . H 3 -104.903 -46.159 42.564 1 74.9 ? C23 TU1 1460 B 1 
HETATM 32 C C24 TU1 . . . H 3 -104.182 -46.71 44.62 1 66.92 ? C24 TU1 1460 B 1 
HETATM 33 C C29 TU1 . . . H 3 -103.727 -46.827 45.91 1 65.63 ? C29 TU1 1460 B 1 
HETATM 34 C C28 TU1 . . . H 3 -103.519 -48.1 46.446 1 65.57 ? C28 TU1 1460 B 1 
HETATM 35 C C27 TU1 . . . H 3 -103.755 -49.282 45.74 1 64.06 ? C27 TU1 1460 B 1 
HETATM 36 C C26 TU1 . . . H 3 -104.198 -49.222 44.438 1 61.71 ? C26 TU1 1460 B 1 
HETATM 37 C C25 TU1 . . . H 3 -104.412 -47.972 43.909 1 64.3 ? C25 TU1 1460 B 1 
HETATM 38 F F1 TU1 . . . H 3 -101.104 -45.144 34.134 1 107.69 ? F1 TU1 1460 B 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           38 
#