data_4BWI # _model_server_result.job_id 0lCie7WZXll7GUS18ejH_A _model_server_result.datetime_utc '2024-10-19 14:32:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bwi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1422}' # _entry.id 4BWI # _exptl.entry_id 4BWI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 588.694 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHYCOCYANOBILIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.85 _cell.angle_gamma 90 _cell.entry_id 4BWI _cell.length_a 77.43 _cell.length_b 88.46 _cell.length_c 84.87 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BWI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D CAC CYC . A CYC 1422 1_555 A SG CYS 129 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? covale ? covale2 I CAC CYC . B CYC 1419 1_555 B SG CYS 129 B CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? # _chem_comp.formula 'C33 H40 N4 O6' _chem_comp.formula_weight 588.694 _chem_comp.id CYC _chem_comp.mon_nstd_flag . _chem_comp.name PHYCOCYANOBILIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4BWI _atom_sites.fract_transf_matrix[1][1] 0.012915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004662 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GLU A 1 1427 1427 GLU GLU . D 3 CYC A 1 1422 1422 CYC CYC . E 4 GOL A 1 1423 1423 GOL GOL . F 5 FMT A 1 1424 1424 FMT FMT . G 5 FMT A 1 1425 1425 FMT FMT . H 5 FMT A 1 1426 1426 FMT FMT . I 3 CYC B 1 1419 1419 CYC CYC . J 4 GOL B 1 1420 1420 GOL GOL . K 5 FMT B 1 1421 1421 FMT FMT . L 5 FMT B 1 1422 1422 FMT FMT . M 5 FMT B 1 1423 1423 FMT FMT . N 5 FMT B 1 1424 1424 FMT FMT . O 6 HOH A 1 2001 2001 HOH HOH . O 6 HOH A 2 2002 2002 HOH HOH . O 6 HOH A 3 2003 2003 HOH HOH . O 6 HOH A 4 2004 2004 HOH HOH . O 6 HOH A 5 2005 2005 HOH HOH . O 6 HOH A 6 2006 2006 HOH HOH . O 6 HOH A 7 2007 2007 HOH HOH . O 6 HOH A 8 2008 2008 HOH HOH . O 6 HOH A 9 2009 2009 HOH HOH . O 6 HOH A 10 2010 2010 HOH HOH . O 6 HOH A 11 2011 2011 HOH HOH . O 6 HOH A 12 2012 2012 HOH HOH . O 6 HOH A 13 2013 2013 HOH HOH . O 6 HOH A 14 2014 2014 HOH HOH . O 6 HOH A 15 2015 2015 HOH HOH . O 6 HOH A 16 2016 2016 HOH HOH . O 6 HOH A 17 2017 2017 HOH HOH . O 6 HOH A 18 2018 2018 HOH HOH . O 6 HOH A 19 2019 2019 HOH HOH . O 6 HOH A 20 2020 2020 HOH HOH . O 6 HOH A 21 2021 2021 HOH HOH . O 6 HOH A 22 2022 2022 HOH HOH . O 6 HOH A 23 2023 2023 HOH HOH . O 6 HOH A 24 2024 2024 HOH HOH . O 6 HOH A 25 2025 2025 HOH HOH . O 6 HOH A 26 2026 2026 HOH HOH . O 6 HOH A 27 2027 2027 HOH HOH . O 6 HOH A 28 2028 2028 HOH HOH . O 6 HOH A 29 2029 2029 HOH HOH . O 6 HOH A 30 2030 2030 HOH HOH . O 6 HOH A 31 2031 2031 HOH HOH . O 6 HOH A 32 2032 2032 HOH HOH . O 6 HOH A 33 2033 2033 HOH HOH . O 6 HOH A 34 2034 2034 HOH HOH . O 6 HOH A 35 2035 2035 HOH HOH . O 6 HOH A 36 2036 2036 HOH HOH . O 6 HOH A 37 2037 2037 HOH HOH . O 6 HOH A 38 2038 2038 HOH HOH . O 6 HOH A 39 2039 2039 HOH HOH . O 6 HOH A 40 2040 2040 HOH HOH . O 6 HOH A 41 2041 2041 HOH HOH . O 6 HOH A 42 2042 2042 HOH HOH . O 6 HOH A 43 2043 2043 HOH HOH . O 6 HOH A 44 2044 2044 HOH HOH . O 6 HOH A 45 2045 2045 HOH HOH . O 6 HOH A 46 2046 2046 HOH HOH . O 6 HOH A 47 2047 2047 HOH HOH . O 6 HOH A 48 2048 2048 HOH HOH . O 6 HOH A 49 2049 2049 HOH HOH . O 6 HOH A 50 2050 2050 HOH HOH . O 6 HOH A 51 2051 2051 HOH HOH . O 6 HOH A 52 2052 2052 HOH HOH . O 6 HOH A 53 2053 2053 HOH HOH . O 6 HOH A 54 2054 2054 HOH HOH . O 6 HOH A 55 2055 2055 HOH HOH . O 6 HOH A 56 2056 2056 HOH HOH . O 6 HOH A 57 2057 2057 HOH HOH . O 6 HOH A 58 2058 2058 HOH HOH . O 6 HOH A 59 2059 2059 HOH HOH . O 6 HOH A 60 2060 2060 HOH HOH . O 6 HOH A 61 2061 2061 HOH HOH . O 6 HOH A 62 2062 2062 HOH HOH . O 6 HOH A 63 2063 2063 HOH HOH . O 6 HOH A 64 2064 2064 HOH HOH . O 6 HOH A 65 2065 2065 HOH HOH . O 6 HOH A 66 2066 2066 HOH HOH . O 6 HOH A 67 2067 2067 HOH HOH . O 6 HOH A 68 2068 2068 HOH HOH . O 6 HOH A 69 2069 2069 HOH HOH . O 6 HOH A 70 2070 2070 HOH HOH . O 6 HOH A 71 2071 2071 HOH HOH . O 6 HOH A 72 2072 2072 HOH HOH . O 6 HOH A 73 2073 2073 HOH HOH . O 6 HOH A 74 2074 2074 HOH HOH . O 6 HOH A 75 2075 2075 HOH HOH . O 6 HOH A 76 2076 2076 HOH HOH . O 6 HOH A 77 2077 2077 HOH HOH . O 6 HOH A 78 2078 2078 HOH HOH . O 6 HOH A 79 2079 2079 HOH HOH . O 6 HOH A 80 2080 2080 HOH HOH . O 6 HOH A 81 2081 2081 HOH HOH . O 6 HOH A 82 2082 2082 HOH HOH . O 6 HOH A 83 2083 2083 HOH HOH . O 6 HOH A 84 2084 2084 HOH HOH . O 6 HOH A 85 2085 2085 HOH HOH . O 6 HOH A 86 2086 2086 HOH HOH . O 6 HOH A 87 2087 2087 HOH HOH . O 6 HOH A 88 2088 2088 HOH HOH . O 6 HOH A 89 2089 2089 HOH HOH . P 6 HOH B 1 2001 2001 HOH HOH . P 6 HOH B 2 2002 2002 HOH HOH . P 6 HOH B 3 2003 2003 HOH HOH . P 6 HOH B 4 2004 2004 HOH HOH . P 6 HOH B 5 2005 2005 HOH HOH . P 6 HOH B 6 2006 2006 HOH HOH . P 6 HOH B 7 2007 2007 HOH HOH . P 6 HOH B 8 2008 2008 HOH HOH . P 6 HOH B 9 2009 2009 HOH HOH . P 6 HOH B 10 2010 2010 HOH HOH . P 6 HOH B 11 2011 2011 HOH HOH . P 6 HOH B 12 2012 2012 HOH HOH . P 6 HOH B 13 2013 2013 HOH HOH . P 6 HOH B 14 2014 2014 HOH HOH . P 6 HOH B 15 2015 2015 HOH HOH . P 6 HOH B 16 2016 2016 HOH HOH . P 6 HOH B 17 2017 2017 HOH HOH . P 6 HOH B 18 2018 2018 HOH HOH . P 6 HOH B 19 2019 2019 HOH HOH . P 6 HOH B 20 2020 2020 HOH HOH . P 6 HOH B 21 2021 2021 HOH HOH . P 6 HOH B 22 2022 2022 HOH HOH . P 6 HOH B 23 2023 2023 HOH HOH . P 6 HOH B 24 2024 2024 HOH HOH . P 6 HOH B 25 2025 2025 HOH HOH . P 6 HOH B 26 2026 2026 HOH HOH . P 6 HOH B 27 2027 2027 HOH HOH . P 6 HOH B 28 2028 2028 HOH HOH . P 6 HOH B 29 2029 2029 HOH HOH . P 6 HOH B 30 2030 