data_4BVV # _model_server_result.job_id lSjQ0J279-ww75r3U5OcVQ _model_server_result.datetime_utc '2024-11-29 04:18:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bvv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1081}' # _entry.id 4BVV # _exptl.entry_id 4BVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 331.342 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4BVV _cell.length_a 31.56 _cell.length_b 46.96 _cell.length_c 48.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 1 1_555 A SG CYS 81 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 23 A CYS 22 1_555 A SG CYS 64 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 52 A CYS 51 1_555 A SG CYS 76 A CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C17 H18 F N3 O3' _chem_comp.formula_weight 331.342 _chem_comp.id CPF _chem_comp.mon_nstd_flag . _chem_comp.name '1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ciprofloxacin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C3 CPF sing 70 n n O2 HO2 CPF sing 71 n n C3 O1 CPF doub 72 n n C3 C2 CPF sing 73 n n C2 C1 CPF doub 74 n n C2 C4 CPF sing 75 n n C1 N1 CPF sing 76 n n C1 H1 CPF sing 77 n n N1 C10 CPF sing 78 n n N1 C11 CPF sing 79 n n C10 C9 CPF doub 80 n y C10 C5 CPF sing 81 n y C9 C8 CPF sing 82 n y C9 H9 CPF sing 83 n n C8 N2 CPF sing 84 n n C8 C7 CPF doub 85 n y N2 C17 CPF sing 86 n n N2 C14 CPF sing 87 n n C17 C16 CPF sing 88 n n C17 H171 CPF sing 89 n n C17 H172 CPF sing 90 n n C16 N3 CPF sing 91 n n C16 H161 CPF sing 92 n n C16 H162 CPF sing 93 n n N3 C15 CPF sing 94 n n N3 HN3 CPF sing 95 n n C15 C14 CPF sing 96 n n C15 H151 CPF sing 97 n n C15 H152 CPF sing 98 n n C14 H141 CPF sing 99 n n C14 H142 CPF sing 100 n n C7 F1 CPF sing 101 n n C7 C6 CPF sing 102 n y C6 C5 CPF doub 103 n y C6 H6 CPF sing 104 n n C5 C4 CPF sing 105 n n C4 O3 CPF doub 106 n n C11 C12 CPF sing 107 n n C11 C13 CPF sing 108 n n C11 H11 CPF sing 109 n n C12 C13 CPF sing 110 n n C12 H121 CPF sing 111 n n C12 H122 CPF sing 112 n n C13 H131 CPF sing 113 n n C13 H132 CPF sing 114 n n # _atom_sites.entry_id 4BVV _atom_sites.fract_transf_matrix[1][1] 0.031686 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CPF A 1 1081 1081 CPF CPF . C 3 SO4 A 1 1082 1082 SO4 SO4 . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 CPF . . . B 2 0.237 2.133 0.475 1 10.21 ? O2 CPF 1081 A 1 HETATM 2 C C3 CPF . . . B 2 -0.465 2.315 -0.506 1 9.7 ? C3 CPF 1081 A 1 HETATM 3 O O1 CPF . . . B 2 -0.278 1.516 -1.572 1 10.07 ? O1 CPF 1081 A 1 HETATM 4 C C2 CPF . . . B 2 -1.494 3.379 -0.537 1 9.22 ? C2 CPF 1081 A 1 HETATM 5 C C1 CPF . . . B 2 -1.806 4.116 0.596 1 8.98 ? C1 CPF 1081 A 1 HETATM 6 N N1 CPF . . . B 2 -2.752 5.086 0.619 1 8.83 ? N1 CPF 1081 A 1 HETATM 7 C C10 CPF . . . B 2 -3.512 5.406 -0.503 1 8.76 ? C10 CPF 1081 A 1 HETATM 8 C C9 CPF . . . B 2 -4.52 6.381 -0.454 1 8.83 ? C9 CPF 1081 A 1 HETATM 9 C C8 CPF . . . B 2 -5.278 6.708 -1.584 1 8.93 ? C8 CPF 1081 A 1 HETATM 10 N N2 CPF . . . B 2 -6.296 7.688 -1.517 1 9.23 ? N2 CPF 1081 A 1 HETATM 11 C C17 CPF . . . B 2 -6.486 8.27 -0.158 1 9.39 ? C17 CPF 1081 A 1 HETATM 12 C C16 CPF . . . B 2 -7.618 9.321 -0.137 1 9.48 ? C16 CPF 1081 A 1 HETATM 13 N N3 CPF . . . B 2 -8.859 8.728 -0.678 1 9.78 ? N3 CPF 1081 A 1 HETATM 14 C C15 CPF . . . B 2 -8.659 8.223 -2.049 1 9.52 ? C15 CPF 1081 A 1 HETATM 15 C C14 CPF . . . B 2 -7.585 7.125 -1.992 1 9.44 ? C14 CPF 1081 A 1 HETATM 16 C C7 CPF . . . B 2 -4.993 6.05 -2.801 1 8.81 ? C7 CPF 1081 A 1 HETATM 17 F F1 CPF . . . B 2 -5.689 6.353 -3.923 1 8.63 ? F1 CPF 1081 A 1 HETATM 18 C C6 CPF . . . B 2 -4.02 5.08 -2.871 1 8.73 ? C6 CPF 1081 A 1 HETATM 19 C C5 CPF . . . B 2 -3.257 4.748 -1.736 1 8.83 ? C5 CPF 1081 A 1 HETATM 20 C C4 CPF . . . B 2 -2.216 3.691 -1.792 1 9.03 ? C4 CPF 1081 A 1 HETATM 21 O O3 CPF . . . B 2 -2.013 3.037 -2.813 1 8.95 ? O3 CPF 1081 A 1 HETATM 22 C C11 CPF . . . B 2 -2.975 5.819 1.879 1 8.75 ? C11 CPF 1081 A 1 HETATM 23 C C12 CPF . . . B 2 -1.773 6.166 2.771 1 8.73 ? C12 CPF 1081 A 1 HETATM 24 C C13 CPF . . . B 2 -2.451 7.26 1.949 1 8.73 ? C13 CPF 1081 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #