data_4C2B
#
_model_server_result.job_id            tlttUFOX3xYzjpfMx5Ux7g 
_model_server_result.datetime_utc      '2024-10-12 12:27:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4c2b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":2468}' 
#
_entry.id    4C2B 
#
_exptl.entry_id    4C2B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.05 
_cell.angle_gamma         90 
_cell.entry_id            4C2B 
_cell.length_a            96.53 
_cell.length_b            103.84 
_cell.length_c            119.93 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4C2B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 author_and_software_defined_assembly 1 
PQS dimeric 2 author_and_software_defined_assembly 2 
PQS dimeric 2 author_and_software_defined_assembly 3 
PQS dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,U,V 1 1 
C,D,L,M,W,X 2 1 
E,F,N,O,Y,Z 3 1 
G,H,P,Q,R,S,T,AA,BA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             R 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 A CYS 1271 1_555 A SG CYS 196 A CYS 1458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 4 B CYS 4 1_555 B SG CYS 17 B CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 209 B CYS 209 1_555 B SG CYS 248 B CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 211 B CYS 211 1_555 B SG CYS 264 B CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 C SG CYS 9 C CYS 1271 1_555 C SG CYS 196 C CYS 1458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 D SG CYS 4 D CYS 4 1_555 D SG CYS 17 D CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf7 D SG CYS 209 D CYS 209 1_555 D SG CYS 248 D CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf8 D SG CYS 211 D CYS 211 1_555 D SG CYS 264 D CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf9 E SG CYS 9 E CYS 1271 1_555 E SG CYS 196 E CYS 1458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf10 F SG CYS 4 F CYS 4 1_555 F SG CYS 17 F CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf11 F SG CYS 209 F CYS 209 1_555 F SG CYS 248 F CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf12 F SG CYS 211 F CYS 211 1_555 F SG CYS 264 F CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf13 G SG CYS 9 G CYS 1271 1_555 G SG CYS 196 G CYS 1458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf14 H SG CYS 4 H CYS 4 1_555 H SG CYS 17 H CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf15 H SG CYS 209 H CYS 209 1_555 H SG CYS 248 H CYS 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf16 H SG CYS 211 H CYS 211 1_555 H SG CYS 264 H CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 262 n n 
C1 C2 PEG sing 263 n n 
C1 H11 PEG sing 264 n n 
C1 H12 PEG sing 265 n n 
O1 HO1 PEG sing 266 n n 
C2 O2 PEG sing 267 n n 
C2 H21 PEG sing 268 n n 
C2 H22 PEG sing 269 n n 
O2 C3 PEG sing 270 n n 
C3 C4 PEG sing 271 n n 
C3 H31 PEG sing 272 n n 
C3 H32 PEG sing 273 n n 
C4 O4 PEG sing 274 n n 
C4 H41 PEG sing 275 n n 
C4 H42 PEG sing 276 n n 
O4 HO4 PEG sing 277 n n 
#
_atom_sites.entry_id                     4C2B 
_atom_sites.fract_transf_matrix[1][1]    0.010359 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000009 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00963 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008338 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 SO4 A 1 2266 2266 SO4 SO4 . 
J 4 MES A 1 2466 2466 MES MES . 
K 3 SO4 B 1 1266 1266 SO4 SO4 . 
L 3 SO4 C 1 2467 2467 SO4 SO4 . 
M 3 SO4 D 1 1266 1266 SO4 SO4 . 
N 3 SO4 E 1 2466 2466 SO4 SO4 . 
O 3 SO4 F 1 1266 1266 SO4 SO4 . 
P 3 SO4 G 1 2466 2466 SO4 SO4 . 
Q 3 SO4 G 1 2467 2467 SO4 SO4 . 
R 5 PEG G 1 2468 2468 PEG PEG . 
S 3 SO4 H 1 1266 1266 SO4 SO4 . 
T 3 SO4 H 1 1267 1267 SO4 SO4 . 
U 6 HOH A 1 2001 2001 HOH HOH . 
U 6 HOH A 2 2002 2002 HOH HOH . 
U 6 HOH A 3 2003 2003 HOH HOH . 
U 6 HOH A 4 2004 2004 HOH HOH . 
U 6 HOH A 5 2005 2005 HOH HOH . 
V 6 HOH B 1 2001 2001 HOH HOH . 
V 6 HOH B 2 2002 2002 HOH HOH . 
V 6 HOH B 3 2003 2003 HOH HOH . 
V 6 HOH B 4 2004 2004 HOH HOH . 
V 6 HOH B 5 2005 2005 HOH HOH . 
W 6 HOH C 1 2001 2001 HOH HOH . 
W 6 HOH C 2 2002 2002 HOH HOH . 
W 6 HOH C 3 2003 2003 HOH HOH . 
X 6 HOH D 1 2001 2001 HOH HOH . 
X 6 HOH D 2 2002 2002 HOH HOH . 
X 6 HOH D 3 2003 2003 HOH HOH . 
X 6 HOH D 4 2004 2004 HOH HOH . 
X 6 HOH D 5 2005 2005 HOH HOH . 
X 6 HOH D 6 2006 2006 HOH HOH . 
X 6 HOH D 7 2007 2007 HOH HOH . 
X 6 HOH D 8 2008 2008 HOH HOH . 
X 6 HOH D 9 2009 2009 HOH HOH . 
X 6 HOH D 10 2010 2010 HOH HOH . 
X 6 HOH D 11 2011 2011 HOH HOH . 
X 6 HOH D 12 2012 2012 HOH HOH . 
X 6 HOH D 13 2013 2013 HOH HOH . 
X 6 HOH D 14 2014 2014 HOH HOH . 
Y 6 HOH E 1 2001 2001 HOH HOH . 
Y 6 HOH E 2 2002 2002 HOH HOH . 
Y 6 HOH E 3 2003 2003 HOH HOH . 
Y 6 HOH E 4 2004 2004 HOH HOH . 
Y 6 HOH E 5 2005 2005 HOH HOH . 
Y 6 HOH E 6 2006 2006 HOH HOH . 
Y 6 HOH E 7 2007 2007 HOH HOH . 
Y 6 HOH E 8 2008 2008 HOH HOH . 
Y 6 HOH E 9 2009 2009 HOH HOH . 
Z 6 HOH F 1 2001 2001 HOH HOH . 
Z 6 HOH F 2 2002 2002 HOH HOH . 
Z 6 HOH F 3 2003 2003 HOH HOH . 
Z 6 HOH F 4 2004 2004 HOH HOH . 
Z 6 HOH F 5 2005 2005 HOH HOH . 
Z 6 HOH F 6 2006 2006 HOH HOH . 
Z 6 HOH F 7 2007 2007 HOH HOH . 
Z 6 HOH F 8 2008 2008 HOH HOH . 
Z 6 HOH F 9 2009 2009 HOH HOH . 
Z 6 HOH F 10 2010 2010 HOH HOH . 
Z 6 HOH F 11 2011 2011 HOH HOH . 
AA 6 HOH G 1 2001 2001 HOH HOH . 
AA 6 HOH G 2 2002 2002 HOH HOH . 
AA 6 HOH G 3 2003 2003 HOH HOH . 
AA 6 HOH G 4 2004 2004 HOH HOH . 
AA 6 HOH G 5 2005 2005 HOH HOH . 
AA 6 HOH G 6 2006 2006 HOH HOH . 
AA 6 HOH G 7 2007 2007 HOH HOH . 
AA 6 HOH G 8 2008 2008 HOH HOH . 
AA 6 HOH G 9 2009 2009 HOH HOH . 
BA 6 HOH H 1 2001 2001 HOH HOH . 
BA 6 HOH H 2 2002 2002 HOH HOH . 
BA 6 HOH H 3 2003 2003 HOH HOH . 
BA 6 HOH H 4 2004 2004 HOH HOH . 
BA 6 HOH H 5 2005 2005 HOH HOH . 
BA 6 HOH H 6 2006 2006 HOH HOH . 
BA 6 HOH H 7 2007 2007 HOH HOH . 
BA 6 HOH H 8 2008 2008 HOH HOH . 
BA 6 HOH H 9 2009 2009 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . R 5 43.49 29.024 8.563 1 44.64 ? C1 PEG 2468 G 1 
HETATM 2 O O1 PEG . . . R 5 43.496 30.199 7.836 1 33.9 ? O1 PEG 2468 G 1 
HETATM 3 C C2 PEG . . . R 5 42.203 28.891 9.307 1 54.83 ? C2 PEG 2468 G 1 
HETATM 4 O O2 PEG . . . R 5 41.157 28.73 8.42 1 60.53 ? O2 PEG 2468 G 1 
HETATM 5 C C3 PEG . . . R 5 41.166 27.678 7.528 1 58.94 ? C3 PEG 2468 G 1 
HETATM 6 C C4 PEG . . . R 5 40.067 27.862 6.538 1 50.3 ? C4 PEG 2468 G 1 
HETATM 7 O O4 PEG . . . R 5 40.136 26.872 5.579 1 46.78 ? O4 PEG 2468 G 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           7 
#