2030 HOH HOH . P 6 HOH B 31 2031 2031 HOH HOH . P 6 HOH B 32 2032 2032 HOH HOH . P 6 HOH B 33 2033 2033 HOH HOH . P 6 HOH B 34 2034 2034 HOH HOH . P 6 HOH B 35 2035 2035 HOH HOH . P 6 HOH B 36 2036 2036 HOH HOH . P 6 HOH B 37 2037 2037 HOH HOH . P 6 HOH B 38 2038 2038 HOH HOH . P 6 HOH B 39 2039 2039 HOH HOH . P 6 HOH B 40 2040 2040 HOH HOH . P 6 HOH B 41 2041 2041 HOH HOH . P 6 HOH B 42 2042 2042 HOH HOH . P 6 HOH B 43 2043 2043 HOH HOH . P 6 HOH B 44 2044 2044 HOH HOH . P 6 HOH B 45 2045 2045 HOH HOH . P 6 HOH B 46 2046 2046 HOH HOH . P 6 HOH B 47 2047 2047 HOH HOH . P 6 HOH B 48 2048 2048 HOH HOH . P 6 HOH B 49 2049 2049 HOH HOH . P 6 HOH B 50 2050 2050 HOH HOH . P 6 HOH B 51 2051 2051 HOH HOH . P 6 HOH B 52 2052 2052 HOH HOH . P 6 HOH B 53 2053 2053 HOH HOH . P 6 HOH B 54 2054 2054 HOH HOH . P 6 HOH B 55 2055 2055 HOH HOH . P 6 HOH B 56 2056 2056 HOH HOH . P 6 HOH B 57 2057 2057 HOH HOH . P 6 HOH B 58 2058 2058 HOH HOH . P 6 HOH B 59 2059 2059 HOH HOH . P 6 HOH B 60 2060 2060 HOH HOH . P 6 HOH B 61 2061 2061 HOH HOH . P 6 HOH B 62 2062 2062 HOH HOH . P 6 HOH B 63 2063 2063 HOH HOH . P 6 HOH B 64 2064 2064 HOH HOH . P 6 HOH B 65 2065 2065 HOH HOH . P 6 HOH B 66 2066 2066 HOH HOH . P 6 HOH B 67 2067 2067 HOH HOH . P 6 HOH B 68 2068 2068 HOH HOH . P 6 HOH B 69 2069 2069 HOH HOH . P 6 HOH B 70 2070 2070 HOH HOH . P 6 HOH B 71 2071 2071 HOH HOH . P 6 HOH B 72 2072 2072 HOH HOH . P 6 HOH B 73 2073 2073 HOH HOH . P 6 HOH B 74 2074 2074 HOH HOH . P 6 HOH B 75 2075 2075 HOH HOH . P 6 HOH B 76 2076 2076 HOH HOH . P 6 HOH B 77 2077 2077 HOH HOH . P 6 HOH B 78 2078 2078 HOH HOH . P 6 HOH B 79 2079 2079 HOH HOH . P 6 HOH B 80 2080 2080 HOH HOH . P 6 HOH B 81 2081 2081 HOH HOH . P 6 HOH B 82 2082 2082 HOH HOH . P 6 HOH B 83 2083 2083 HOH HOH . P 6 HOH B 84 2084 2084 HOH HOH . P 6 HOH B 85 2085 2085 HOH HOH . P 6 HOH B 86 2086 2086 HOH HOH . P 6 HOH B 87 2087 2087 HOH HOH . P 6 HOH B 88 2088 2088 HOH HOH . P 6 HOH B 89 2089 2089 HOH HOH . P 6 HOH B 90 2090 2090 HOH HOH . P 6 HOH B 91 2091 2091 HOH HOH . P 6 HOH B 92 2092 2092 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA CYC . . . D 3 -1.112 -34.766 -11.655 1 31.56 ? CHA CYC 1422 A 1 HETATM 2 N NA CYC . . . D 3 -1.355 -32.654 -10.359 1 31.27 ? NA CYC 1422 A 1 HETATM 3 C C1A CYC . . . D 3 -0.681 -33.423 -11.3 1 30.23 ? C1A CYC 1422 A 1 HETATM 4 C C2A CYC . . . D 3 0.45 -32.835 -11.909 1 46.99 ? C2A CYC 1422 A 1 HETATM 5 C C3A CYC . . . D 3 0.582 -31.492 -11.317 1 45.77 ? C3A CYC 1422 A 1 HETATM 6 C C4A CYC . . . D 3 -0.608 -31.376 -10.31 1 30.83 ? C4A CYC 1422 A 1 HETATM 7 C CMA CYC . . . D 3 1.614 -30.494 -11.627 1 46.22 ? CMA CYC 1422 A 1 HETATM 8 C CAA CYC . . . D 3 1.354 -33.437 -12.937 1 38.2 ? CAA CYC 1422 A 1 HETATM 9 C CBA CYC . . . D 3 1.187 -32.996 -14.306 1 42.73 ? CBA CYC 1422 A 1 HETATM 10 C CGA CYC . . . D 3 -0.231 -33.089 -14.854 1 45.11 ? CGA CYC 1422 A 1 HETATM 11 O O1A CYC . . . D 3 -0.905 -34.223 -14.711 1 43.38 ? O1A CYC 1422 A 1 HETATM 12 O O2A CYC . . . D 3 -0.775 -32.054 -15.454 1 51.97 ? O2A CYC 1422 A 1 HETATM 13 C CHB CYC . . . D 3 -0.944 -30.203 -9.418 1 38.22 ? CHB CYC 1422 A 1 HETATM 14 N NB CYC . . . D 3 -0.811 -28.47 -11.117 1 36.01 ? NB CYC 1422 A 1 HETATM 15 C C1B CYC . . . D 3 -0.785 -28.872 -9.82 1 27.18 ? C1B CYC 1422 A 1 HETATM 16 C C2B CYC . . . D 3 -0.569 -27.775 -8.811 1 26.41 ? C2B CYC 1422 A 1 HETATM 17 C C3B CYC . . . D 3 -0.451 -26.511 -9.735 1 34.23 ? C3B CYC 1422 A 1 HETATM 18 C C4B CYC . . . D 3 -0.622 -27.12 -11.099 1 26.75 ? C4B CYC 1422 A 1 HETATM 19 C CMB CYC . . . D 3 -0.479 -27.869 -7.247 1 32.69 ? CMB CYC 1422 A 1 HETATM 20 C CAB CYC . . . D 3 -0.231 -25.084 -9.342 1 44.96 ? CAB CYC 1422 A 1 HETATM 21 C CBB CYC . . . D 3 0.933 -24.371 -9.944 1 56.09 ? CBB CYC 1422 A 1 HETATM 22 O OB CYC . . . D 3 -0.596 -26.471 -12.089 1 41.63 ? OB CYC 1422 A 1 HETATM 23 N NC CYC . . . D 3 -4.701 -34.669 -7.204 1 44.33 ? NC CYC 1422 A 1 HETATM 24 C C1C CYC . . . D 3 -5.299 -34.213 -5.996 1 41.17 ? C1C CYC 1422 A 1 HETATM 25 C C2C CYC . . . D 3 -5.796 -35.273 -5.058 1 35.01 ? C2C CYC 1422 A 1 HETATM 26 C C3C CYC . . . D 3 -5.455 -36.617 -5.882 1 41.57 ? C3C CYC 1422 A 1 HETATM 27 C C4C CYC . . . D 3 -4.641 -36.071 -7.012 1 34.52 ? C4C CYC 1422 A 1 HETATM 28 C CMC CYC . . . D 3 -5.278 -35.148 -3.645 1 34.96 ? CMC CYC 1422 A 1 HETATM 29 C CAC CYC . . . D 3 -6.619 -37.402 -6.26 1 47.31 ? CAC CYC 1422 A 1 HETATM 30 C CBC CYC . . . D 3 -7.363 -37.895 -5.008 1 44.53 ? CBC CYC 1422 A 1 HETATM 31 O OC CYC . . . D 3 -5.404 -33.041 -5.736 1 32.62 ? OC CYC 1422 A 1 HETATM 32 C CHD CYC . . . D 3 -3.873 -36.952 -7.787 1 37.25 ? CHD CYC 1422 A 1 HETATM 33 N ND CYC . . . D 3 -2.488 -35.505 -9.528 1 32.57 ? ND CYC 1422 A 1 HETATM 34 C C1D CYC . . . D 3 -3.093 -36.641 -9.109 1 37.12 ? C1D CYC 1422 A 1 HETATM 35 C C2D CYC . . . D 3 -2.898 -37.619 -10.071 1 38.77 ? C2D CYC 1422 A 1 HETATM 36 C C3D CYC . . . D 3 -2.165 -37.047 -11.09 1 43.8 ? C3D CYC 1422 A 1 HETATM 37 C C4D CYC . . . D 3 -1.919 -35.728 -10.736 1 46.69 ? C4D CYC 1422 A 1 HETATM 38 C CMD CYC . . . D 3 -3.397 -39.031 -10.012 1 40.28 ? CMD CYC 1422 A 1 HETATM 39 C CAD CYC . . . D 3 -1.708 -37.755 -12.409 1 41.82 ? CAD CYC 1422 A 1 HETATM 40 C CBD CYC . . . D 3 -2.556 -37.559 -13.595 1 43.96 ? CBD CYC 1422 A 1 HETATM 41 C CGD CYC . . . D 3 -2.648 -38.67 -14.579 1 54.32 ? CGD CYC 1422 A 1 HETATM 42 O O1D CYC . . . D 3 -2.67 -39.905 -14.169 1 59.82 ? O1D CYC 1422 A 1 HETATM 43 O O2D CYC . . . D 3 -2.706 -38.423 -15.769 1 66.37 ? O2D CYC 1422 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #