data_4BMM
#
_model_server_result.job_id            JnqNhFp877AC1Ul4S68wsw 
_model_server_result.datetime_utc      '2024-10-13 13:18:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bmm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1460}' 
#
_entry.id    4BMM 
#
_exptl.entry_id    4BMM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              514.498 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[2,5-bis(fluoranyl)phenyl]-2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]benzamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.65 
_cell.angle_gamma         90 
_cell.entry_id            4BMM 
_cell.length_a            272.469 
_cell.length_b            66.452 
_cell.length_c            122.219 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BMM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,G,H,K,L,N,O,R 1 1 
A,C,E,F,I,J,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 402 A CYS 422 1_555 E FE HEM . A HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc2 E FE HEM . A HEM 1450 1_555 F N1 TU1 . A TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc3 B SG CYS 402 B CYS 422 1_555 G FE HEM . B HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc4 G FE HEM . B HEM 1450 1_555 H N1 TU1 . B TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc5 C SG CYS 402 C CYS 422 1_555 I FE HEM . C HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc6 I FE HEM . C HEM 1450 1_555 J N1 TU1 . C TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc7 D SG CYS 402 D CYS 422 1_555 K FE HEM . D HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc8 K FE HEM . D HEM 1450 1_555 L N1 TU1 . D TU1 1460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
#
_chem_comp.formula           'C29 H21 F3 N4 O2' 
_chem_comp.formula_weight    514.498 
_chem_comp.id                TU1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[2,5-bis(fluoranyl)phenyl]-2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C6 TU1 doub 416 n n 
C6 N2 TU1 sing 417 n n 
C6 C7 TU1 sing 418 n n 
N2 C5 TU1 sing 419 n n 
C5 C4 TU1 sing 420 n y 
C5 C1 TU1 doub 421 n y 
C4 C3 TU1 doub 422 n y 
C3 N1 TU1 sing 423 n y 
N1 C2 TU1 doub 424 n y 
C2 C1 TU1 sing 425 n y 
C7 C21 TU1 sing 426 n n 
C7 N3 TU1 sing 427 n n 
C21 C22 TU1 sing 428 n n 
C22 C25 TU1 sing 429 n y 
C22 C23 TU1 doub 430 n y 
C25 C26 TU1 sing 431 n y 
C25 C24 TU1 doub 432 n y 
C26 C27 TU1 doub 433 n y 
C27 C28 TU1 sing 434 n y 
C28 C29 TU1 doub 435 n y 
C29 C24 TU1 sing 436 n y 
C24 N4 TU1 sing 437 n y 
N4 C23 TU1 sing 438 n y 
N3 C8 TU1 sing 439 n n 
C8 O1 TU1 doub 440 n n 
C8 C9 TU1 sing 441 n n 
C9 C20 TU1 sing 442 n y 
C9 C10 TU1 doub 443 n y 
C20 F3 TU1 sing 444 n n 
C20 C19 TU1 doub 445 n y 
C19 C12 TU1 sing 446 n y 
C12 C11 TU1 doub 447 n y 
C12 C13 TU1 sing 448 n n 
C11 C10 TU1 sing 449 n y 
C13 C18 TU1 sing 450 n y 
C13 C14 TU1 doub 451 n y 
C18 C17 TU1 doub 452 n y 
C17 F2 TU1 sing 453 n n 
C17 C16 TU1 sing 454 n y 
C16 C15 TU1 doub 455 n y 
C15 C14 TU1 sing 456 n y 
C14 F1 TU1 sing 457 n n 
N2 H2 TU1 sing 458 n n 
C7 H7 TU1 sing 459 n n 
C4 H4 TU1 sing 460 n n 
C1 H1 TU1 sing 461 n n 
C3 H3 TU1 sing 462 n n 
C2 HA TU1 sing 463 n n 
C21 H211 TU1 sing 464 n n 
C21 H212 TU1 sing 465 n n 
N3 HB TU1 sing 466 n n 
C23 H23 TU1 sing 467 n n 
C26 H26 TU1 sing 468 n n 
C27 H27 TU1 sing 469 n n 
C28 H28 TU1 sing 470 n n 
C29 H29 TU1 sing 471 n n 
N4 HC TU1 sing 472 n n 
C10 H10 TU1 sing 473 n n 
C19 H19 TU1 sing 474 n n 
C11 H11 TU1 sing 475 n n 
C18 H18 TU1 sing 476 n n 
C16 H16 TU1 sing 477 n n 
C15 H15 TU1 sing 478 n n 
#
_atom_sites.entry_id                     4BMM 
_atom_sites.fract_transf_matrix[1][1]    0.00367 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001383 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015048 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008744 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 1450 1450 HEM HEM . 
F 3 TU1 A 1 1460 1460 TU1 TU1 . 
G 2 HEM B 1 1450 1450 HEM HEM . 
H 3 TU1 B 1 1460 1460 TU1 TU1 . 
I 2 HEM C 1 1450 1450 HEM HEM . 
J 3 TU1 C 1 1460 1460 TU1 TU1 . 
K 2 HEM D 1 1450 1450 HEM HEM . 
L 3 TU1 D 1 1460 1460 TU1 TU1 . 
M 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH A 2 2002 2002 HOH HOH . 
M 4 HOH A 3 2003 2003 HOH HOH . 
M 4 HOH A 4 2004 2004 HOH HOH . 
M 4 HOH A 5 2005 2005 HOH HOH . 
M 4 HOH A 6 2006 2006 HOH HOH . 
M 4 HOH A 7 2007 2007 HOH HOH . 
M 4 HOH A 8 2008 2008 HOH HOH . 
M 4 HOH A 9 2009 2009 HOH HOH . 
M 4 HOH A 10 2010 2010 HOH HOH . 
M 4 HOH A 11 2011 2011 HOH HOH . 
M 4 HOH A 12 2012 2012 HOH HOH . 
M 4 HOH A 13 2013 2013 HOH HOH . 
N 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH B 2 2002 2002 HOH HOH . 
N 4 HOH B 3 2003 2003 HOH HOH . 
N 4 HOH B 4 2004 2004 HOH HOH . 
N 4 HOH B 5 2005 2005 HOH HOH . 
N 4 HOH B 6 2006 2006 HOH HOH . 
O 4 HOH B 1 2008 2008 HOH HOH . 
P 4 HOH C 1 2001 2001 HOH HOH . 
P 4 HOH C 2 2002 2002 HOH HOH . 
P 4 HOH C 3 2003 2003 HOH HOH . 
P 4 HOH C 4 2004 2004 HOH HOH . 
P 4 HOH C 5 2005 2005 HOH HOH . 
P 4 HOH C 6 2006 2006 HOH HOH . 
P 4 HOH C 7 2007 2007 HOH HOH . 
P 4 HOH C 8 2008 2008 HOH HOH . 
P 4 HOH C 9 2009 2009 HOH HOH . 
Q 4 HOH C 1 3009 3009 HOH HOH . 
Q 4 HOH C 2 3010 3010 HOH HOH . 
R 4 HOH D 1 2001 2001 HOH HOH . 
R 4 HOH D 2 2002 2002 HOH HOH . 
R 4 HOH D 3 2003 2003 HOH HOH . 
R 4 HOH D 4 2004 2004 HOH HOH . 
R 4 HOH D 5 2005 2005 HOH HOH . 
R 4 HOH D 6 2006 2006 HOH HOH . 
R 4 HOH D 7 2007 2007 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 TU1 . . . L 3 -122.844 -63.189 15.069 1 53.15 ? C4 TU1 1460 D 1 
HETATM 2 F F2 TU1 . . . L 3 -126.503 -53.668 22.211 1 82.83 ? F2 TU1 1460 D 1 
HETATM 3 N N1 TU1 . . . L 3 -123.707 -65.174 14.107 1 52.74 ? N1 TU1 1460 D 1 
HETATM 4 O O1 TU1 . . . L 3 -121.621 -61.143 20.867 1 56.41 ? O1 TU1 1460 D 1 
HETATM 5 C C3 TU1 . . . L 3 -123.364 -63.881 14.002 1 52.65 ? C3 TU1 1460 D 1 
HETATM 6 F F3 TU1 . . . L 3 -120.35 -58.204 18.991 1 60.92 ? F3 TU1 1460 D 1 
HETATM 7 N N2 TU1 . . . L 3 -122.107 -63.071 17.237 1 54.11 ? N2 TU1 1460 D 1 
HETATM 8 O O2 TU1 . . . L 3 -121.263 -64.634 18.69 1 51.83 ? O2 TU1 1460 D 1 
HETATM 9 C C2 TU1 . . . L 3 -123.563 -65.823 15.274 1 52.84 ? C2 TU1 1460 D 1 
HETATM 10 C C7 TU1 . . . L 3 -120.421 -62.428 18.825 1 54.14 ? C7 TU1 1460 D 1 
HETATM 11 N N3 TU1 . . . L 3 -120.998 -61.085 18.753 1 53.22 ? N3 TU1 1460 D 1 
HETATM 12 C C1 TU1 . . . L 3 -123.038 -65.169 16.394 1 53.97 ? C1 TU1 1460 D 1 
HETATM 13 N N4 TU1 . . . L 3 -119.016 -61.165 14.747 1 55.54 ? N4 TU1 1460 D 1 
HETATM 14 C C5 TU1 . . . L 3 -122.697 -63.823 16.288 1 53.68 ? C5 TU1 1460 D 1 
HETATM 15 C C6 TU1 . . . L 3 -121.335 -63.497 18.252 1 53.65 ? C6 TU1 1460 D 1 
HETATM 16 C C8 TU1 . . . L 3 -121.614 -60.57 19.803 1 55.38 ? C8 TU1 1460 D 1 
HETATM 17 C C9 TU1 . . . L 3 -122.33 -59.264 19.8 1 56.92 ? C9 TU1 1460 D 1 
HETATM 18 C C10 TU1 . . . L 3 -123.642 -59.15 20.23 1 59.16 ? C10 TU1 1460 D 1 
HETATM 19 C C11 TU1 . . . L 3 -124.275 -57.905 20.246 1 60.55 ? C11 TU1 1460 D 1 
HETATM 20 C C12 TU1 . . . L 3 -123.613 -56.746 19.841 1 60.54 ? C12 TU1 1460 D 1 
HETATM 21 C C13 TU1 . . . L 3 -124.34 -55.439 19.878 1 65.49 ? C13 TU1 1460 D 1 
HETATM 22 C C14 TU1 . . . L 3 -124.316 -54.416 18.775 1 65.45 ? C14 TU1 1460 D 1 
HETATM 23 C C15 TU1 . . . L 3 -125.031 -53.236 18.94 1 63.07 ? C15 TU1 1460 D 1 
HETATM 24 C C16 TU1 . . . L 3 -125.754 -53.013 20.095 1 65.56 ? C16 TU1 1460 D 1 
HETATM 25 C C17 TU1 . . . L 3 -125.781 -53.946 21.113 1 72.36 ? C17 TU1 1460 D 1 
HETATM 26 C C18 TU1 . . . L 3 -125.084 -55.146 21.012 1 67.34 ? C18 TU1 1460 D 1 
HETATM 27 C C19 TU1 . . . L 3 -122.287 -56.823 19.417 1 59.31 ? C19 TU1 1460 D 1 
HETATM 28 C C20 TU1 . . . L 3 -121.623 -58.051 19.39 1 58.8 ? C20 TU1 1460 D 1 
HETATM 29 C C21 TU1 . . . L 3 -119.016 -62.497 18.2 1 54.42 ? C21 TU1 1460 D 1 
HETATM 30 C C22 TU1 . . . L 3 -119.007 -62.249 16.708 1 53.72 ? C22 TU1 1460 D 1 
HETATM 31 C C23 TU1 . . . L 3 -118.993 -61.016 16.101 1 54.7 ? C23 TU1 1460 D 1 
HETATM 32 C C24 TU1 . . . L 3 -119.036 -62.43 14.373 1 54.49 ? C24 TU1 1460 D 1 
HETATM 33 C C29 TU1 . . . L 3 -119.068 -63.044 13.135 1 53.88 ? C29 TU1 1460 D 1 
HETATM 34 C C28 TU1 . . . L 3 -119.091 -64.433 13.088 1 54.7 ? C28 TU1 1460 D 1 
HETATM 35 C C27 TU1 . . . L 3 -119.089 -65.198 14.255 1 55.85 ? C27 TU1 1460 D 1 
HETATM 36 C C26 TU1 . . . L 3 -119.059 -64.617 15.526 1 57.33 ? C26 TU1 1460 D 1 
HETATM 37 C C25 TU1 . . . L 3 -119.029 -63.231 15.601 1 55.41 ? C25 TU1 1460 D 1 
HETATM 38 F F1 TU1 . . . L 3 -123.636 -54.583 17.617 1 67.15 ? F1 TU1 1460 D 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           53 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           542 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           38 
#