data_4BRB # _model_server_result.job_id 3wZ3yFawsV5wlGfa3eWFog _model_server_result.datetime_utc '2024-11-06 01:37:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4brb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1123}' # _entry.id 4BRB # _exptl.entry_id 4BRB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BRB _cell.length_a 75.5 _cell.length_b 91.57 _cell.length_c 143.57 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BRB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,T,U 1 1 D,E,F,O,P,Q,R,S,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D OE1 GLU 37 D GLU 28 1_555 O ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc2 D OE2 GLU 37 D GLU 28 1_555 O ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc3 D OE2 GLU 85 D GLU 76 1_555 O ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc4 D OE1 GLU 85 D GLU 76 1_555 O ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc5 O ZN ZN . D ZN 1122 1_555 P OA2 FLC . D FLC 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc6 O ZN ZN . D ZN 1122 1_555 Q OXT ACT . D ACT 1124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 144 n n CAC OA1 FLC doub 145 n n CAC OA2 FLC sing 146 n n CA CB FLC sing 147 n n CA HA1 FLC sing 148 n n CA HA2 FLC sing 149 n n CB CBC FLC sing 150 n n CB CG FLC sing 151 n n CB OHB FLC sing 152 n n CBC OB1 FLC doub 153 n n CBC OB2 FLC sing 154 n n CG CGC FLC sing 155 n n CG HG1 FLC sing 156 n n CG HG2 FLC sing 157 n n CGC OG1 FLC doub 158 n n CGC OG2 FLC sing 159 n n OHB HOB FLC sing 160 n n # _atom_sites.entry_id 4BRB _atom_sites.fract_transf_matrix[1][1] 0.013245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010921 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 78N A 1 1121 1121 78N 78N . H 2 78N A 1 1122 1122 78N 78N . I 2 78N A 1 1123 1123 78N 78N . J 2 78N A 1 1124 1124 78N 78N . K 2 78N A 1 1125 1125 78N 78N . L 2 78N B 1 1122 1122 78N 78N . M 2 78N B 1 1123 1123 78N 78N . N 2 78N C 1 1122 1122 78N 78N . O 3 ZN D 1 1122 1122 ZN ZN . P 4 FLC D 1 1123 1123 FLC FLC . Q 5 ACT D 1 1124 1124 ACT ACT . R 2 78N D 1 1125 1125 78N 78N . S 2 78N D 1 1126 1126 78N 78N . T 6 HOH A 1 2001 2001 HOH HOH . T 6 HOH A 2 2002 2002 HOH HOH . T 6 HOH A 3 2003 2003 HOH HOH . T 6 HOH A 4 2004 2004 HOH HOH . T 6 HOH A 5 2005 2005 HOH HOH . T 6 HOH A 6 2006 2006 HOH HOH . U 6 HOH B 1 2001 2001 HOH HOH . U 6 HOH B 2 2002 2002 HOH HOH . U 6 HOH B 3 2003 2003 HOH HOH . U 6 HOH B 4 2004 2004 HOH HOH . V 6 HOH D 1 2001 2001 HOH HOH . V 6 HOH D 2 2002 2002 HOH HOH . V 6 HOH D 3 2003 2003 HOH HOH . V 6 HOH D 4 2004 2004 HOH HOH . W 6 HOH E 1 2001 2001 HOH HOH . W 6 HOH E 2 2002 2002 HOH HOH . W 6 HOH E 3 2003 2003 HOH HOH . W 6 HOH E 4 2004 2004 HOH HOH . W 6 HOH E 5 2005 2005 HOH HOH . X 6 HOH F 1 2001 2001 HOH HOH . X 6 HOH F 2 2002 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . P 4 11.976 39.346 -23.847 1 76.61 ? CAC FLC 1123 D 1 HETATM 2 C CA FLC . . . P 4 13.128 39.426 -24.8 1 82.34 ? CA FLC 1123 D 1 HETATM 3 C CB FLC . . . P 4 14.06 38.264 -24.932 1 93.97 ? CB FLC 1123 D 1 HETATM 4 C CBC FLC . . . P 4 15.112 38.252 -23.867 1 95.94 ? CBC FLC 1123 D 1 HETATM 5 C CG FLC . . . P 4 14.722 38.299 -26.273 1 102.93 ? CG FLC 1123 D 1 HETATM 6 C CGC FLC . . . P 4 15.326 37.043 -26.817 1 108.63 ? CGC FLC 1123 D 1 HETATM 7 O OA1 FLC . . . P 4 11.448 38.241 -23.556 1 78.36 ? OA1 FLC 1123 D 1 HETATM 8 O OA2 FLC . . . P 4 11.513 40.388 -23.317 1 71.27 ? OA2 FLC 1123 D 1 HETATM 9 O OB1 FLC . . . P 4 15.079 37.395 -22.945 1 96.12 ? OB1 FLC 1123 D 1 HETATM 10 O OB2 FLC . . . P 4 16.054 39.087 -23.89 1 98.04 ? OB2 FLC 1123 D 1 HETATM 11 O OG1 FLC . . . P 4 15.503 36.901 -28.061 1 110.69 ? OG1 FLC 1123 D 1 HETATM 12 O OG2 FLC . . . P 4 15.659 36.121 -26.026 1 109.46 ? OG2 FLC 1123 D 1 HETATM 13 O OHB FLC . . . P 4 13.326 37.109 -24.825 1 96.96 ? OHB FLC 1123 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #