data_4C3Q # _model_server_result.job_id O42PII0QnsaTwu01u6NSdA _model_server_result.datetime_utc '2025-03-06 22:14:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4c3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 4C3Q # _exptl.entry_id 4C3Q _exptl.method 'NEUTRON DIFFRACTION' # _entity.details ? _entity.formula_weight 178.016 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZO[B]THIOPHENE-2-BORONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4C3Q _cell.length_a 72.889 _cell.length_b 72.889 _cell.length_c 98.189 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4C3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 43 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id B _struct_conn.ptnr2_label_comp_id BZB _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BZB _struct_conn.ptnr2_auth_seq_id 300 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.45 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H7 B O2 S' _chem_comp.formula_weight 178.016 _chem_comp.id BZB _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZO[B]THIOPHENE-2-BORONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B O1 BZB sing 70 n n B O2 BZB sing 71 n n B C1 BZB sing 72 n n O1 HO11 BZB sing 73 n n O2 HO21 BZB sing 74 n n C1 C2 BZB doub 75 n y C1 S BZB sing 76 n y C2 C3 BZB sing 77 n y C2 HC21 BZB sing 78 n n C8 C3 BZB doub 79 n y C8 C7 BZB sing 80 n y C8 S BZB sing 81 n y C3 C4 BZB sing 82 n y C7 C6 BZB doub 83 n y C7 HC71 BZB sing 84 n n C4 C5 BZB doub 85 n y C4 HC41 BZB sing 86 n n C6 C5 BZB sing 87 n y C6 HC61 BZB sing 88 n n C5 HC51 BZB sing 89 n n # _atom_sites.entry_id 4C3Q _atom_sites.fract_transf_matrix[1][1] 0.013719 _atom_sites.fract_transf_matrix[1][2] 0.007921 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015842 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010184 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BZB A 1 300 300 BZB BZB . C 3 DOD A 1 1001 1001 DOD DOD . C 3 DOD A 2 1002 1002 DOD DOD . C 3 DOD A 3 1003 1003 DOD DOD . C 3 DOD A 4 1005 1005 DOD DOD . C 3 DOD A 5 1006 1006 DOD DOD . C 3 DOD A 6 1007 1007 DOD DOD . C 3 DOD A 7 1008 1008 DOD DOD . C 3 DOD A 8 1009 1009 DOD DOD . C 3 DOD A 9 1010 1010 DOD DOD . C 3 DOD A 10 1011 1011 DOD DOD . C 3 DOD A 11 1012 1012 DOD DOD . C 3 DOD A 12 1013 1013 DOD DOD . C 3 DOD A 13 1014 1014 DOD DOD . C 3 DOD A 14 1015 1015 DOD DOD . C 3 DOD A 15 1016 1016 DOD DOD . C 3 DOD A 16 1017 1017 DOD DOD . C 3 DOD A 17 1019 1019 DOD DOD . C 3 DOD A 18 1020 1020 DOD DOD . C 3 DOD A 19 1021 1021 DOD DOD . C 3 DOD A 20 1022 1022 DOD DOD . C 3 DOD A 21 1023 1023 DOD DOD . C 3 DOD A 22 1025 1025 DOD DOD . C 3 DOD A 23 1027 1027 DOD DOD . C 3 DOD A 24 1028 1028 DOD DOD . C 3 DOD A 25 1029 1029 DOD DOD . C 3 DOD A 26 1031 1031 DOD DOD . C 3 DOD A 27 1032 1032 DOD DOD . C 3 DOD A 28 1033 1033 DOD DOD . C 3 DOD A 29 1034 1034 DOD DOD . C 3 DOD A 30 1035 1035 DOD DOD . C 3 DOD A 31 1036 1036 DOD DOD . C 3 DOD A 32 1037 1037 DOD DOD . C 3 DOD A 33 1038 1038 DOD DOD . C 3 DOD A 34 1039 1039 DOD DOD . C 3 DOD A 35 1040 1040 DOD DOD . C 3 DOD A 36 1041 1041 DOD DOD . C 3 DOD A 37 1043 1043 DOD DOD . C 3 DOD A 38 1044 1044 DOD DOD . C 3 DOD A 39 1046 1046 DOD DOD . C 3 DOD A 40 1047 1047 DOD DOD . C 3 DOD A 41 1048 1048 DOD DOD . C 3 DOD A 42 1049 1049 DOD DOD . C 3 DOD A 43 1050 1050 DOD DOD . C 3 DOD A 44 1051 1051 DOD DOD . C 3 DOD A 45 1053 1053 DOD DOD . C 3 DOD A 46 1054 1054 DOD DOD . C 3 DOD A 47 1055 1055 DOD DOD . C 3 DOD A 48 1056 1056 DOD DOD . C 3 DOD A 49 1057 1057 DOD DOD . C 3 DOD A 50 1058 1058 DOD DOD . C 3 DOD A 51 1060 1060 DOD DOD . C 3 DOD A 52 1061 1061 DOD DOD . C 3 DOD A 53 1062 1062 DOD DOD . C 3 DOD A 54 1063 1063 DOD DOD . C 3 DOD A 55 1064 1064 DOD DOD . C 3 DOD A 56 1065 1065 DOD DOD . C 3 DOD A 57 1066 1066 DOD DOD . C 3 DOD A 58 1067 1067 DOD DOD . C 3 DOD A 59 1068 1068 DOD DOD . C 3 DOD A 60 1069 1069 DOD DOD . C 3 DOD A 61 1070 1070 DOD DOD . C 3 DOD A 62 1071 1071 DOD DOD . C 3 DOD A 63 1072 1072 DOD DOD . C 3 DOD A 64 1073 1073 DOD DOD . C 3 DOD A 65 1074 1074 DOD DOD . C 3 DOD A 66 1075 1075 DOD DOD . C 3 DOD A 67 1076 1076 DOD DOD . C 3 DOD A 68 1077 1077 DOD DOD . C 3 DOD A 69 1078 1078 DOD DOD . C 3 DOD A 70 1079 1079 DOD DOD . C 3 DOD A 71 1082 1082 DOD DOD . C 3 DOD A 72 1084 1084 DOD DOD . C 3 DOD A 73 1085 1085 DOD DOD . C 3 DOD A 74 1086 1086 DOD DOD . C 3 DOD A 75 1087 1087 DOD DOD . C 3 DOD A 76 1089 1089 DOD DOD . C 3 DOD A 77 1091 1091 DOD DOD . C 3 DOD A 78 1092 1092 DOD DOD . C 3 DOD A 79 1093 1093 DOD DOD . C 3 DOD A 80 1094 1094 DOD DOD . C 3 DOD A 81 1095 1095 DOD DOD . C 3 DOD A 82 1096 1096 DOD DOD . C 3 DOD A 83 1097 1097 DOD DOD . C 3 DOD A 84 1098 1098 DOD DOD . C 3 DOD A 85 1100 1100 DOD DOD . C 3 DOD A 86 1102 1102 DOD DOD . C 3 DOD A 87 1103 1103 DOD DOD . C 3 DOD A 88 1105 1105 DOD DOD . C 3 DOD A 89 1106 1106 DOD DOD . C 3 DOD A 90 1107 1107 DOD DOD . C 3 DOD A 91 1108 1108 DOD DOD . C 3 DOD A 92 1109 1109 DOD DOD . C 3 DOD A 93 1110 1110 DOD DOD . C 3 DOD A 94 1111 1111 DOD DOD . C 3 DOD A 95 1113 1113 DOD DOD . C 3 DOD A 96 1114 1114 DOD DOD . C 3 DOD A 97 1115 1115 DOD DOD . C 3 DOD A 98 1118 1118 DOD DOD . C 3 DOD A 99 1121 1121 DOD DOD . C 3 DOD A 100 1124 1124 DOD DOD . C 3 DOD A 101 1125 1125 DOD DOD . C 3 DOD A 102 1126 1126 DOD DOD . C 3 DOD A 103 1127 1127 DOD DOD . C 3 DOD A 104 1128 1128 DOD DOD . C 3 DOD A 105 1129 1129 DOD DOD . C 3 DOD A 106 1130 1130 DOD DOD . C 3 DOD A 107 1131 1131 DOD DOD . C 3 DOD A 108 1133 1133 DOD DOD . C 3 DOD A 109 1134 1134 DOD DOD . C 3 DOD A 110 1135 1135 DOD DOD . C 3 DOD A 111 1136 1136 DOD DOD . C 3 DOD A 112 1139 1139 DOD DOD . C 3 DOD A 113 1140 1140 DOD DOD . C 3 DOD A 114 1142 1142 DOD DOD . C 3 DOD A 115 1144 1144 DOD DOD . C 3 DOD A 116 1145 1145 DOD DOD . C 3 DOD A 117 1146 1146 DOD DOD . C 3 DOD A 118 1147 1147 DOD DOD . C 3 DOD A 119 1149 1149 DOD DOD . C 3 DOD A 120 1151 1151 DOD DOD . C 3 DOD A 121 1154 1154 DOD DOD . C 3 DOD A 122 1157 1157 DOD DOD . C 3 DOD A 123 1158 1158 DOD DOD . C 3 DOD A 124 1159 1159 DOD DOD . C 3 DOD A 125 1160 1160 DOD DOD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B BZB . . . B 2 -39.249 16.849 9.468 0.87 8.14 ? B BZB 300 A 1 HETATM 2 O O1 BZB . . . B 2 -38.207 17.357 10.324 0.87 5.57 ? O1 BZB 300 A 1 HETATM 3 O O2 BZB . . . B 2 -38.879 15.777 8.571 0.87 11.01 ? O2 BZB 300 A 1 HETATM 4 C C1 BZB . . . B 2 -40.659 16.729 10.136 0.87 14.88 ? C1 BZB 300 A 1 HETATM 5 C C2 BZB . . . B 2 -41.748 15.984 9.765 0.87 9.24 ? C2 BZB 300 A 1 HETATM 6 C C8 BZB . . . B 2 -42.862 16.829 11.638 0.87 19.55 ? C8 BZB 300 A 1 HETATM 7 C C3 BZB . . . B 2 -42.889 16.008 10.503 0.87 14.84 ? C3 BZB 300 A 1 HETATM 8 C C7 BZB . . . B 2 -43.965 16.954 12.493 0.87 23.62 ? C7 BZB 300 A 1 HETATM 9 S S BZB . . . B 2 -41.243 17.498 11.582 0.87 10.22 ? S BZB 300 A 1 HETATM 10 C C4 BZB . . . B 2 -44.088 15.317 10.272 0.87 16.44 ? C4 BZB 300 A 1 HETATM 11 C C6 BZB . . . B 2 -45.12 16.257 12.224 0.87 21.69 ? C6 BZB 300 A 1 HETATM 12 C C5 BZB . . . B 2 -45.171 15.45 11.122 0.87 22.96 ? C5 BZB 300 A 1 HETATM 13 D DC21 BZB . . . B 2 -41.704 15.434 8.967 0.87 11.09 ? DC21 BZB 300 A 1 HETATM 14 D DC71 BZB . . . B 2 -43.915 17.531 13.271 0.87 28.35 ? DC71 BZB 300 A 1 HETATM 15 D DC41 BZB . . . B 2 -44.16 14.736 9.499 0.87 19.73 ? DC41 BZB 300 A 1 HETATM 16 D DC61 BZB . . . B 2 -45.889 16.337 12.81 0.87 26.02 ? DC61 BZB 300 A 1 HETATM 17 D DC51 BZB . . . B 2 -45.985 14.958 10.933 0.87 27.55 ? DC51 BZB 300 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 17 #