data_4BUR # _model_server_result.job_id 6nKeZW2CEMTY4OK_l01M0w _model_server_result.datetime_utc '2024-11-15 18:53:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bur # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1612}' # _entry.id 4BUR # _exptl.entry_id 4BUR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4BUR _cell.length_a 120.766 _cell.length_b 120.766 _cell.length_c 343.359 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BUR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,R 1 1 B,H,I,J,S 2 1 C,K,L,M,T 3 1 D,N,O,P,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 J N N ? 3 M N N ? 3 P N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 4BUR _atom_sites.fract_transf_matrix[1][1] 0.00828 _atom_sites.fract_transf_matrix[1][2] 0.004781 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009561 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 700 700 NAD NAD . F 2 NAD A 1 701 701 NAD NAD . G 3 FAD A 1 1612 1612 FAD FAD . H 2 NAD B 1 700 700 NAD NAD . I 2 NAD B 1 701 701 NAD NAD . J 3 FAD B 1 1612 1612 FAD FAD . K 2 NAD C 1 700 700 NAD NAD . L 2 NAD C 1 701 701 NAD NAD . M 3 FAD C 1 1612 1612 FAD FAD . N 2 NAD D 1 700 700 NAD NAD . O 2 NAD D 1 701 701 NAD NAD . P 3 FAD D 1 1612 1612 FAD FAD . Q 4 SO4 D 1 1613 1613 SO4 SO4 . R 5 HOH A 1 2001 2001 HOH HOH . R 5 HOH A 2 2002 2002 HOH HOH . R 5 HOH A 3 2003 2003 HOH HOH . R 5 HOH A 4 2004 2004 HOH HOH . R 5 HOH A 5 2005 2005 HOH HOH . R 5 HOH A 6 2006 2006 HOH HOH . R 5 HOH A 7 2007 2007 HOH HOH . R 5 HOH A 8 2008 2008 HOH HOH . R 5 HOH A 9 2009 2009 HOH HOH . S 5 HOH B 1 2001 2001 HOH HOH . S 5 HOH B 2 2002 2002 HOH HOH . S 5 HOH B 3 2003 2003 HOH HOH . S 5 HOH B 4 2004 2004 HOH HOH . S 5 HOH B 5 2005 2005 HOH HOH . S 5 HOH B 6 2006 2006 HOH HOH . S 5 HOH B 7 2007 2007 HOH HOH . S 5 HOH B 8 2008 2008 HOH HOH . T 5 HOH C 1 2001 2001 HOH HOH . T 5 HOH C 2 2002 2002 HOH HOH . T 5 HOH C 3 2003 2003 HOH HOH . T 5 HOH C 4 2004 2004 HOH HOH . T 5 HOH C 5 2005 2005 HOH HOH . T 5 HOH C 6 2006 2006 HOH HOH . T 5 HOH C 7 2007 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . M 3 72.143 -76.449 -54.288 1 38.03 ? PA FAD 1612 C 1 HETATM 2 O O1A FAD . . . M 3 73.456 -77.015 -53.916 1 37.63 ? O1A FAD 1612 C 1 HETATM 3 O O2A FAD . . . M 3 71.654 -76.624 -55.663 1 39.8 ? O2A FAD 1612 C 1 HETATM 4 O O5B FAD . . . M 3 71.051 -77.117 -53.253 1 44.27 ? O5B FAD 1612 C 1 HETATM 5 C C5B FAD . . . M 3 69.673 -76.698 -53.202 1 43.83 ? C5B FAD 1612 C 1 HETATM 6 C C4B FAD . . . M 3 68.832 -77.791 -52.552 1 46.82 ? C4B FAD 1612 C 1 HETATM 7 O O4B FAD . . . M 3 67.433 -77.379 -52.473 1 48.94 ? O4B FAD 1612 C 1 HETATM 8 C C3B FAD . . . M 3 68.813 -79.041 -53.414 1 49.12 ? C3B FAD 1612 C 1 HETATM 9 O O3B FAD . . . M 3 68.793 -80.197 -52.528 1 54.91 ? O3B FAD 1612 C 1 HETATM 10 C C2B FAD . . . M 3 67.473 -78.931 -54.107 1 49.51 ? C2B FAD 1612 C 1 HETATM 11 O O2B FAD . . . M 3 67.094 -80.214 -54.563 1 52.38 ? O2B FAD 1612 C 1 HETATM 12 C C1B FAD . . . M 3 66.646 -78.51 -52.909 1 47.56 ? C1B FAD 1612 C 1 HETATM 13 N N9A FAD . . . M 3 65.305 -77.948 -53.184 1 46.31 ? N9A FAD 1612 C 1 HETATM 14 C C8A FAD . . . M 3 64.898 -77.263 -54.247 1 48.15 ? C8A FAD 1612 C 1 HETATM 15 N N7A FAD . . . M 3 63.62 -76.911 -54.07 1 48.06 ? N7A FAD 1612 C 1 HETATM 16 C C5A FAD . . . M 3 63.222 -77.374 -52.886 1 46.46 ? C5A FAD 1612 C 1 HETATM 17 C C6A FAD . . . M 3 62.049 -77.295 -52.239 1 43.75 ? C6A FAD 1612 C 1 HETATM 18 N N6A FAD . . . M 3 61.053 -76.654 -52.833 1 42.12 ? N6A FAD 1612 C 1 HETATM 19 N N1A FAD . . . M 3 61.876 -77.843 -51.037 1 43.67 ? N1A FAD 1612 C 1 HETATM 20 C C2A FAD . . . M 3 62.945 -78.514 -50.438 1 44.07 ? C2A FAD 1612 C 1 HETATM 21 N N3A FAD . . . M 3 64.161 -78.579 -51.123 1 45.88 ? N3A FAD 1612 C 1 HETATM 22 C C4A FAD . . . M 3 64.275 -78.01 -52.337 1 46.78 ? C4A FAD 1612 C 1 HETATM 23 N N1 FAD . . . M 3 81.11 -73.914 -58.255 1 32.04 ? N1 FAD 1612 C 1 HETATM 24 C C2 FAD . . . M 3 82.409 -73.38 -58.183 1 32.03 ? C2 FAD 1612 C 1 HETATM 25 O O2 FAD . . . M 3 82.583 -72.195 -57.924 1 35.47 ? O2 FAD 1612 C 1 HETATM 26 N N3 FAD . . . M 3 83.521 -74.173 -58.388 1 30.89 ? N3 FAD 1612 C 1 HETATM 27 C C4 FAD . . . M 3 83.331 -75.514 -58.675 1 32.22 ? C4 FAD 1612 C 1 HETATM 28 O O4 FAD . . . M 3 84.362 -76.171 -58.864 1 34.83 ? O4 FAD 1612 C 1 HETATM 29 C C4X FAD . . . M 3 82.028 -76.066 -58.76 1 31.76 ? C4X FAD 1612 C 1 HETATM 30 N N5 FAD . . . M 3 81.845 -77.367 -59.066 1 32.02 ? N5 FAD 1612 C 1 HETATM 31 C C5X FAD . . . M 3 80.613 -77.84 -59.368 1 32.37 ? C5X FAD 1612 C 1 HETATM 32 C C6 FAD . . . M 3 80.456 -79.127 -59.884 1 32.95 ? C6 FAD 1612 C 1 HETATM 33 C C7 FAD . . . M 3 79.191 -79.635 -60.193 1 32.9 ? C7 FAD 1612 C 1 HETATM 34 C C7M FAD . . . M 3 79.031 -80.924 -60.708 1 32.74 ? C7M FAD 1612 C 1 HETATM 35 C C8 FAD . . . M 3 78.069 -78.846 -59.979 1 33.38 ? C8 FAD 1612 C 1 HETATM 36 C C8M FAD . . . M 3 76.803 -79.356 -60.272 1 32.88 ? C8M FAD 1612 C 1 HETATM 37 C C9 FAD . . . M 3 78.218 -77.559 -59.455 1 33.18 ? C9 FAD 1612 C 1 HETATM 38 C C9A FAD . . . M 3 79.484 -77.046 -59.155 1 33.13 ? C9A FAD 1612 C 1 HETATM 39 N N10 FAD . . . M 3 79.623 -75.806 -58.623 1 34.69 ? N10 FAD 1612 C 1 HETATM 40 C C10 FAD . . . M 3 80.892 -75.27 -58.545 1 32.55 ? C10 FAD 1612 C 1 HETATM 41 C C1' FAD . . . M 3 78.379 -75.158 -57.995 1 37.15 ? C1' FAD 1612 C 1 HETATM 42 C C2' FAD . . . M 3 78.407 -75.332 -56.471 1 41.26 ? C2' FAD 1612 C 1 HETATM 43 O O2' FAD . . . M 3 78.835 -76.651 -56.199 1 50.42 ? O2' FAD 1612 C 1 HETATM 44 C C3' FAD . . . M 3 77.121 -75.101 -55.616 1 44.25 ? C3' FAD 1612 C 1 HETATM 45 O O3' FAD . . . M 3 76.294 -76.251 -55.455 1 45.97 ? O3' FAD 1612 C 1 HETATM 46 C C4' FAD . . . M 3 76.193 -74.045 -56.088 1 47.25 ? C4' FAD 1612 C 1 HETATM 47 O O4' FAD . . . M 3 76.949 -72.994 -56.753 1 50.13 ? O4' FAD 1612 C 1 HETATM 48 C C5' FAD . . . M 3 75.517 -73.583 -54.77 1 43.7 ? C5' FAD 1612 C 1 HETATM 49 O O5' FAD . . . M 3 74.599 -74.522 -54.192 1 39.25 ? O5' FAD 1612 C 1 HETATM 50 P P FAD . . . M 3 73.185 -74.004 -53.366 1 39.87 ? P FAD 1612 C 1 HETATM 51 O O1P FAD . . . M 3 72.879 -72.567 -53.625 1 33.39 ? O1P FAD 1612 C 1 HETATM 52 O O2P FAD . . . M 3 73.247 -74.517 -51.978 1 40.15 ? O2P FAD 1612 C 1 HETATM 53 O O3P FAD . . . M 3 71.978 -74.875 -53.98 1 37.21 ? O3P FAD 1612 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #