data_4BSJ # _model_server_result.job_id Rqp58WKYI0IQa_VwQMstMQ _model_server_result.datetime_utc '2024-10-23 07:19:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4BSJ # _exptl.entry_id 4BSJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BSJ _cell.length_a 133.34 _cell.length_b 133.34 _cell.length_c 48.93 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1,2 A,B,C,D 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 118 A CYS 445 1_555 A SG CYS 207 A CYS 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 139 A CYS 466 1_555 A SG CYS 159 A CYS 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 A ND2 ASN 84 A ASN 411 1_555 B C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 A ND2 ASN 188 A ASN 515 1_555 C C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms ? # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4BSJ _atom_sites.fract_transf_matrix[1][1] 0.0075 _atom_sites.fract_transf_matrix[1][2] 0.00433 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00866 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 601 601 NAG NAG . C 2 NAG A 1 602 701 NAG NAG . D 3 HOH A 1 701 2002 HOH HOH . D 3 HOH A 2 702 2004 HOH HOH . D 3 HOH A 3 703 2015 HOH HOH . D 3 HOH A 4 704 2009 HOH HOH . D 3 HOH A 5 705 2018 HOH HOH . D 3 HOH A 6 706 2003 HOH HOH . D 3 HOH A 7 707 2019 HOH HOH . D 3 HOH A 8 708 2001 HOH HOH . D 3 HOH A 9 709 2008 HOH HOH . D 3 HOH A 10 710 2014 HOH HOH . D 3 HOH A 11 711 2007 HOH HOH . D 3 HOH A 12 712 2005 HOH HOH . D 3 HOH A 13 713 2006 HOH HOH . D 3 HOH A 14 714 2012 HOH HOH . D 3 HOH A 15 715 2021 HOH HOH . D 3 HOH A 16 716 2010 HOH HOH . D 3 HOH A 17 717 2020 HOH HOH . D 3 HOH A 18 718 2011 HOH HOH . D 3 HOH A 19 719 2013 HOH HOH . D 3 HOH A 20 720 2017 HOH HOH . D 3 HOH A 21 721 2016 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . B 2 -1.363 38.825 -16.298 1 77.48 ? C1 NAG 601 A 1 HETATM 2 C C2 NAG . . . B 2 -2.079 39.22 -17.593 1 78.89 ? C2 NAG 601 A 1 HETATM 3 C C3 NAG . . . B 2 -1.398 38.658 -18.846 1 83.07 ? C3 NAG 601 A 1 HETATM 4 C C4 NAG . . . B 2 0.116 38.823 -18.797 1 84.58 ? C4 NAG 601 A 1 HETATM 5 C C5 NAG . . . B 2 0.647 38.266 -17.484 1 81.67 ? C5 NAG 601 A 1 HETATM 6 C C6 NAG . . . B 2 2.165 38.399 -17.394 1 81.49 ? C6 NAG 601 A 1 HETATM 7 C C7 NAG . . . B 2 -4.473 39.579 -17.196 1 76.86 ? C7 NAG 601 A 1 HETATM 8 C C8 NAG . . . B 2 -5.722 38.91 -16.698 1 68.22 ? C8 NAG 601 A 1 HETATM 9 N N2 NAG . . . B 2 -3.463 38.774 -17.535 1 76.94 ? N2 NAG 601 A 1 HETATM 10 O O3 NAG . . . B 2 -1.889 39.305 -20.001 1 82.94 ? O3 NAG 601 A 1 HETATM 11 O O4 NAG . . . B 2 0.718 38.159 -19.891 1 84.92 ? O4 NAG 601 A 1 HETATM 12 O O5 NAG . . . B 2 0.046 38.947 -16.401 1 81.3 ? O5 NAG 601 A 1 HETATM 13 O O6 NAG . . . B 2 2.542 39.758 -17.462 1 81.13 ? O6 NAG 601 A 1 HETATM 14 O O7 NAG . . . B 2 -4.416 40.807 -17.267 1 77.52 ? O7 NAG 601 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #