data_4BSH # _model_server_result.job_id dHW83xXuF4-UFknUTsVoPw _model_server_result.datetime_utc '2024-11-15 15:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bsh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1322}' # _entry.id 4BSH # _exptl.entry_id 4BSH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BSH _cell.length_a 115.897 _cell.length_b 115.897 _cell.length_c 297.497 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BSH _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 57.9485 -100.369746 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 115.897 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N ? 6 K N N ? 6 L N N ? 6 M N N ? 6 N N N ? 6 O N N ? 6 P N N ? 6 Q N N ? 6 R N N ? 6 S N N ? 6 T N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 SIA GAL C2 O2 . O6 HO6 . sing 2 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C GAL 1 C 1 GAL A 1318 GAL 3 n C SIA 2 C 2 SIA A 1317 SIA 4 n D NAG 1 D 1 NAG B 201 NAG 4 n D NAG 2 D 2 NAG B 202 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 B SG CYS 137 B CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 42 A CYS 42 1_555 A SG CYS 268 A CYS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf3 A SG CYS 54 A CYS 54 1_555 A SG CYS 66 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf4 A SG CYS 87 A CYS 87 1_555 A SG CYS 129 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf5 A SG CYS 272 A CYS 272 1_555 A SG CYS 296 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf6 B SG CYS 144 B CYS 144 1_555 B SG CYS 148 B CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? covale ? covale1 A ND2 ASN 28 A ASN 28 1_555 E C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale2 A ND2 ASN 231 A ASN 231 1_555 F C1 NAG . A NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale3 B ND2 ASN 82 B ASN 82 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale4 C O6 GAL . C GAL 1 1_555 C C2 SIA . C SIA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale5 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 384 n n S O2 SO4 doub 385 n n S O3 SO4 sing 386 n n S O4 SO4 sing 387 n n # _atom_sites.entry_id 4BSH _atom_sites.fract_transf_matrix[1][1] 0.008628 _atom_sites.fract_transf_matrix[1][2] 0.004982 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003361 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG A 1 402 402 NAG NAG . F 5 NAG A 1 403 403 NAG NAG . G 6 SO4 A 1 1319 1319 SO4 SO4 . H 6 SO4 A 1 1320 1320 SO4 SO4 . I 6 SO4 A 1 1321 1321 SO4 SO4 . J 6 SO4 A 1 1322 1322 SO4 SO4 . K 6 SO4 A 1 1323 1323 SO4 SO4 . L 6 SO4 A 1 1324 1324 SO4 SO4 . M 6 SO4 A 1 1325 1325 SO4 SO4 . N 6 SO4 A 1 1326 1326 SO4 SO4 . O 6 SO4 A 1 1327 1327 SO4 SO4 . P 6 SO4 A 1 1328 1328 SO4 SO4 . Q 6 SO4 B 1 1171 1171 SO4 SO4 . R 6 SO4 B 1 1172 1172 SO4 SO4 . S 6 SO4 B 1 1173 1173 SO4 SO4 . T 6 SO4 B 1 1174 1174 SO4 SO4 . U 7 HOH A 1 2001 2001 HOH HOH . U 7 HOH A 2 2002 2002 HOH HOH . U 7 HOH A 3 2003 2003 HOH HOH . U 7 HOH A 4 2004 2004 HOH HOH . U 7 HOH A 5 2005 2005 HOH HOH . U 7 HOH A 6 2006 2006 HOH HOH . U 7 HOH A 7 2007 2007 HOH HOH . U 7 HOH A 8 2008 2008 HOH HOH . U 7 HOH A 9 2009 2009 HOH HOH . U 7 HOH A 10 2010 2010 HOH HOH . U 7 HOH A 11 2011 2011 HOH HOH . U 7 HOH A 12 2012 2012 HOH HOH . U 7 HOH A 13 2013 2013 HOH HOH . U 7 HOH A 14 2014 2014 HOH HOH . U 7 HOH A 15 2015 2015 HOH HOH . U 7 HOH A 16 2016 2016 HOH HOH . U 7 HOH A 17 2017 2017 HOH HOH . U 7 HOH A 18 2018 2018 HOH HOH . U 7 HOH A 19 2019 2019 HOH HOH . U 7 HOH A 20 2020 2020 HOH HOH . U 7 HOH A 21 2021 2021 HOH HOH . U 7 HOH A 22 2022 2022 HOH HOH . U 7 HOH A 23 2023 2023 HOH HOH . U 7 HOH A 24 2024 2024 HOH HOH . U 7 HOH A 25 2025 2025 HOH HOH . U 7 HOH A 26 2026 2026 HOH HOH . U 7 HOH A 27 2027 2027 HOH HOH . U 7 HOH A 28 2028 2028 HOH HOH . U 7 HOH A 29 2029 2029 HOH HOH . U 7 HOH A 30 2030 2030 HOH HOH . U 7 HOH A 31 2031 2031 HOH HOH . U 7 HOH A 32 2032 2032 HOH HOH . U 7 HOH A 33 2033 2033 HOH HOH . U 7 HOH A 34 2034 2034 HOH HOH . U 7 HOH A 35 2035 2035 HOH HOH . U 7 HOH A 36 2036 2036 HOH HOH . U 7 HOH A 37 2037 2037 HOH HOH . U 7 HOH A 38 2038 2038 HOH HOH . U 7 HOH A 39 2039 2039 HOH HOH . U 7 HOH A 40 2040 2040 HOH HOH . U 7 HOH A 41 2041 2041 HOH HOH . U 7 HOH A 42 2042 2042 HOH HOH . U 7 HOH A 43 2043 2043 HOH HOH . U 7 HOH A 44 2044 2044 HOH HOH . U 7 HOH A 45 2045 2045 HOH HOH . U 7 HOH A 46 2046 2046 HOH HOH . U 7 HOH A 47 2047 2047 HOH HOH . U 7 HOH A 48 2048 2048 HOH HOH . U 7 HOH A 49 2049 2049 HOH HOH . U 7 HOH A 50 2050 2050 HOH HOH . U 7 HOH A 51 2051 2051 HOH HOH . U 7 HOH A 52 2052 2052 HOH HOH . U 7 HOH A 53 2053 2053 HOH HOH . U 7 HOH A 54 2054 2054 HOH HOH . U 7 HOH A 55 2055 2055 HOH HOH . U 7 HOH A 56 2056 2056 HOH HOH . U 7 HOH A 57 2057 2057 HOH HOH . U 7 HOH A 58 2058 2058 HOH HOH . U 7 HOH A 59 2059 2059 HOH HOH . U 7 HOH A 60 2060 2060 HOH HOH . U 7 HOH A 61 2061 2061 HOH HOH . U 7 HOH A 62 2062 2062 HOH HOH . U 7 HOH A 63 2063 2063 HOH HOH . U 7 HOH A 64 2064 2064 HOH HOH . U 7 HOH A 65 2065 2065 HOH HOH . U 7 HOH A 66 2066 2066 HOH HOH . U 7 HOH A 67 2067 2067 HOH HOH . U 7 HOH A 68 2068 2068 HOH HOH . U 7 HOH A 69 2069 2069 HOH HOH . U 7 HOH A 70 2070 2070 HOH HOH . U 7 HOH A 71 2071 2071 HOH HOH . U 7 HOH A 72 2072 2072 HOH HOH . U 7 HOH A 73 2073 2073 HOH HOH . U 7 HOH A 74 2074 2074 HOH HOH . U 7 HOH A 75 2075 2075 HOH HOH . U 7 HOH A 76 2076 2076 HOH HOH . U 7 HOH A 77 2077 2077 HOH HOH . U 7 HOH A 78 2078 2078 HOH HOH . U 7 HOH A 79 2079 2079 HOH HOH . U 7 HOH A 80 2080 2080 HOH HOH . U 7 HOH A 81 2081 2081 HOH HOH . U 7 HOH A 82 2082 2082 HOH HOH . U 7 HOH A 83 2083 2083 HOH HOH . U 7 HOH A 84 2084 2084 HOH HOH . U 7 HOH A 85 2085 2085 HOH HOH . U 7 HOH A 86 2086 2086 HOH HOH . U 7 HOH A 87 2087 2087 HOH HOH . U 7 HOH A 88 2088 2088 HOH HOH . U 7 HOH A 89 2089 2089 HOH HOH . U 7 HOH A 90 2090 2090 HOH HOH . U 7 HOH A 91 2091 2091 HOH HOH . U 7 HOH A 92 2092 2092 HOH HOH . U 7 HOH A 93 2093 2093 HOH HOH . U 7 HOH A 94 2094 2094 HOH HOH . U 7 HOH A 95 2095 2095 HOH HOH . U 7 HOH A 96 2096 2096 HOH HOH . U 7 HOH A 97 2097 2097 HOH HOH . U 7 HOH A 98 2098 2098 HOH HOH . U 7 HOH A 99 2099 2099 HOH HOH . U 7 HOH A 100 2100 2100 HOH HOH . U 7 HOH A 101 2101 2101 HOH HOH . V 7 HOH B 1 2001 2001 HOH HOH . V 7 HOH B 2 2002 2002 HOH HOH . V 7 HOH B 3 2003 2003 HOH HOH . V 7 HOH B 4 2004 2004 HOH HOH . V 7 HOH B 5 2005 2005 HOH HOH . V 7 HOH B 6 2006 2006 HOH HOH . V 7 HOH B 7 2007 2007 HOH HOH . V 7 HOH B 8 2008 2008 HOH HOH . V 7 HOH B 9 2009 2009 HOH HOH . V 7 HOH B 10 2010 2010 HOH HOH . V 7 HOH B 11 2011 2011 HOH HOH . V 7 HOH B 12 2012 2012 HOH HOH . V 7 HOH B 13 2013 2013 HOH HOH . V 7 HOH B 14 2014 2014 HOH HOH . V 7 HOH B 15 2015 2015 HOH HOH . V 7 HOH B 16 2016 2016 HOH HOH . V 7 HOH B 17 2017 2017 HOH HOH . V 7 HOH B 18 2018 2018 HOH HOH . V 7 HOH B 19 2019 2019 HOH HOH . V 7 HOH B 20 2020 2020 HOH HOH . V 7 HOH B 21 2021 2021 HOH HOH . V 7 HOH B 22 2022 2022 HOH HOH . V 7 HOH B 23 2023 2023 HOH HOH . V 7 HOH B 24 2024 2024 HOH HOH . V 7 HOH B 25 2025 2025 HOH HOH . V 7 HOH B 26 2026 2026 HOH HOH . V 7 HOH B 27 2027 2027 HOH HOH . V 7 HOH B 28 2028 2028 HOH HOH . V 7 HOH B 29 2029 2029 HOH HOH . V 7 HOH B 30 2030 2030 HOH HOH . V 7 HOH B 31 2031 2031 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 6 24.417 -31.373 -11.02 1 124.23 ? S SO4 1322 A 1 HETATM 2 O O1 SO4 . . . J 6 25.594 -30.48 -11.14 1 120.75 ? O1 SO4 1322 A 1 HETATM 3 O O2 SO4 . . . J 6 24.864 -32.777 -10.876 1 114.6 ? O2 SO4 1322 A 1 HETATM 4 O O3 SO4 . . . J 6 23.582 -31.259 -12.238 1 126.95 ? O3 SO4 1322 A 1 HETATM 5 O O4 SO4 . . . J 6 23.62 -30.963 -9.838 1 123.76 ? O4 SO4 1322 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #