data_4BVN
#
_model_server_result.job_id            vbygk4RYNcZLxhgf_gDZoA 
_model_server_result.datetime_utc      '2024-11-01 13:33:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4bvn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1361}' 
#
_entry.id    4BVN 
#
_exptl.entry_id    4BVN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              287.357 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4BVN 
_cell.length_a            53.093 
_cell.length_b            62.127 
_cell.length_c            95.776 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4BVN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 84 A CYS 114 1_555 A SG CYS 169 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf2 A SG CYS 162 A CYS 192 1_555 A SG CYS 168 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc1 A OD1 ASP 57 A ASP 87 1_555 B NA NA . A NA 1359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc2 A OG SER 98 A SER 128 1_555 B NA NA . A NA 1359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc3 A O CYS 162 A CYS 192 1_555 C NA NA . A NA 1360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc4 A O ASP 165 A ASP 195 1_555 C NA NA . A NA 1360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc5 A O CYS 168 A CYS 198 1_555 C NA NA . A NA 1360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc6 B NA NA . A NA 1359 1_555 M O HOH . A HOH 3005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc7 B NA NA . A NA 1359 1_555 M O HOH . A HOH 3006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc8 B NA NA . A NA 1359 1_555 M O HOH . A HOH 3032 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc9 C NA NA . A NA 1360 1_555 M O HOH . A HOH 3013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? 
metalc ? metalc10 C NA NA . A NA 1360 1_555 M O HOH . A HOH 3021 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? 
#
_chem_comp.formula           'C16 H21 N3 O2' 
_chem_comp.formula_weight    287.357 
_chem_comp.id                P32 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C16 N3 P32 trip 323 n n 
C16 C1 P32 sing 324 n n 
N1 C1 P32 doub 325 n n 
N1 C8 P32 sing 326 n n 
C1 C2 P32 sing 327 n n 
C2 C3 P32 sing 328 n n 
C3 C4 P32 sing 329 n y 
C3 C8 P32 doub 330 n y 
C4 C5 P32 doub 331 n y 
C4 O1 P32 sing 332 n n 
C5 C6 P32 sing 333 n y 
C6 C7 P32 doub 334 n y 
C7 C8 P32 sing 335 n y 
O1 C9 P32 sing 336 n n 
C9 C10 P32 sing 337 n n 
C10 O2 P32 sing 338 n n 
C10 C11 P32 sing 339 n n 
C11 N2 P32 sing 340 n n 
N2 C12 P32 sing 341 n n 
C12 C13 P32 sing 342 n n 
C12 C14 P32 sing 343 n n 
C12 C15 P32 sing 344 n n 
C2 H2 P32 sing 345 n n 
C2 H1 P32 sing 346 n n 
C5 H5 P32 sing 347 n n 
C6 H6 P32 sing 348 n n 
C7 H7 P32 sing 349 n n 
C9 H9C1 P32 sing 350 n n 
C9 H9C2 P32 sing 351 n n 
C10 H10 P32 sing 352 n n 
O2 HA P32 sing 353 n n 
C11 H111 P32 sing 354 n n 
C11 H112 P32 sing 355 n n 
N2 HB P32 sing 356 n n 
C13 H131 P32 sing 357 n n 
C13 H132 P32 sing 358 n n 
C13 H133 P32 sing 359 n n 
C14 H141 P32 sing 360 n n 
C14 H142 P32 sing 361 n n 
C14 H143 P32 sing 362 n n 
C15 H151 P32 sing 363 n n 
C15 H152 P32 sing 364 n n 
C15 H153 P32 sing 365 n n 
#
_atom_sites.entry_id                     4BVN 
_atom_sites.fract_transf_matrix[1][1]    0.018835 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016096 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010441 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 1359 1359 NA NA . 
C 2 NA A 1 1360 1360 NA NA . 
D 3 P32 A 1 1361 1361 P32 P32 . 
E 4 MHA A 1 1362 1362 MHA MHA . 
F 5 OLC A 1 2001 2001 OLC OLC . 
G 5 OLC A 1 2002 2002 OLC OLC . 
H 5 OLC A 1 2003 2003 OLC OLC . 
I 5 OLC A 1 2004 2004 OLC OLC . 
J 5 OLC A 1 2005 2005 OLC OLC . 
K 5 OLC A 1 2006 2006 OLC OLC . 
L 5 OLC A 1 2007 2007 OLC OLC . 
M 6 HOH A 1 3001 3001 HOH HOH . 
M 6 HOH A 2 3002 3002 HOH HOH . 
M 6 HOH A 3 3003 3003 HOH HOH . 
M 6 HOH A 4 3004 3004 HOH HOH . 
M 6 HOH A 5 3005 3005 HOH HOH . 
M 6 HOH A 6 3006 3006 HOH HOH . 
M 6 HOH A 7 3007 3007 HOH HOH . 
M 6 HOH A 8 3008 3008 HOH HOH . 
M 6 HOH A 9 3009 3009 HOH HOH . 
M 6 HOH A 10 3010 3010 HOH HOH . 
M 6 HOH A 11 3011 3011 HOH HOH . 
M 6 HOH A 12 3012 3012 HOH HOH . 
M 6 HOH A 13 3013 3013 HOH HOH . 
M 6 HOH A 14 3014 3014 HOH HOH . 
M 6 HOH A 15 3015 3015 HOH HOH . 
M 6 HOH A 16 3016 3016 HOH HOH . 
M 6 HOH A 17 3017 3017 HOH HOH . 
M 6 HOH A 18 3018 3018 HOH HOH . 
M 6 HOH A 19 3019 3019 HOH HOH . 
M 6 HOH A 20 3020 3020 HOH HOH . 
M 6 HOH A 21 3021 3021 HOH HOH . 
M 6 HOH A 22 3022 3022 HOH HOH . 
M 6 HOH A 23 3023 3023 HOH HOH . 
M 6 HOH A 24 3024 3024 HOH HOH . 
M 6 HOH A 25 3025 3025 HOH HOH . 
M 6 HOH A 26 3026 3026 HOH HOH . 
M 6 HOH A 27 3027 3027 HOH HOH . 
M 6 HOH A 28 3028 3028 HOH HOH . 
M 6 HOH A 29 3029 3029 HOH HOH . 
M 6 HOH A 30 3030 3030 HOH HOH . 
M 6 HOH A 31 3031 3031 HOH HOH . 
M 6 HOH A 32 3032 3032 HOH HOH . 
M 6 HOH A 33 3033 3033 HOH HOH . 
M 6 HOH A 34 3034 3034 HOH HOH . 
M 6 HOH A 35 3035 3035 HOH HOH . 
M 6 HOH A 36 3036 3036 HOH HOH . 
M 6 HOH A 37 3037 3037 HOH HOH . 
M 6 HOH A 38 3038 3038 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2 P32 . . . D 3 -23.927 4.453 18.022 1 17.45 ? O2 P32 1361 A 1 
HETATM 2 C C10 P32 . . . D 3 -24.11 5.308 16.851 1 19.5 ? C10 P32 1361 A 1 
HETATM 3 N N3 P32 . . . D 3 -25.078 9.839 10.026 1 22.71 ? N3 P32 1361 A 1 
HETATM 4 C C11 P32 . . . D 3 -23.18 6.482 16.848 1 19.65 ? C11 P32 1361 A 1 
HETATM 5 N N2 P32 . . . D 3 -23.264 7.188 18.13 1 21.54 ? N2 P32 1361 A 1 
HETATM 6 C C12 P32 . . . D 3 -22.784 8.634 18.042 1 22.31 ? C12 P32 1361 A 1 
HETATM 7 C C15 P32 . . . D 3 -21.478 8.819 17.25 1 22.06 ? C15 P32 1361 A 1 
HETATM 8 C C13 P32 . . . D 3 -22.548 9.268 19.452 1 21.91 ? C13 P32 1361 A 1 
HETATM 9 C C9 P32 . . . D 3 -23.752 4.506 15.601 1 19.67 ? C9 P32 1361 A 1 
HETATM 10 O O1 P32 . . . D 3 -24.237 5.191 14.527 1 19.01 ? O1 P32 1361 A 1 
HETATM 11 C C4 P32 . . . D 3 -23.846 4.761 13.267 1 16.43 ? C4 P32 1361 A 1 
HETATM 12 C C5 P32 . . . D 3 -23.365 3.509 13.003 1 16.82 ? C5 P32 1361 A 1 
HETATM 13 C C6 P32 . . . D 3 -22.986 3.135 11.711 1 16.72 ? C6 P32 1361 A 1 
HETATM 14 C C7 P32 . . . D 3 -23.167 4.078 10.687 1 17.21 ? C7 P32 1361 A 1 
HETATM 15 C C8 P32 . . . D 3 -23.644 5.302 10.971 1 16.93 ? C8 P32 1361 A 1 
HETATM 16 C C3 P32 . . . D 3 -23.977 5.641 12.254 1 17.17 ? C3 P32 1361 A 1 
HETATM 17 N N1 P32 . . . D 3 -23.837 6.367 10.193 1 17.62 ? N1 P32 1361 A 1 
HETATM 18 C C1 P32 . . . D 3 -24.37 7.312 10.935 1 19.15 ? C1 P32 1361 A 1 
HETATM 19 C C2 P32 . . . D 3 -24.453 6.886 12.216 1 17.84 ? C2 P32 1361 A 1 
HETATM 20 C C16 P32 . . . D 3 -24.759 8.667 10.469 1 22.22 ? C16 P32 1361 A 1 
HETATM 21 C C14 P32 . . . D 3 -23.856 9.507 17.32 1 20.43 ? C14 P32 1361 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           21 
#