data_4BPM # _model_server_result.job_id GX_YIpZxkoAEky4OBDnPVQ _model_server_result.datetime_utc '2024-11-13 14:22:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bpm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1172}' # _entry.id 4BPM # _exptl.entry_id 4BPM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BPM _cell.length_a 86.4 _cell.length_b 86.4 _cell.length_c 181.12 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BPM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 4BPM _atom_sites.fract_transf_matrix[1][1] 0.011574 _atom_sites.fract_transf_matrix[1][2] 0.006682 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005521 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 1172 1172 GSH GSH . C 3 LVJ A 1 1173 1173 LVJ LVJ . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . B 2 -5.737 7.047 48.812 1 43.36 ? N1 GSH 1172 A 1 HETATM 2 C CA1 GSH . . . B 2 -6.217 8.437 48.851 1 50.48 ? CA1 GSH 1172 A 1 HETATM 3 C C1 GSH . . . B 2 -6.33 8.735 50.362 1 61.4 ? C1 GSH 1172 A 1 HETATM 4 O O11 GSH . . . B 2 -6.26 7.875 51.217 1 50.35 ? O11 GSH 1172 A 1 HETATM 5 O O12 GSH . . . B 2 -6.487 10.006 50.613 1 52.4 ? O12 GSH 1172 A 1 HETATM 6 C CB1 GSH . . . B 2 -7.594 8.63 48.161 1 47.81 ? CB1 GSH 1172 A 1 HETATM 7 C CG1 GSH . . . B 2 -7.951 10.102 47.954 1 34.26 ? CG1 GSH 1172 A 1 HETATM 8 C CD1 GSH . . . B 2 -6.804 10.907 47.395 1 57.74 ? CD1 GSH 1172 A 1 HETATM 9 O OE1 GSH . . . B 2 -6.156 10.517 46.427 1 45.18 ? OE1 GSH 1172 A 1 HETATM 10 N N2 GSH . . . B 2 -6.546 12.061 48.017 1 37.64 ? N2 GSH 1172 A 1 HETATM 11 C CA2 GSH . . . B 2 -5.497 12.963 47.571 1 40.05 ? CA2 GSH 1172 A 1 HETATM 12 C C2 GSH . . . B 2 -4.196 12.758 48.342 1 47.13 ? C2 GSH 1172 A 1 HETATM 13 O O2 GSH . . . B 2 -3.238 13.501 48.151 1 40.59 ? O2 GSH 1172 A 1 HETATM 14 C CB2 GSH . . . B 2 -5.915 14.428 47.837 1 53.41 ? CB2 GSH 1172 A 1 HETATM 15 S SG2 GSH . . . B 2 -6.426 14.577 49.568 1 49.04 ? SG2 GSH 1172 A 1 HETATM 16 N N3 GSH . . . B 2 -4.165 11.748 49.212 1 42.39 ? N3 GSH 1172 A 1 HETATM 17 C CA3 GSH . . . B 2 -2.984 11.465 49.999 1 41.56 ? CA3 GSH 1172 A 1 HETATM 18 C C3 GSH . . . B 2 -2.599 10.01 49.993 1 55.54 ? C3 GSH 1172 A 1 HETATM 19 O O31 GSH . . . B 2 -3.023 9.2 49.193 1 52.57 ? O31 GSH 1172 A 1 HETATM 20 O O32 GSH . . . B 2 -1.756 9.715 50.944 1 43.86 ? O32 GSH 1172 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #