data_4C1A
#
_model_server_result.job_id            pWk9-sVM_c8kYmOls_i5qA 
_model_server_result.datetime_utc      '2024-12-21 14:22:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4c1a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1047}' 
#
_entry.id    4C1A 
#
_exptl.entry_id    4C1A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.78 
_cell.angle_gamma         90 
_cell.entry_id            4C1A 
_cell.length_a            23.73 
_cell.length_b            52.42 
_cell.length_c            51.83 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4C1A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,J,K 1 1 
C,D,F,G,H,I,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 85 n n 
C1 C2 GOL sing 86 n n 
C1 H11 GOL sing 87 n n 
C1 H12 GOL sing 88 n n 
O1 HO1 GOL sing 89 n n 
C2 O2 GOL sing 90 n n 
C2 C3 GOL sing 91 n n 
C2 H2 GOL sing 92 n n 
O2 HO2 GOL sing 93 n n 
C3 O3 GOL sing 94 n n 
C3 H31 GOL sing 95 n n 
C3 H32 GOL sing 96 n n 
O3 HO3 GOL sing 97 n n 
#
_atom_sites.entry_id                     4C1A 
_atom_sites.fract_transf_matrix[1][1]    0.042141 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007264 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019077 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019578 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GOL A 1 1048 1048 GOL GOL . 
F 2 GOL C 1 1047 1047 GOL GOL . 
G 2 GOL C 1 1048 1048 GOL GOL . 
H 2 GOL D 1 1046 1046 GOL GOL . 
I 2 GOL D 1 1047 1047 GOL GOL . 
J 3 HOH A 1 2001 2001 HOH HOH . 
J 3 HOH A 2 2002 2002 HOH HOH . 
J 3 HOH A 3 2003 2003 HOH HOH . 
J 3 HOH A 4 2004 2004 HOH HOH . 
J 3 HOH A 5 2005 2005 HOH HOH . 
J 3 HOH A 6 2006 2006 HOH HOH . 
J 3 HOH A 7 2007 2007 HOH HOH . 
J 3 HOH A 8 2008 2008 HOH HOH . 
J 3 HOH A 9 2009 2009 HOH HOH . 
J 3 HOH A 10 2010 2010 HOH HOH . 
J 3 HOH A 11 2011 2011 HOH HOH . 
J 3 HOH A 12 2012 2012 HOH HOH . 
J 3 HOH A 13 2013 2013 HOH HOH . 
J 3 HOH A 14 2014 2014 HOH HOH . 
J 3 HOH A 15 2015 2015 HOH HOH . 
J 3 HOH A 16 2016 2016 HOH HOH . 
J 3 HOH A 17 2017 2017 HOH HOH . 
J 3 HOH A 18 2018 2018 HOH HOH . 
J 3 HOH A 19 2019 2019 HOH HOH . 
J 3 HOH A 20 2020 2020 HOH HOH . 
J 3 HOH A 21 2021 2021 HOH HOH . 
J 3 HOH A 22 2022 2022 HOH HOH . 
J 3 HOH A 23 2023 2023 HOH HOH . 
J 3 HOH A 24 2024 2024 HOH HOH . 
J 3 HOH A 25 2025 2025 HOH HOH . 
J 3 HOH A 26 2026 2026 HOH HOH . 
J 3 HOH A 27 2027 2027 HOH HOH . 
J 3 HOH A 28 2028 2028 HOH HOH . 
J 3 HOH A 29 2029 2029 HOH HOH . 
J 3 HOH A 30 2030 2030 HOH HOH . 
J 3 HOH A 31 2031 2031 HOH HOH . 
J 3 HOH A 32 2032 2032 HOH HOH . 
J 3 HOH A 33 2033 2033 HOH HOH . 
J 3 HOH A 34 2034 2034 HOH HOH . 
K 3 HOH B 1 2001 2001 HOH HOH . 
K 3 HOH B 2 2002 2002 HOH HOH . 
K 3 HOH B 3 2003 2003 HOH HOH . 
K 3 HOH B 4 2004 2004 HOH HOH . 
K 3 HOH B 5 2005 2005 HOH HOH . 
K 3 HOH B 6 2006 2006 HOH HOH . 
K 3 HOH B 7 2007 2007 HOH HOH . 
K 3 HOH B 8 2008 2008 HOH HOH . 
K 3 HOH B 9 2009 2009 HOH HOH . 
K 3 HOH B 10 2010 2010 HOH HOH . 
K 3 HOH B 11 2011 2011 HOH HOH . 
K 3 HOH B 12 2012 2012 HOH HOH . 
K 3 HOH B 13 2013 2013 HOH HOH . 
K 3 HOH B 14 2014 2014 HOH HOH . 
K 3 HOH B 15 2015 2015 HOH HOH . 
K 3 HOH B 16 2016 2016 HOH HOH . 
K 3 HOH B 17 2017 2017 HOH HOH . 
K 3 HOH B 18 2018 2018 HOH HOH . 
K 3 HOH B 19 2019 2019 HOH HOH . 
K 3 HOH B 20 2020 2020 HOH HOH . 
K 3 HOH B 21 2021 2021 HOH HOH . 
K 3 HOH B 22 2022 2022 HOH HOH . 
L 3 HOH C 1 2001 2001 HOH HOH . 
L 3 HOH C 2 2002 2002 HOH HOH . 
L 3 HOH C 3 2003 2003 HOH HOH . 
L 3 HOH C 4 2004 2004 HOH HOH . 
L 3 HOH C 5 2005 2005 HOH HOH . 
L 3 HOH C 6 2006 2006 HOH HOH . 
L 3 HOH C 7 2007 2007 HOH HOH . 
L 3 HOH C 8 2008 2008 HOH HOH . 
L 3 HOH C 9 2009 2009 HOH HOH . 
L 3 HOH C 10 2010 2010 HOH HOH . 
L 3 HOH C 11 2011 2011 HOH HOH . 
L 3 HOH C 12 2012 2012 HOH HOH . 
L 3 HOH C 13 2013 2013 HOH HOH . 
L 3 HOH C 14 2014 2014 HOH HOH . 
L 3 HOH C 15 2015 2015 HOH HOH . 
L 3 HOH C 16 2016 2016 HOH HOH . 
L 3 HOH C 17 2017 2017 HOH HOH . 
L 3 HOH C 18 2018 2018 HOH HOH . 
L 3 HOH C 19 2019 2019 HOH HOH . 
L 3 HOH C 20 2020 2020 HOH HOH . 
L 3 HOH C 21 2021 2021 HOH HOH . 
L 3 HOH C 22 2022 2022 HOH HOH . 
L 3 HOH C 23 2023 2023 HOH HOH . 
L 3 HOH C 24 2024 2024 HOH HOH . 
L 3 HOH C 25 2025 2025 HOH HOH . 
L 3 HOH C 26 2026 2026 HOH HOH . 
L 3 HOH C 27 2027 2027 HOH HOH . 
L 3 HOH C 28 2028 2028 HOH HOH . 
L 3 HOH C 29 2029 2029 HOH HOH . 
L 3 HOH C 30 2030 2030 HOH HOH . 
M 3 HOH D 1 2001 2001 HOH HOH . 
M 3 HOH D 2 2002 2002 HOH HOH . 
M 3 HOH D 3 2003 2003 HOH HOH . 
M 3 HOH D 4 2004 2004 HOH HOH . 
M 3 HOH D 5 2005 2005 HOH HOH . 
M 3 HOH D 6 2006 2006 HOH HOH . 
M 3 HOH D 7 2007 2007 HOH HOH . 
M 3 HOH D 8 2008 2008 HOH HOH . 
M 3 HOH D 9 2009 2009 HOH HOH . 
M 3 HOH D 10 2010 2010 HOH HOH . 
M 3 HOH D 11 2011 2011 HOH HOH . 
M 3 HOH D 12 2012 2012 HOH HOH . 
M 3 HOH D 13 2013 2013 HOH HOH . 
M 3 HOH D 14 2014 2014 HOH HOH . 
M 3 HOH D 15 2015 2015 HOH HOH . 
M 3 HOH D 16 2016 2016 HOH HOH . 
M 3 HOH D 17 2017 2017 HOH HOH . 
M 3 HOH D 18 2018 2018 HOH HOH . 
M 3 HOH D 19 2019 2019 HOH HOH . 
M 3 HOH D 20 2020 2020 HOH HOH . 
M 3 HOH D 21 2021 2021 HOH HOH . 
M 3 HOH D 22 2022 2022 HOH HOH . 
M 3 HOH D 23 2023 2023 HOH HOH . 
M 3 HOH D 24 2024 2024 HOH HOH . 
M 3 HOH D 25 2025 2025 HOH HOH . 
M 3 HOH D 26 2026 2026 HOH HOH . 
M 3 HOH D 27 2027 2027 HOH HOH . 
M 3 HOH D 28 2028 2028 HOH HOH . 
M 3 HOH D 29 2029 2029 HOH HOH . 
M 3 HOH D 30 2030 2030 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 2 1.107 48.485 46.056 1 44.26 ? C1 GOL 1047 C 1 
HETATM 2 O O1 GOL . . . F 2 1.242 47.369 45.185 1 23.49 ? O1 GOL 1047 C 1 
HETATM 3 C C2 GOL . . . F 2 2.246 48.702 47.038 1 47.74 ? C2 GOL 1047 C 1 
HETATM 4 O O2 GOL . . . F 2 3.461 48.375 46.391 1 52.89 ? O2 GOL 1047 C 1 
HETATM 5 C C3 GOL . . . F 2 2.215 50.115 47.625 1 45 ? C3 GOL 1047 C 1 
HETATM 6 O O3 GOL . . . F 2 1.995 50.131 49.025 1 44.9 ? O3 GOL 1047 C 1 
HETATM 7 H H11 GOL . . . F 2 0.999 49.384 45.45 1 53.11 ? H11 GOL 1047 C 1 
HETATM 8 H H12 GOL . . . F 2 0.183 48.37 46.622 1 53.11 ? H12 GOL 1047 C 1 
HETATM 9 H HO1 GOL . . . F 2 0.432 47.279 44.642 1 28.19 ? HO1 GOL 1047 C 1 
HETATM 10 H H2 GOL . . . F 2 2.099 48.006 47.864 1 57.29 ? H2 GOL 1047 C 1 
HETATM 11 H HO2 GOL . . . F 2 3.621 49.006 45.658 1 63.47 ? HO2 GOL 1047 C 1 
HETATM 12 H H31 GOL . . . F 2 3.161 50.612 47.408 1 54 ? H31 GOL 1047 C 1 
HETATM 13 H H32 GOL . . . F 2 1.426 50.686 47.135 1 54 ? H32 GOL 1047 C 1 
HETATM 14 H HO3 GOL . . . F 2 2.014 51.055 49.349 1 53.88 ? HO3 GOL 1047 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#