data_4BZC # _model_server_result.job_id XJDI8rAWP3TZW23Xivxl5A _model_server_result.datetime_utc '2024-11-07 02:44:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4bzc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":750}' # _entry.id 4BZC # _exptl.entry_id 4BZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.56 _cell.angle_gamma 90 _cell.entry_id 4BZC _cell.length_a 79.002 _cell.length_b 138.727 _cell.length_c 93.715 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 K N N ? 3 P N N ? 3 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 91 A HIS 167 1_555 F MN MN . A MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc2 A NE2 HIS 130 A HIS 206 1_555 F MN MN . A MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc3 A OD2 ASP 131 A ASP 207 1_555 F MN MN . A MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc4 A OD1 ASP 235 A ASP 311 1_555 F MN MN . A MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc5 A OD2 ASP 235 A ASP 311 1_555 F MN MN . A MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc6 G O3G T8T . A T8T 800 1_555 I MG MG . A MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc7 G O2B T8T . A T8T 800 1_555 I MG MG . A MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.63 ? metalc ? metalc8 H O2B T8T . A T8T 900 1_555 I MG MG . A MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.67 ? metalc ? metalc9 H O1G T8T . A T8T 900 1_555 I MG MG . A MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc10 H O2A T8T . A T8T 900 1_555 I MG MG . A MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc11 I MG MG . A MG 950 1_555 Y O HOH . A HOH 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc12 B NE2 HIS 91 B HIS 167 1_555 K MN MN . B MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc13 B NE2 HIS 130 B HIS 206 1_555 K MN MN . B MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc14 B OD2 ASP 131 B ASP 207 1_555 K MN MN . B MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc15 B OD1 ASP 235 B ASP 311 1_555 K MN MN . B MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc16 B OD2 ASP 235 B ASP 311 1_555 K MN MN . B MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc17 L O3G T8T . B T8T 800 1_555 N MG MG . B MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc18 L O2B T8T . B T8T 800 1_555 N MG MG . B MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc19 M O2A T8T . B T8T 900 1_555 N MG MG . B MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc20 M O2B T8T . B T8T 900 1_555 N MG MG . B MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc21 M O1G T8T . B T8T 900 1_555 N MG MG . B MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.77 ? metalc ? metalc22 C NE2 HIS 91 C HIS 167 1_555 P MN MN . C MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc23 C NE2 HIS 130 C HIS 206 1_555 P MN MN . C MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc24 C OD2 ASP 131 C ASP 207 1_555 P MN MN . C MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc25 C OD2 ASP 235 C ASP 311 1_555 P MN MN . C MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc26 C OD1 ASP 235 C ASP 311 1_555 P MN MN . C MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc27 Q O3G T8T . C T8T 800 1_555 S MG MG . C MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc28 Q O2B T8T . C T8T 800 1_555 S MG MG . C MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc29 R O2B T8T . C T8T 900 1_555 S MG MG . C MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc30 R O1G T8T . C T8T 900 1_555 S MG MG . C MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc31 R O2A T8T . C T8T 900 1_555 S MG MG . C MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc32 D NE2 HIS 91 D HIS 167 1_555 U MN MN . D MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc33 D NE2 HIS 130 D HIS 206 1_555 U MN MN . D MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc34 D OD2 ASP 131 D ASP 207 1_555 U MN MN . D MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc35 D OD2 ASP 235 D ASP 311 1_555 U MN MN . D MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc36 D OD1 ASP 235 D ASP 311 1_555 U MN MN . D MN 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.888 ? metalc ? metalc37 V O2B T8T . D T8T 800 1_555 X MG MG . D MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc38 V O3G T8T . D T8T 800 1_555 X MG MG . D MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc39 W O2A T8T . D T8T 900 1_555 X MG MG . D MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc40 W O2B T8T . D T8T 900 1_555 X MG MG . D MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc41 W O1G T8T . D T8T 900 1_555 X MG MG . D MG 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4BZC _atom_sites.fract_transf_matrix[1][1] 0.012658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00552 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011641 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 T8T A 1 700 700 T8T T8T . F 3 MN A 1 750 750 MN MN . G 2 T8T A 1 800 800 T8T T8T . H 2 T8T A 1 900 900 T8T T8T . I 4 MG A 1 950 950 MG MG . J 2 T8T B 1 700 700 T8T T8T . K 3 MN B 1 750 750 MN MN . L 2 T8T B 1 800 800 T8T T8T . M 2 T8T B 1 900 900 T8T T8T . N 4 MG B 1 950 950 MG MG . O 2 T8T C 1 700 700 T8T T8T . P 3 MN C 1 750 750 MN MN . Q 2 T8T C 1 800 800 T8T T8T . R 2 T8T C 1 900 900 T8T T8T . S 4 MG C 1 950 950 MG MG . T 2 T8T D 1 700 700 T8T T8T . U 3 MN D 1 750 750 MN MN . V 2 T8T D 1 800 800 T8T T8T . W 2 T8T D 1 900 900 T8T T8T . X 4 MG D 1 950 950 MG MG . Y 5 HOH A 1 2001 2001 HOH HOH . Y 5 HOH A 2 2002 2002 HOH HOH . Y 5 HOH A 3 2003 2003 HOH HOH . Y 5 HOH A 4 2004 2004 HOH HOH . Y 5 HOH A 5 2005 2005 HOH HOH . Y 5 HOH A 6 2006 2006 HOH HOH . Y 5 HOH A 7 2007 2007 HOH HOH . Y 5 HOH A 8 2008 2008 HOH HOH . Y 5 HOH A 9 2009 2009 HOH HOH . Y 5 HOH A 10 2010 2010 HOH HOH . Y 5 HOH A 11 2011 2011 HOH HOH . Y 5 HOH A 12 2012 2012 HOH HOH . Y 5 HOH A 13 2013 2013 HOH HOH . Y 5 HOH A 14 2014 2014 HOH HOH . Z 5 HOH B 1 2001 2001 HOH HOH . Z 5 HOH B 2 2002 2002 HOH HOH . Z 5 HOH B 3 2003 2003 HOH HOH . Z 5 HOH B 4 2004 2004 HOH HOH . Z 5 HOH B 5 2005 2005 HOH HOH . Z 5 HOH B 6 2006 2006 HOH HOH . Z 5 HOH B 7 2007 2007 HOH HOH . Z 5 HOH B 8 2008 2008 HOH HOH . Z 5 HOH B 9 2009 2009 HOH HOH . AA 5 HOH C 1 2001 2001 HOH HOH . AA 5 HOH C 2 2002 2002 HOH HOH . AA 5 HOH C 3 2003 2003 HOH HOH . AA 5 HOH C 4 2004 2004 HOH HOH . AA 5 HOH C 5 2005 2005 HOH HOH . AA 5 HOH C 6 2006 2006 HOH HOH . AA 5 HOH C 7 2007 2007 HOH HOH . BA 5 HOH D 1 2001 2001 HOH HOH . BA 5 HOH D 2 2002 2002 HOH HOH . BA 5 HOH D 3 2003 2003 HOH HOH . BA 5 HOH D 4 2004 2004 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 48.086 _atom_site.Cartn_y 21.066 _atom_site.Cartn_z 9.404 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 750 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #