data_4BO2 # _model_server_result.job_id g8npdiWSJ4VvE3c-B4GrCg _model_server_result.datetime_utc '2024-11-23 06:26:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bo2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1248}' # _entry.id 4BO2 # _exptl.entry_id 4BO2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 310.35 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(1-ethylbenzimidazol-2-yl)-3-(2-methoxyphenyl)urea _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BO2 _cell.length_a 58.55 _cell.length_b 108.92 _cell.length_c 149.72 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BO2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C17 H18 N4 O2' _chem_comp.formula_weight 310.35 _chem_comp.id 36K _chem_comp.mon_nstd_flag . _chem_comp.name 1-(1-ethylbenzimidazol-2-yl)-3-(2-methoxyphenyl)urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAF CAE 36K sing 1 n n CAE NAD 36K sing 2 n n NAD CAC 36K sing 3 n y NAD CAM 36K sing 4 n y CAC CAB 36K sing 5 n y CAC CAK 36K doub 6 n y CAB CAA 36K doub 7 n y CAA CAI 36K sing 8 n y CAI CAJ 36K doub 9 n y CAJ CAK 36K sing 10 n y CAK NAL 36K sing 11 n y NAL CAM 36K doub 12 n y CAM NAN 36K sing 13 n n NAN CAO 36K sing 14 n n CAO OAT 36K doub 15 n n CAO NAP 36K sing 16 n n NAP CAQ 36K sing 17 n n CAQ CAU 36K sing 18 n y CAQ CAR 36K doub 19 n y CAU CAV 36K doub 20 n y CAV CAW 36K sing 21 n y CAW CAS 36K doub 22 n y CAS CAR 36K sing 23 n y CAR OAG 36K sing 24 n n OAG CAH 36K sing 25 n n CAF HAF1 36K sing 26 n n CAF HAF2 36K sing 27 n n CAF HAF3 36K sing 28 n n CAE HAE1 36K sing 29 n n CAE HAE2 36K sing 30 n n CAB HAB 36K sing 31 n n CAA HAA 36K sing 32 n n CAI HAI 36K sing 33 n n CAJ HAJ 36K sing 34 n n NAN HAN 36K sing 35 n n NAP HAP 36K sing 36 n n CAU HAU 36K sing 37 n n CAV HAV 36K sing 38 n n CAW HAW 36K sing 39 n n CAS HAS 36K sing 40 n n CAH HAH1 36K sing 41 n n CAH HAH2 36K sing 42 n n CAH HAH3 36K sing 43 n n # _atom_sites.entry_id 4BO2 _atom_sites.fract_transf_matrix[1][1] 0.017079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009181 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 36K A 1 1248 1248 36K 36K . F 2 36K C 1 1248 1248 36K 36K . G 3 HOH A 1 2001 2001 HOH HOH . G 3 HOH A 2 2002 2002 HOH HOH . G 3 HOH A 3 2003 2003 HOH HOH . G 3 HOH A 4 2004 2004 HOH HOH . G 3 HOH A 5 2005 2005 HOH HOH . G 3 HOH A 6 2006 2006 HOH HOH . G 3 HOH A 7 2007 2007 HOH HOH . G 3 HOH A 8 2008 2008 HOH HOH . G 3 HOH A 9 2009 2009 HOH HOH . G 3 HOH A 10 2010 2010 HOH HOH . G 3 HOH A 11 2011 2011 HOH HOH . G 3 HOH A 12 2012 2012 HOH HOH . G 3 HOH A 13 2013 2013 HOH HOH . G 3 HOH A 14 2014 2014 HOH HOH . G 3 HOH A 15 2015 2015 HOH HOH . G 3 HOH A 16 2016 2016 HOH HOH . G 3 HOH A 17 2017 2017 HOH HOH . G 3 HOH A 18 2018 2018 HOH HOH . G 3 HOH A 19 2019 2019 HOH HOH . G 3 HOH A 20 2020 2020 HOH HOH . G 3 HOH A 21 2021 2021 HOH HOH . G 3 HOH A 22 2022 2022 HOH HOH . G 3 HOH A 23 2023 2023 HOH HOH . G 3 HOH A 24 2024 2024 HOH HOH . G 3 HOH A 25 2025 2025 HOH HOH . G 3 HOH A 26 2026 2026 HOH HOH . G 3 HOH A 27 2027 2027 HOH HOH . G 3 HOH A 28 2028 2028 HOH HOH . G 3 HOH A 29 2029 2029 HOH HOH . G 3 HOH A 30 2030 2030 HOH HOH . G 3 HOH A 31 2031 2031 HOH HOH . G 3 HOH A 32 2032 2032 HOH HOH . G 3 HOH A 33 2033 2033 HOH HOH . G 3 HOH A 34 2034 2034 HOH HOH . G 3 HOH A 35 2035 2035 HOH HOH . G 3 HOH A 36 2036 2036 HOH HOH . G 3 HOH A 37 2037 2037 HOH HOH . G 3 HOH A 38 2038 2038 HOH HOH . G 3 HOH A 39 2039 2039 HOH HOH . G 3 HOH A 40 2040 2040 HOH HOH . G 3 HOH A 41 2041 2041 HOH HOH . G 3 HOH A 42 2042 2042 HOH HOH . G 3 HOH A 43 2043 2043 HOH HOH . G 3 HOH A 44 2044 2044 HOH HOH . G 3 HOH A 45 2045 2045 HOH HOH . G 3 HOH A 46 2046 2046 HOH HOH . G 3 HOH A 47 2047 2047 HOH HOH . G 3 HOH A 48 2048 2048 HOH HOH . G 3 HOH A 49 2049 2049 HOH HOH . G 3 HOH A 50 2050 2050 HOH HOH . G 3 HOH A 51 2051 2051 HOH HOH . G 3 HOH A 52 2052 2052 HOH HOH . G 3 HOH A 53 2053 2053 HOH HOH . G 3 HOH A 54 2054 2054 HOH HOH . G 3 HOH A 55 2055 2055 HOH HOH . H 3 HOH B 1 2001 2001 HOH HOH . H 3 HOH B 2 2002 2002 HOH HOH . H 3 HOH B 3 2003 2003 HOH HOH . H 3 HOH B 4 2004 2004 HOH HOH . H 3 HOH B 5 2005 2005 HOH HOH . H 3 HOH B 6 2006 2006 HOH HOH . H 3 HOH B 7 2007 2007 HOH HOH . H 3 HOH B 8 2008 2008 HOH HOH . H 3 HOH B 9 2009 2009 HOH HOH . H 3 HOH B 10 2010 2010 HOH HOH . H 3 HOH B 11 2011 2011 HOH HOH . H 3 HOH B 12 2012 2012 HOH HOH . H 3 HOH B 13 2013 2013 HOH HOH . H 3 HOH B 14 2014 2014 HOH HOH . H 3 HOH B 15 2015 2015 HOH HOH . H 3 HOH B 16 2016 2016 HOH HOH . H 3 HOH B 17 2017 2017 HOH HOH . H 3 HOH B 18 2018 2018 HOH HOH . H 3 HOH B 19 2019 2019 HOH HOH . H 3 HOH B 20 2020 2020 HOH HOH . H 3 HOH B 21 2021 2021 HOH HOH . H 3 HOH B 22 2022 2022 HOH HOH . H 3 HOH B 23 2023 2023 HOH HOH . H 3 HOH B 24 2024 2024 HOH HOH . H 3 HOH B 25 2025 2025 HOH HOH . H 3 HOH B 26 2026 2026 HOH HOH . H 3 HOH B 27 2027 2027 HOH HOH . H 3 HOH B 28 2028 2028 HOH HOH . H 3 HOH B 29 2029 2029 HOH HOH . H 3 HOH B 30 2030 2030 HOH HOH . H 3 HOH B 31 2031 2031 HOH HOH . H 3 HOH B 32 2032 2032 HOH HOH . H 3 HOH B 33 2033 2033 HOH HOH . H 3 HOH B 34 2034 2034 HOH HOH . H 3 HOH B 35 2035 2035 HOH HOH . H 3 HOH B 36 2036 2036 HOH HOH . H 3 HOH B 37 2037 2037 HOH HOH . H 3 HOH B 38 2038 2038 HOH HOH . H 3 HOH B 39 2039 2039 HOH HOH . H 3 HOH B 40 2040 2040 HOH HOH . H 3 HOH B 41 2041 2041 HOH HOH . H 3 HOH B 42 2042 2042 HOH HOH . H 3 HOH B 43 2043 2043 HOH HOH . H 3 HOH B 44 2044 2044 HOH HOH . H 3 HOH B 45 2045 2045 HOH HOH . H 3 HOH B 46 2046 2046 HOH HOH . H 3 HOH B 47 2047 2047 HOH HOH . H 3 HOH B 48 2048 2048 HOH HOH . I 3 HOH C 1 2001 2001 HOH HOH . I 3 HOH C 2 2002 2002 HOH HOH . I 3 HOH C 3 2003 2003 HOH HOH . I 3 HOH C 4 2004 2004 HOH HOH . I 3 HOH C 5 2005 2005 HOH HOH . I 3 HOH C 6 2006 2006 HOH HOH . I 3 HOH C 7 2007 2007 HOH HOH . I 3 HOH C 8 2008 2008 HOH HOH . I 3 HOH C 9 2009 2009 HOH HOH . I 3 HOH C 10 2010 2010 HOH HOH . I 3 HOH C 11 2011 2011 HOH HOH . I 3 HOH C 12 2012 2012 HOH HOH . I 3 HOH C 13 2013 2013 HOH HOH . I 3 HOH C 14 2014 2014 HOH HOH . I 3 HOH C 15 2015 2015 HOH HOH . I 3 HOH C 16 2016 2016 HOH HOH . I 3 HOH C 17 2017 2017 HOH HOH . I 3 HOH C 18 2018 2018 HOH HOH . I 3 HOH C 19 2019 2019 HOH HOH . I 3 HOH C 20 2020 2020 HOH HOH . I 3 HOH C 21 2021 2021 HOH HOH . I 3 HOH C 22 2022 2022 HOH HOH . I 3 HOH C 23 2023 2023 HOH HOH . I 3 HOH C 24 2024 2024 HOH HOH . I 3 HOH C 25 2025 2025 HOH HOH . I 3 HOH C 26 2026 2026 HOH HOH . I 3 HOH C 27 2027 2027 HOH HOH . I 3 HOH C 28 2028 2028 HOH HOH . I 3 HOH C 29 2029 2029 HOH HOH . I 3 HOH C 30 2030 2030 HOH HOH . I 3 HOH C 31 2031 2031 HOH HOH . I 3 HOH C 32 2032 2032 HOH HOH . I 3 HOH C 33 2033 2033 HOH HOH . I 3 HOH C 34 2034 2034 HOH HOH . I 3 HOH C 35 2035 2035 HOH HOH . I 3 HOH C 36 2036 2036 HOH HOH . I 3 HOH C 37 2037 2037 HOH HOH . I 3 HOH C 38 2038 2038 HOH HOH . I 3 HOH C 39 2039 2039 HOH HOH . I 3 HOH C 40 2040 2040 HOH HOH . I 3 HOH C 41 2041 2041 HOH HOH . I 3 HOH C 42 2042 2042 HOH HOH . I 3 HOH C 43 2043 2043 HOH HOH . J 3 HOH D 1 2001 2001 HOH HOH . J 3 HOH D 2 2002 2002 HOH HOH . J 3 HOH D 3 2003 2003 HOH HOH . J 3 HOH D 4 2004 2004 HOH HOH . J 3 HOH D 5 2005 2005 HOH HOH . J 3 HOH D 6 2006 2006 HOH HOH . J 3 HOH D 7 2007 2007 HOH HOH . J 3 HOH D 8 2008 2008 HOH HOH . J 3 HOH D 9 2009 2009 HOH HOH . J 3 HOH D 10 2010 2010 HOH HOH . J 3 HOH D 11 2011 2011 HOH HOH . J 3 HOH D 12 2012 2012 HOH HOH . J 3 HOH D 13 2013 2013 HOH HOH . J 3 HOH D 14 2014 2014 HOH HOH . J 3 HOH D 15 2015 2015 HOH HOH . J 3 HOH D 16 2016 2016 HOH HOH . J 3 HOH D 17 2017 2017 HOH HOH . J 3 HOH D 18 2018 2018 HOH HOH . J 3 HOH D 19 2019 2019 HOH HOH . J 3 HOH D 20 2020 2020 HOH HOH . J 3 HOH D 21 2021 2021 HOH HOH . J 3 HOH D 22 2022 2022 HOH HOH . J 3 HOH D 23 2023 2023 HOH HOH . J 3 HOH D 24 2024 2024 HOH HOH . J 3 HOH D 25 2025 2025 HOH HOH . J 3 HOH D 26 2026 2026 HOH HOH . J 3 HOH D 27 2027 2027 HOH HOH . J 3 HOH D 28 2028 2028 HOH HOH . J 3 HOH D 29 2029 2029 HOH HOH . J 3 HOH D 30 2030 2030 HOH HOH . J 3 HOH D 31 2031 2031 HOH HOH . J 3 HOH D 32 2032 2032 HOH HOH . J 3 HOH D 33 2033 2033 HOH HOH . J 3 HOH D 34 2034 2034 HOH HOH . J 3 HOH D 35 2035 2035 HOH HOH . J 3 HOH D 36 2036 2036 HOH HOH . J 3 HOH D 37 2037 2037 HOH HOH . J 3 HOH D 38 2038 2038 HOH HOH . J 3 HOH D 39 2039 2039 HOH HOH . J 3 HOH D 40 2040 2040 HOH HOH . J 3 HOH D 41 2041 2041 HOH HOH . J 3 HOH D 42 2042 2042 HOH HOH . J 3 HOH D 43 2043 2043 HOH HOH . J 3 HOH D 44 2044 2044 HOH HOH . J 3 HOH D 45 2045 2045 HOH HOH . J 3 HOH D 46 2046 2046 HOH HOH . J 3 HOH D 47 2047 2047 HOH HOH . J 3 HOH D 48 2048 2048 HOH HOH . J 3 HOH D 49 2049 2049 HOH HOH . J 3 HOH D 50 2050 2050 HOH HOH . J 3 HOH D 51 2051 2051 HOH HOH . J 3 HOH D 52 2052 2052 HOH HOH . J 3 HOH D 53 2053 2053 HOH HOH . J 3 HOH D 54 2054 2054 HOH HOH . J 3 HOH D 55 2055 2055 HOH HOH . J 3 HOH D 56 2056 2056 HOH HOH . J 3 HOH D 57 2057 2057 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAF 36K . . . F 2 29.589 133.356 183.713 1 25.53 ? CAF 36K 1248 C 1 HETATM 2 C CAE 36K . . . F 2 29.833 132.271 182.659 1 26.29 ? CAE 36K 1248 C 1 HETATM 3 N NAD 36K . . . F 2 29.468 131.002 183.279 1 26.79 ? NAD 36K 1248 C 1 HETATM 4 C CAC 36K . . . F 2 28.16 130.619 183.146 1 21.88 ? CAC 36K 1248 C 1 HETATM 5 C CAB 36K . . . F 2 27.151 131.242 182.474 1 21.82 ? CAB 36K 1248 C 1 HETATM 6 C CAA 36K . . . F 2 25.89 130.629 182.466 1 20.24 ? CAA 36K 1248 C 1 HETATM 7 C CAI 36K . . . F 2 25.788 129.399 183.117 1 20.45 ? CAI 36K 1248 C 1 HETATM 8 C CAJ 36K . . . F 2 26.908 128.799 183.769 1 22.03 ? CAJ 36K 1248 C 1 HETATM 9 C CAK 36K . . . F 2 28.059 129.428 183.77 1 19.63 ? CAK 36K 1248 C 1 HETATM 10 N NAL 36K . . . F 2 29.285 129.057 184.249 1 25.32 ? NAL 36K 1248 C 1 HETATM 11 C CAM 36K . . . F 2 30.148 130.047 183.927 1 24.65 ? CAM 36K 1248 C 1 HETATM 12 N NAN 36K . . . F 2 31.465 130.168 184.259 1 31.5 ? NAN 36K 1248 C 1 HETATM 13 C CAO 36K . . . F 2 32.119 129.21 184.932 1 31.82 ? CAO 36K 1248 C 1 HETATM 14 O OAT 36K . . . F 2 33.259 129.51 185.292 1 36.38 ? OAT 36K 1248 C 1 HETATM 15 N NAP 36K . . . F 2 31.437 128.01 185.285 1 28.39 ? NAP 36K 1248 C 1 HETATM 16 C CAQ 36K . . . F 2 31.98 127.008 185.994 1 27.11 ? CAQ 36K 1248 C 1 HETATM 17 C CAU 36K . . . F 2 33.265 126.983 186.543 1 27.55 ? CAU 36K 1248 C 1 HETATM 18 C CAV 36K . . . F 2 33.707 125.856 187.26 1 25.96 ? CAV 36K 1248 C 1 HETATM 19 C CAW 36K . . . F 2 32.897 124.759 187.397 1 26.81 ? CAW 36K 1248 C 1 HETATM 20 C CAS 36K . . . F 2 31.638 124.75 186.824 1 28.76 ? CAS 36K 1248 C 1 HETATM 21 C CAR 36K . . . F 2 31.181 125.874 186.146 1 29.13 ? CAR 36K 1248 C 1 HETATM 22 O OAG 36K . . . F 2 29.964 125.975 185.576 1 31.2 ? OAG 36K 1248 C 1 HETATM 23 C CAH 36K . . . F 2 28.949 125.046 185.793 1 30.83 ? CAH 36K 1248 C 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 23 #