data_4BUM # _model_server_result.job_id enq6ox76AG79lZzvwNVqeA _model_server_result.datetime_utc '2024-11-04 22:36:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bum # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1284}' # _entry.id 4BUM # _exptl.entry_id 4BUM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BUM _cell.length_a 72.47 _cell.length_b 72.47 _cell.length_c 177.95 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BUM _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 173 n n N1 CM1 LDA sing 174 n n N1 CM2 LDA sing 175 n n N1 C1 LDA sing 176 n n CM1 HM11 LDA sing 177 n n CM1 HM12 LDA sing 178 n n CM1 HM13 LDA sing 179 n n CM2 HM21 LDA sing 180 n n CM2 HM22 LDA sing 181 n n CM2 HM23 LDA sing 182 n n C1 C2 LDA sing 183 n n C1 H11 LDA sing 184 n n C1 H12 LDA sing 185 n n C2 C3 LDA sing 186 n n C2 H21 LDA sing 187 n n C2 H22 LDA sing 188 n n C3 C4 LDA sing 189 n n C3 H31 LDA sing 190 n n C3 H32 LDA sing 191 n n C4 C5 LDA sing 192 n n C4 H41 LDA sing 193 n n C4 H42 LDA sing 194 n n C5 C6 LDA sing 195 n n C5 H51 LDA sing 196 n n C5 H52 LDA sing 197 n n C6 C7 LDA sing 198 n n C6 H61 LDA sing 199 n n C6 H62 LDA sing 200 n n C7 C8 LDA sing 201 n n C7 H71 LDA sing 202 n n C7 H72 LDA sing 203 n n C8 C9 LDA sing 204 n n C8 H81 LDA sing 205 n n C8 H82 LDA sing 206 n n C9 C10 LDA sing 207 n n C9 H91 LDA sing 208 n n C9 H92 LDA sing 209 n n C10 C11 LDA sing 210 n n C10 H101 LDA sing 211 n n C10 H102 LDA sing 212 n n C11 C12 LDA sing 213 n n C11 H111 LDA sing 214 n n C11 H112 LDA sing 215 n n C12 H121 LDA sing 216 n n C12 H122 LDA sing 217 n n C12 H123 LDA sing 218 n n # _atom_sites.entry_id 4BUM _atom_sites.fract_transf_matrix[1][1] 0.013799 _atom_sites.fract_transf_matrix[1][2] 0.007967 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00562 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LDA X 1 1284 1284 LDA LDA . C 3 HOH X 1 2001 2001 HOH HOH . C 3 HOH X 2 2002 2002 HOH HOH . C 3 HOH X 3 2003 2003 HOH HOH . C 3 HOH X 4 2004 2004 HOH HOH . C 3 HOH X 5 2005 2005 HOH HOH . C 3 HOH X 6 2006 2006 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . B 2 -1.112 3.067 9.631 1 77.01 1 N1 LDA 1284 X 1 HETATM 2 O O1 LDA . . . B 2 -2.349 3.43 9.647 1 82.1 -1 O1 LDA 1284 X 1 HETATM 3 C CM1 LDA . . . B 2 -0.551 3.385 8.344 1 77.35 ? CM1 LDA 1284 X 1 HETATM 4 C CM2 LDA . . . B 2 -1.034 1.68 9.829 1 77.93 ? CM2 LDA 1284 X 1 HETATM 5 C C1 LDA . . . B 2 -0.418 3.755 10.66 1 66.5 ? C1 LDA 1284 X 1 HETATM 6 C C2 LDA . . . B 2 -1.243 4.703 11.557 1 56.99 ? C2 LDA 1284 X 1 HETATM 7 C C3 LDA . . . B 2 -0.521 5.42 12.7 1 49.01 ? C3 LDA 1284 X 1 HETATM 8 C C4 LDA . . . B 2 -1.31 6.483 13.475 1 44.38 ? C4 LDA 1284 X 1 HETATM 9 C C5 LDA . . . B 2 -0.646 7.136 14.671 1 41.17 ? C5 LDA 1284 X 1 HETATM 10 C C6 LDA . . . B 2 -0.865 8.646 14.873 1 40.04 ? C6 LDA 1284 X 1 HETATM 11 C C7 LDA . . . B 2 0.357 9.486 15.187 1 43.39 ? C7 LDA 1284 X 1 HETATM 12 C C8 LDA . . . B 2 0.257 10.998 15.002 1 43.87 ? C8 LDA 1284 X 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #