data_4BNT # _model_server_result.job_id vziXRWghWFV2tWeMYiV1Rw _model_server_result.datetime_utc '2024-11-23 00:17:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bnt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1248}' # _entry.id 4BNT # _exptl.entry_id 4BNT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.134 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(trifluoromethyl)-1H-benzimidazole _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BNT _cell.length_a 54.18 _cell.length_b 109.152 _cell.length_c 145.194 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BNT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C8 H5 F3 N2' _chem_comp.formula_weight 186.134 _chem_comp.id 36E _chem_comp.mon_nstd_flag . _chem_comp.name 2-(trifluoromethyl)-1H-benzimidazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAB 36E doub 1 n y CAA CAD 36E sing 2 n y CAB CAG 36E sing 3 n y FAC CAI 36E sing 4 n n CAD CAE 36E doub 5 n y CAE CAF 36E sing 6 n y CAF CAG 36E doub 7 n y CAF NAK 36E sing 8 n y CAG NAL 36E sing 9 n y FAH CAI 36E sing 10 n n CAI CAJ 36E sing 11 n n CAI FAM 36E sing 12 n n CAJ NAK 36E sing 13 n y CAJ NAL 36E doub 14 n y CAA HAA 36E sing 15 n n CAB HAB 36E sing 16 n n CAD HAD 36E sing 17 n n CAE HAE 36E sing 18 n n NAK HNAK 36E sing 19 n n # _atom_sites.entry_id 4BNT _atom_sites.fract_transf_matrix[1][1] 0.018457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006887 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 36E B 1 1248 1248 36E 36E . F 2 36E C 1 1248 1248 36E 36E . G 3 HOH A 1 2001 2001 HOH HOH . G 3 HOH A 2 2002 2002 HOH HOH . G 3 HOH A 3 2003 2003 HOH HOH . G 3 HOH A 4 2004 2004 HOH HOH . G 3 HOH A 5 2005 2005 HOH HOH . G 3 HOH A 6 2006 2006 HOH HOH . G 3 HOH A 7 2007 2007 HOH HOH . G 3 HOH A 8 2008 2008 HOH HOH . G 3 HOH A 9 2009 2009 HOH HOH . G 3 HOH A 10 2010 2010 HOH HOH . G 3 HOH A 11 2011 2011 HOH HOH . G 3 HOH A 12 2012 2012 HOH HOH . G 3 HOH A 13 2013 2013 HOH HOH . G 3 HOH A 14 2014 2014 HOH HOH . G 3 HOH A 15 2015 2015 HOH HOH . G 3 HOH A 16 2016 2016 HOH HOH . G 3 HOH A 17 2017 2017 HOH HOH . G 3 HOH A 18 2018 2018 HOH HOH . G 3 HOH A 19 2019 2019 HOH HOH . G 3 HOH A 20 2020 2020 HOH HOH . G 3 HOH A 21 2021 2021 HOH HOH . G 3 HOH A 22 2022 2022 HOH HOH . G 3 HOH A 23 2023 2023 HOH HOH . G 3 HOH A 24 2024 2024 HOH HOH . G 3 HOH A 25 2025 2025 HOH HOH . G 3 HOH A 26 2026 2026 HOH HOH . G 3 HOH A 27 2027 2027 HOH HOH . G 3 HOH A 28 2028 2028 HOH HOH . G 3 HOH A 29 2029 2029 HOH HOH . G 3 HOH A 30 2030 2030 HOH HOH . G 3 HOH A 31 2031 2031 HOH HOH . G 3 HOH A 32 2032 2032 HOH HOH . G 3 HOH A 33 2033 2033 HOH HOH . G 3 HOH A 34 2034 2034 HOH HOH . G 3 HOH A 35 2035 2035 HOH HOH . G 3 HOH A 36 2036 2036 HOH HOH . H 3 HOH B 1 2001 2001 HOH HOH . H 3 HOH B 2 2002 2002 HOH HOH . H 3 HOH B 3 2003 2003 HOH HOH . H 3 HOH B 4 2004 2004 HOH HOH . H 3 HOH B 5 2005 2005 HOH HOH . H 3 HOH B 6 2006 2006 HOH HOH . H 3 HOH B 7 2007 2007 HOH HOH . H 3 HOH B 8 2008 2008 HOH HOH . H 3 HOH B 9 2009 2009 HOH HOH . H 3 HOH B 10 2010 2010 HOH HOH . H 3 HOH B 11 2011 2011 HOH HOH . H 3 HOH B 12 2012 2012 HOH HOH . H 3 HOH B 13 2013 2013 HOH HOH . H 3 HOH B 14 2014 2014 HOH HOH . H 3 HOH B 15 2015 2015 HOH HOH . H 3 HOH B 16 2016 2016 HOH HOH . H 3 HOH B 17 2017 2017 HOH HOH . H 3 HOH B 18 2018 2018 HOH HOH . H 3 HOH B 19 2019 2019 HOH HOH . H 3 HOH B 20 2020 2020 HOH HOH . H 3 HOH B 21 2021 2021 HOH HOH . H 3 HOH B 22 2022 2022 HOH HOH . H 3 HOH B 23 2023 2023 HOH HOH . H 3 HOH B 24 2024 2024 HOH HOH . H 3 HOH B 25 2025 2025 HOH HOH . H 3 HOH B 26 2026 2026 HOH HOH . I 3 HOH C 1 2001 2001 HOH HOH . I 3 HOH C 2 2002 2002 HOH HOH . I 3 HOH C 3 2003 2003 HOH HOH . I 3 HOH C 4 2004 2004 HOH HOH . I 3 HOH C 5 2005 2005 HOH HOH . I 3 HOH C 6 2006 2006 HOH HOH . I 3 HOH C 7 2007 2007 HOH HOH . I 3 HOH C 8 2008 2008 HOH HOH . I 3 HOH C 9 2009 2009 HOH HOH . I 3 HOH C 10 2010 2010 HOH HOH . I 3 HOH C 11 2011 2011 HOH HOH . I 3 HOH C 12 2012 2012 HOH HOH . I 3 HOH C 13 2013 2013 HOH HOH . I 3 HOH C 14 2014 2014 HOH HOH . I 3 HOH C 15 2015 2015 HOH HOH . I 3 HOH C 16 2016 2016 HOH HOH . I 3 HOH C 17 2017 2017 HOH HOH . I 3 HOH C 18 2018 2018 HOH HOH . I 3 HOH C 19 2019 2019 HOH HOH . I 3 HOH C 20 2020 2020 HOH HOH . I 3 HOH C 21 2021 2021 HOH HOH . I 3 HOH C 22 2022 2022 HOH HOH . I 3 HOH C 23 2023 2023 HOH HOH . I 3 HOH C 24 2024 2024 HOH HOH . I 3 HOH C 25 2025 2025 HOH HOH . I 3 HOH C 26 2026 2026 HOH HOH . I 3 HOH C 27 2027 2027 HOH HOH . J 3 HOH D 1 2001 2001 HOH HOH . J 3 HOH D 2 2002 2002 HOH HOH . J 3 HOH D 3 2003 2003 HOH HOH . J 3 HOH D 4 2004 2004 HOH HOH . J 3 HOH D 5 2005 2005 HOH HOH . J 3 HOH D 6 2006 2006 HOH HOH . J 3 HOH D 7 2007 2007 HOH HOH . J 3 HOH D 8 2008 2008 HOH HOH . J 3 HOH D 9 2009 2009 HOH HOH . J 3 HOH D 10 2010 2010 HOH HOH . J 3 HOH D 11 2011 2011 HOH HOH . J 3 HOH D 12 2012 2012 HOH HOH . J 3 HOH D 13 2013 2013 HOH HOH . J 3 HOH D 14 2014 2014 HOH HOH . J 3 HOH D 15 2015 2015 HOH HOH . J 3 HOH D 16 2016 2016 HOH HOH . J 3 HOH D 17 2017 2017 HOH HOH . J 3 HOH D 18 2018 2018 HOH HOH . J 3 HOH D 19 2019 2019 HOH HOH . J 3 HOH D 20 2020 2020 HOH HOH . J 3 HOH D 21 2021 2021 HOH HOH . J 3 HOH D 22 2022 2022 HOH HOH . J 3 HOH D 23 2023 2023 HOH HOH . J 3 HOH D 24 2024 2024 HOH HOH . J 3 HOH D 25 2025 2025 HOH HOH . J 3 HOH D 26 2026 2026 HOH HOH . J 3 HOH D 27 2027 2027 HOH HOH . J 3 HOH D 28 2028 2028 HOH HOH . J 3 HOH D 29 2029 2029 HOH HOH . J 3 HOH D 30 2030 2030 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 36E . A . F 2 -26.734 -22.337 -39.682 0.5 43.28 ? CAA 36E 1248 C 1 HETATM 2 C CAA 36E . B . F 2 -30.526 -17.762 -36.776 0.5 38.76 ? CAA 36E 1248 C 1 HETATM 3 C CAB 36E . A . F 2 -28.06 -22.29 -39.224 0.5 41.66 ? CAB 36E 1248 C 1 HETATM 4 C CAB 36E . B . F 2 -30.74 -19.062 -37.238 0.5 38.69 ? CAB 36E 1248 C 1 HETATM 5 F FAC 36E . A . F 2 -31.052 -19.416 -35.914 0.5 47.79 ? FAC 36E 1248 C 1 HETATM 6 F FAC 36E . B . F 2 -28.681 -22.569 -40.52 0.5 42.2 ? FAC 36E 1248 C 1 HETATM 7 C CAD 36E . A . F 2 -25.936 -21.203 -39.548 0.5 40.2 ? CAD 36E 1248 C 1 HETATM 8 C CAD 36E . B . F 2 -29.244 -17.216 -36.888 0.5 37.19 ? CAD 36E 1248 C 1 HETATM 9 C CAE 36E . A . F 2 -26.5 -20.071 -38.963 0.5 37.33 ? CAE 36E 1248 C 1 HETATM 10 C CAE 36E . B . F 2 -28.233 -17.97 -37.456 0.5 33.78 ? CAE 36E 1248 C 1 HETATM 11 C CAF 36E . A . F 2 -27.778 -20.08 -38.547 0.5 37.65 ? CAF 36E 1248 C 1 HETATM 12 C CAF 36E . B . F 2 -28.493 -19.208 -37.891 0.5 35.71 ? CAF 36E 1248 C 1 HETATM 13 C CAG 36E . A . F 2 -28.548 -21.174 -38.678 0.5 40.23 ? CAG 36E 1248 C 1 HETATM 14 C CAG 36E . B . F 2 -29.733 -19.737 -37.777 0.5 36.67 ? CAG 36E 1248 C 1 HETATM 15 F FAH 36E . A . F 2 -32.182 -19.187 -37.836 0.5 44.74 ? FAH 36E 1248 C 1 HETATM 16 F FAH 36E . B . F 2 -28.609 -23.461 -38.585 0.5 39.31 ? FAH 36E 1248 C 1 HETATM 17 C CAI 36E . A . F 2 -30.971 -18.93 -37.115 0.5 45.18 ? CAI 36E 1248 C 1 HETATM 18 C CAI 36E . B . F 2 -28.084 -22.52 -39.322 0.5 41.65 ? CAI 36E 1248 C 1 HETATM 19 C CAJ 36E . A . F 2 -29.76 -19.639 -37.777 0.5 41.28 ? CAJ 36E 1248 C 1 HETATM 20 C CAJ 36E . B . F 2 -28.463 -21.191 -38.675 0.5 38.61 ? CAJ 36E 1248 C 1 HETATM 21 N NAK 36E . A . F 2 -28.54 -19.124 -37.983 0.5 38.87 ? NAK 36E 1248 C 1 HETATM 22 N NAK 36E . B . F 2 -27.69 -20.131 -38.453 0.5 34.21 ? NAK 36E 1248 C 1 HETATM 23 N NAL 36E . A . F 2 -29.778 -20.893 -38.201 0.5 41.32 ? NAL 36E 1248 C 1 HETATM 24 N NAL 36E . B . F 2 -29.712 -20.958 -38.278 0.5 39.08 ? NAL 36E 1248 C 1 HETATM 25 F FAM 36E . A . F 2 -30.779 -17.52 -37.019 0.5 45.75 ? FAM 36E 1248 C 1 HETATM 26 F FAM 36E . B . F 2 -26.515 -22.664 -39.474 0.5 47.06 ? FAM 36E 1248 C 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #